For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVDQSALTLDEGLREAIPMPVEDKPDEPSLRLGADSLVWKFYGDIRGVLGFQRLAGTENCIEQLGKAVED HSVIFTDTIGRARRSGPPIMKTIYSADPQKWGRMVRDFHKPITGTISDGTRYHALNPELFYWAHATFVDQ VLYITDTFIRRLSYEEKVRIFEESKVWYSLYGVSARNQPQTYDEFVTYMESMFDRFVPTKTILYATGYIR QGLPGPRQIPRPLWKVLSAPLNAFIRTVVVGTLPPQMKDVCRLQWSDKKERNFRRFAALMRALNPVFNRL PVRWLYLPWAAEGWKREGVDPRPLHNRVA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4646 | - | - | 100% (309) | hypothetical protein MAB_4646 |
M. abscessus ATCC 19977 | MAB_0757 | - | 5e-38 | 33.33% (297) | hypothetical protein MAB_0757 |
M. abscessus ATCC 19977 | MAB_3263c | - | 5e-35 | 35.05% (291) | hypothetical protein MAB_3263c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0849 | - | 2e-39 | 34.91% (275) | hypothetical protein Mb0849 |
M. gilvum PYR-GCK | Mflv_0060 | - | 3e-61 | 41.84% (282) | hypothetical protein Mflv_0060 |
M. tuberculosis H37Rv | Rv0826 | - | 3e-40 | 35.27% (275) | hypothetical protein Rv0826 |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_0288 | - | 1e-129 | 68.30% (306) | hypothetical protein MMAR_0288 |
M. avium 104 | MAV_5226 | - | 1e-128 | 68.15% (314) | hypothetical protein MAV_5226 |
M. smegmatis MC2 155 | MSMEG_5767 | - | 4e-40 | 36.10% (277) | hypothetical protein MSMEG_5767 |
M. thermoresistible (build 8) | TH_4628 | - | 4e-71 | 46.18% (288) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4835 | - | 1e-124 | 66.67% (306) | hypothetical protein MUL_4835 |
M. vanbaalenii PYR-1 | Mvan_0854 | - | 1e-61 | 41.82% (275) | hypothetical protein Mvan_0854 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0288|M.marinum_M --------MATELTAGVDFDTG------------------VREALPMPI- MUL_4835|M.ulcerans_Agy99 --------MATELTAGVDFDTG------------------VREALPMPI- MAV_5226|M.avium_104 ---------MTAQRAAWDFDNG------------------VREAVPMPN- MAB_4646|M.abscessus_ATCC_1997 ----------MVDQSALTLDEG------------------LREAIPMPVE Mflv_0060|M.gilvum_PYR-GCK ----------------------------------------MTELADKNGH Mvan_0854|M.vanbaalenii_PYR-1 MRAVNLVTASLVQSAESVTLLP------------------MTELAQQTEH TH_4628|M.thermoresistible__bu ----------------------------------------MTELVETPQD Mb0849|M.bovis_AF2122/97 ---------MTQDTSATCPLTSTVQDSSPVAGQLGRPIGFRGLAGGCPVS Rv0826|M.tuberculosis_H37Rv ---------MTQDTSATCPLTSTVQDSSPVAGQLGRPIGFRGLAGGCPVS MSMEG_5767|M.smegmatis_MC2_155 ---------MTQDTSETCPVTS----------------GSARPAAGCPAA MMAR_0288|M.marinum_M DRP---VDDEIVAQRLGPTSLIWKFYGDVRTQLFGFQRAAGTENCIEQLG MUL_4835|M.ulcerans_Agy99 DRP---VDDEIVAQRLGPTSLIWKFYGDVRTQLFGFQRAAGTENCIEQLG MAV_5226|M.avium_104 DGPDWSARDAADAPRLGPDSLIWKFYGDNRTQLFGFQRTAGVENCIEQLA MAB_4646|M.abscessus_ATCC_1997 DKP------DEPSLRLGADSLVWKFYGDIR-GVLGFQRLAGTENCIEQLG Mflv_0060|M.gilvum_PYR-GCK