For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_0288 (-)

annotation: hypothetical protein MMAR_0288
coordinates: 330953 - 331903
length: 316

MATELTAGVDFDTGVREALPMPIDRPVDDEIVAQRLGPTSLIWKFYGDVRTQLFGFQRAAGTENCIEQLG
QGVLDHSVVFSDTLGRAKRTGPPLMRTVYSEDPHGWGRTVRDFHKPIKGTIGDGSRYHALNPELFYWAHA
TFVDQILYNTDTFIRRLSRAEKEQIFEESKIWYGLYGVSDRSQPQTYDEFVAYWDGMLDRFVPHKTVLYG
TGYLRKGIPGPRKLPALIWRILSAPLNAYARLVIVGTLPPQMREVCDLDWNAKKERRFQRFAALIRGLNP
VLGRLPVRLIYLPWAAQAWTRSGVDPRRLHRRAVST
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_0288--100% (316)hypothetical protein MMAR_0288
M. marinum MMMAR_2452-1e-3936.44% (247) hypothetical protein MMAR_2452
M. marinum MMMAR_4854-1e-3634.56% (272) hypothetical protein MMAR_4854

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1672c-1e-4036.84% (247) hypothetical protein Mb1672c
M. gilvum PYR-GCKMflv_0060-4e-7248.73% (275) hypothetical protein Mflv_0060
M. tuberculosis H37RvRv1645c-1e-4036.84% (247) hypothetical protein Rv1645c
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4646-1e-12968.30% (306) hypothetical protein MAB_4646
M. avium 104MAV_5226-1e-15078.16% (316) hypothetical protein MAV_5226
M. smegmatis MC2 155MSMEG_3781-2e-3935.27% (292) hypothetical protein MSMEG_3781
M. thermoresistible (build 8)TH_4628-1e-7952.22% (270) PUTATIVE conserved hypothetical protein
M. ulcerans Agy99MUL_4835-0.098.42% (316) hypothetical protein MUL_4835
M. vanbaalenii PYR-1Mvan_0854-9e-7349.26% (272) hypothetical protein Mvan_0854

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_0288|M.marinum_M               --------MATELTAGVDFDTGVREALPMPI-DRP---VDDEIVAQRLGP
MUL_4835|M.ulcerans_Agy99           --------MATELTAGVDFDTGVREALPMPI-DRP---VDDEIVAQRLGP
MAV_5226|M.avium_104                ---------MTAQRAAWDFDNGVREAVPMPN-DGPDWSARDAADAPRLGP
MAB_4646|M.abscessus_ATCC_1997      ----------MVDQSALTLDEGLREAIPMPVEDKP------DEPSLRLGA
Mflv_0060|M.gilvum_PYR-GCK          ----------------------MTELADKNGHLDG-----ADTDALPLGP
Mvan_0854|M.vanbaalenii_PYR-1       MRAVNLVTASLVQSAESVTLLPMTELAQQTEHLD---------DALPLGP
TH_4628|M.thermoresistible__bu      ----------------------MTELVETPQDARR-----DTPDALPLGP
Mb1672c|M.bovis_AF2122/97           ----------------------------MTVASRT--------SADPLGP
Rv1645c|M.tuberculosis_H37Rv        ----------------------------MTVASRT--------SADPLGP
MSMEG_3781|M.smegmatis_MC2_155      -------------------------MATRATSTDT--------ASDPLGL
                                                                                :  ** 

MMAR_0288|M.marinum_M               TSLIWKFYGDVRTQLFGFQRAAGTENCIEQLGQGVLDHSVVFSDTLGRAK
MUL_4835|M.ulcerans_Agy99           TSLIWKFYGDVRTQLFGFQRAAGTENCIEQLGQGVLDHSVVFSDTLGRAK
MAV_5226|M.avium_104                DSLIWKFYGDNRTQLFGFQRTAGVENCIEQLAQGVLDHSVIFSDTLGRAK
MAB_4646|M.abscessus_ATCC_1997      DSLVWKFYGDIR-GVLGFQRLAGTENCIEQLGKAVEDHSVIFTDTIGRAR
Mflv_0060|M.gilvum_PYR-GCK          QSLVWRYFGDNRMYLIG-PRPAVLQNMLAELGQGVYDHSTFFADTAERLK
Mvan_0854|M.vanbaalenii_PYR-1       QSLVWKYFGDNRMYLIG-PRPAVLQNMLAELGQGVYDHSTFFADTAERLK
TH_4628|M.thermoresistible__bu      DSLVWRYFGDNRMPLIG-PRPAVLQNMLAELGQGVLDHSVFFSDTAARVR
Mb1672c|M.bovis_AF2122/97           DSLTWKYFGDLRTGMMG-VWIGAIQNMYPELGAGVEEHSILLREPLQRVA
Rv1645c|M.tuberculosis_H37Rv        DSLTWKYFGDLRTGMMG-VWIGAIQNMYPELGAGVEEHSILLREPLQRVA
MSMEG_3781|M.smegmatis_MC2_155      DSLTWKYFGDLRTGMLG-VWIGAIQNMYPELGAGVEEHSILLREPLQRVA
                                     ** *:::** *  ::*    .  :*   :*. .* :** .: :.  *  

MMAR_0288|M.marinum_M               RTGPPLMRTVYSED-PHGWGRTVRDFHKPIKGTIG--DG---SRYHALNP
MUL_4835|M.ulcerans_Agy99           RTGSPLMRPVYSED-PHGWGRTVRDFHKPIKGTIG--DG---SRYHALNP
MAV_5226|M.avium_104                RTAPPLMNTVYSDD-PQEWGRKVRDFHKTIKGTIS--DG---SRYHALNP
MAB_4646|M.abscessus_ATCC_1997      RSGPPIMKTIYSAD-PQKWGRMVRDFHKPITGTIS--DG---TRYHALNP
Mflv_0060|M.gilvum_PYR-GCK          RTIPPILNTVYGSD-EENAGLQVRDFHHHVKGVMPGPDGEEAGRYHALDP
Mvan_0854|M.vanbaalenii_PYR-1       RTIPPIFNTVYGSD-ENNAGLQVRDFHHHVKGEMPGTDG---ARYHALDP
TH_4628|M.thermoresistible__bu      RSLPPIFMTVYGSD-DENPGRQVRDYHTEIKGTMP--DG---QRYHALDP
Mb1672c|M.bovis_AF2122/97           RSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDA--EG---RRYHALNP
Rv1645c|M.tuberculosis_H37Rv        RSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDA--EG---RRYHALNP
MSMEG_3781|M.smegmatis_MC2_155      RSVYPIMGVVYDGDRAPETGAQIKGFHKTIKGVDS--SG---RRYHALNP
                                    *:  *::  :*. *     *  ::.:*  :.*     .*    *****:*

MMAR_0288|M.marinum_M               ELFYWAHATFVDQILYNTDTFIRRLSRAEKEQIFEESKIWYGLYGVSDRS
MUL_4835|M.ulcerans_Agy99           ELFYWAHATFVDQILYNTDTFIRRLSRAEKEQIFEESKIWYGLYGVSDRS
MAV_5226|M.avium_104                ELFYWAHASFVDQVIYNTDTFIRRLTRAEKEQIFNEGKVWYSLYGVSDRG
MAB_4646|M.abscessus_ATCC_1997      ELFYWAHATFVDQVLYITDTFIRRLSYEEKVRIFEESKVWYSLYGVSARN
Mflv_0060|M.gilvum_PYR-GCK          ETYFWAHATFVEQVYYFADTFVKRLTDAEREQIWLESKTWYRRYGVSDRV
Mvan_0854|M.vanbaalenii_PYR-1       ETYFWAHATFVEQIYYFADTFVKRLTDAEREQIWLESKTWYRRYGVSDRP
TH_4628|M.thermoresistible__bu      ETYFWAHATFVDQVLYFADTFVKRLTRAEKEQIYLESKTWYRRYGVSDRV
Mb1672c|M.bovis_AF2122/97           DTFYWAHATFFMLVIKVAEYFCGGLTEAEKHQLFEEHVRWYRMYGMSMRP
Rv1645c|M.tuberculosis_H37Rv        DTFYWAHATFFMLVIKVAEYFCGGLTEAEKHQLFEEHVRWYRMYGMSMRP
MSMEG_3781|M.smegmatis_MC2_155      ETFYWAHATFFMLIIKTAEYFCGGLTEAEKRQLFDEHVQWYRMYGMSMRP
                                    : ::****:*.  :   :: *   *:  *: ::: *   **  **:* * 

MMAR_0288|M.marinum_M               QPQTYDEFVAYWDGMLDR-FVPHKTVLYGTGYLRKGIPGPRKLPALIWRI
MUL_4835|M.ulcerans_Agy99           QPQTYDEFVAYWDGMLDR-FVPHKTVLYGTGYLRKGIPGPRKLPALIWRI
MAV_5226|M.avium_104                QPQTYDDFLAYWDEMLDR-FVPHKTVLYGTGYLRKGIPGPRWMPRPVWKI
MAB_4646|M.abscessus_ATCC_1997      QPQTYDEFVTYMESMFDR-FVPTKTILYATGYIRQGLPGPRQIPRPLWKV
Mflv_0060|M.gilvum_PYR-GCK          MPATYAEFVQYWDRMMDQVVVAHPTAKYGVGYVTKGFPKPKAVHPLVWRL
Mvan_0854|M.vanbaalenii_PYR-1       MPATYAEFEQYWDRMMDQVVVAHPSAKYGVGYVTKGFPKPKAVHPLVWRL
TH_4628|M.thermoresistible__bu      MPATYDEFERYWDRMLDEIIVAHKTAKYGVGYVTKGFPCPKGVHPAVWKV
Mb1672c|M.bovis_AF2122/97           VPKSWEDFQDYWDRVCRD-KLEINQATVDILQMRIPKPRFVLMPTPIWDQ
Rv1645c|M.tuberculosis_H37Rv        VPKSWEDFQDYWDRVCRD-KLEINQATVDILQMRIPKPRFVLMPTPIWDQ
MSMEG_3781|M.smegmatis_MC2_155      VPQTWEEFQDYWDAKCRD-ELEINRATLDIFSIRIPKPWFVLMPTPIWDQ
                                     * :: :*  * :       :           :    *    :   :*  

MMAR_0288|M.marinum_M               LSAPLNAYARLVIVGTLPPQMREVCDLDWNAKKERRFQRFAALIRG--LN
MUL_4835|M.ulcerans_Agy99           LSAPLNAYARLVIVGTLPPQMREVCDLDWNAKKERRFQRSAALIRG--LN
MAV_5226|M.avium_104                VSAPLNAYARLVVVGTLPPQMREVCQLRWDAKKEKRFQRFAALMRA--LN
MAB_4646|M.abscessus_ATCC_1997      LSAPLNAFIRTVVVGTLPPQMKDVCRLQWSDKKERNFRRFAALMRA--LN
Mflv_0060|M.gilvum_PYR-GCK          VAPVFNPLAAFLTTGGLPPRARMLLGLPWSDKQERRYQRFAAFWRSRPVN
Mvan_0854|M.vanbaalenii_PYR-1       VAPVFNPLAAFLTTGGLPPRARMLLGLPWTDKQERRYQRFAAIWRSRPVN
TH_4628|M.thermoresistible__bu      ISVVFDPVAAFLTTGGLPPRARTLLNLPWSEKQERRYQRFAAFCRSRPVN
Mb1672c|M.bovis_AF2122/97           LFKPLIAGQRWIAAGLFDPAVREKAGMHWTPGDEVLLRVFGKVVEL----
Rv1645c|M.tuberculosis_H37Rv        LFKPLIAGQRWIAAGLFDPAVREKAGMHWTPGDEVLLRVFGKVVEL----
MSMEG_3781|M.smegmatis_MC2_155      LFKPLVGAQRWIAAGLFDPVVREKAGMRWTPGDEVLLRIFGKAVEL----
                                    :   :      : .* : *  :    : *   .*   :  .   .     

MMAR_0288|M.marinum_M               PVLGRLPVRLIYLPWAAQAWTRSGVDPRRLHRRAVST-------------
MUL_4835|M.ulcerans_Agy99           PVLGRLPVRLIDLPWAAQARTRSGVDPRRLHRRAVST-------------
MAV_5226|M.avium_104                PLINRLPVRVLYTPWAAQAWSRAGVDPRRLHNRAAA--------------
MAB_4646|M.abscessus_ATCC_1997      PVFNRLPVRWLYLPWAAEGWKREGVDPRPLHNRVA---------------
Mflv_0060|M.gilvum_PYR-GCK          WVWDRLPMTVRYSGYAVKGFTRSDMRSDVRA-------------------
Mvan_0854|M.vanbaalenii_PYR-1       WIWDRLPMRVRYSGYAVKGYARN---------------------------
TH_4628|M.thermoresistible__bu      WVWDRLPMKVRYNKYARRGYARAA--------------------------
Mb1672c|M.bovis_AF2122/97           -AFLAVPDEIRLHPRALAAYRRAAGRTRHDAPLVQAPGFMAPPRDRQGLP
Rv1645c|M.tuberculosis_H37Rv        -AFLAVPDEIRLHPRALAAYRRAAGRTRHDAPLVQAPGFMAPPRDRQGLP
MSMEG_3781|M.smegmatis_MC2_155      -AFLAVPDEIRLHPRAVSAYRRAKGRIPADAPLVEAPGFTAPPKDRRGLP
                                         :*        *  .  *                            

MMAR_0288|M.marinum_M               --------------------------------------------------
MUL_4835|M.ulcerans_Agy99           --------------------------------------------------
MAV_5226|M.avium_104                --------------------------------------------------
MAB_4646|M.abscessus_ATCC_1997      --------------------------------------------------
Mflv_0060|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_0854|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_4628|M.thermoresistible__bu      --------------------------------------------------
Mb1672c|M.bovis_AF2122/97           MHYFPPRSHRFTRSALDPAKALMERAGALVHSTLSLAGVRPAR--GPSRA
Rv1645c|M.tuberculosis_H37Rv        MHYFPPRSHRFTRSALDPAKALMERAGALVHSTLSLAGVRPAR--GPSRA
MSMEG_3781|M.smegmatis_MC2_155      MHYLPQR------------RSLLDRAGALVHSTLSLPALRPAKKSSPRRS
                                                                                      

MMAR_0288|M.marinum_M               --
MUL_4835|M.ulcerans_Agy99           --
MAV_5226|M.avium_104                --
MAB_4646|M.abscessus_ATCC_1997      --
Mflv_0060|M.gilvum_PYR-GCK          --
Mvan_0854|M.vanbaalenii_PYR-1       --
TH_4628|M.thermoresistible__bu      --
Mb1672c|M.bovis_AF2122/97           A-
Rv1645c|M.tuberculosis_H37Rv        A-
MSMEG_3781|M.smegmatis_MC2_155      AA