LDG-----ADTDALPLGPQSLVWRYFGDNRMYLIG-PRPAVLQNMLAELG Mvan_0854|M.vanbaalenii_PYR-1 LD---------DALPLGPQSLVWKYFGDNRMYLIG-PRPAVLQNMLAELG TH_4628|M.thermoresistible__bu ARR-----DTPDALPLGPDSLVWRYFGDNRMPLIG-PRPAVLQNMLAELG Mb0849|M.bovis_AF2122/97 PLG-----YESPPLPLGPDSLTWRYFGDWRGMLQG-PWAGSMQNMHPQLG Rv0826|M.tuberculosis_H37Rv PLG-----YESPPLPLGPDSLTWRYFGDWRGMLQG-PWAGSMQNMHPQLG MSMEG_5767|M.smegmatis_MC2_155 LGG-----YEAPPEVLGPDSLTWKIFGDWRGLLQG-PWAGSMQNMHPQLG . **. ** *: :** * : * . :* :*. MMAR_0288|M.marinum_M QGVLDHSVVFSDTLGRAKRTGPPLMRTVYSED-PHGWGRTVRDFHKPIKG MUL_4835|M.ulcerans_Agy99 QGVLDHSVVFSDTLGRAKRTGSPLMRPVYSED-PHGWGRTVRDFHKPIKG MAV_5226|M.avium_104 QGVLDHSVIFSDTLGRAKRTAPPLMNTVYSDD-PQEWGRKVRDFHKTIKG MAB_4646|M.abscessus_ATCC_1997 KAVEDHSVIFTDTIGRARRSGPPIMKTIYSAD-PQKWGRMVRDFHKPITG Mflv_0060|M.gilvum_PYR-GCK QGVYDHSTFFADTAERLKRTIPPILNTVYGSD-EENAGLQVRDFHHHVKG Mvan_0854|M.vanbaalenii_PYR-1 QGVYDHSTFFADTAERLKRTIPPIFNTVYGSD-ENNAGLQVRDFHHHVKG TH_4628|M.thermoresistible__bu QGVLDHSVFFSDTAARVRRSLPPIFMTVYGSD-DENPGRQVRDYHTEIKG Mb0849|M.bovis_AF2122/97 AAVEDHSTFFRGRWPRLLRSLYPIGGVVFDGDRAPVTGVQVRDYHITIKG Rv0826|M.tuberculosis_H37Rv AAVEDHSTFFRERWPRLLRSLYPIGGVVFDGDRAPVTGVQVRDYHITIKG MSMEG_5767|M.smegmatis_MC2_155 AAVEEHSIFFRERIPRLLRSLYPIGGVVFDGDRAPQTGAQVRDYHIGIKG .* :** .* * *: *: ::. * * ***:* :.* MMAR_0288|M.marinum_M TIG--DG---SRYHALNPELFYWAHATFVDQILYNTDTFIRRLSRAEKEQ MUL_4835|M.ulcerans_Agy99 TIG--DG---SRYHALNPELFYWAHATFVDQILYNTDTFIRRLSRAEKEQ MAV_5226|M.avium_104 TIS--DG---SRYHALNPELFYWAHASFVDQVIYNTDTFIRRLTRAEKEQ MAB_4646|M.abscessus_ATCC_1997 TIS--DG---TRYHALNPELFYWAHATFVDQVLYITDTFIRRLSYEEKVR Mflv_0060|M.gilvum_PYR-GCK VMPGPDGEEAGRYHALDPETYFWAHATFVEQVYYFADTFVKRLTDAEREQ Mvan_0854|M.vanbaalenii_PYR-1 EMPGTDG---ARYHALDPETYFWAHATFVEQIYYFADTFVKRLTDAEREQ TH_4628|M.thermoresistible__bu TMP--DG---QRYHALDPETYFWAHATFVDQVLYFADTFVKRLTRAEKEQ Mb0849|M.bovis_AF2122/97 VDG--AG---RRYHALNPDVFYWAHATFFVGTLHVAERFCGGLTEAQRRQ Rv0826|M.tuberculosis_H37Rv VDG--AG---RRYHALNPDVFYWAHATFFVGTLHVAERFCGGLTEAQRRQ MSMEG_5767|M.smegmatis_MC2_155 VDS--QG---RRYSALNPDVFYWAHSTFFMGTILTAERFGGGLTEDQKRQ * ** **:*: ::***::*. :: * *: :: : MMAR_0288|M.marinum_M IFEESKIWYGLYGVSDRSQPQTYDEFVAYWDGMLDR-FVPHKTVLYGTGY MUL_4835|M.ulcerans_Agy99 IFEESKIWYGLYGVSDRSQPQTYDEFVAYWDGMLDR-FVPHKTVLYGTGY MAV_5226|M.avium_104 IFNEGKVWYSLYGVSDRGQPQTYDDFLAYWDEMLDR-FVPHKTVLYGTGY MAB_4646|M.abscessus_ATCC_1997 IFEESKVWYSLYGVSARNQPQTYDEFVTYMESMFDR-FVPTKTILYATGY Mflv_0060|M.gilvum_PYR-GCK IWLESKTWYRRYGVSDRVMPATYAEFVQYWDRMMDQVVVAHPTAKYGVGY Mvan_0854|M.vanbaalenii_PYR-1 IWLESKTWYRRYGVSDRPMPATYAEFEQYWDRMMDQVVVAHPSAKYGVGY TH_4628|M.thermoresistible__bu IYLESKTWYRRYGVSDRVMPATYDEFERYWDRMLDEIIVAHKTAKYGVGY Mb0849|M.bovis_AF2122/97 LFDEHVQWYRMYGMSMRPVPATWEEFQDYWDHMCRNVLENNFAARAVLDL Rv0826|M.tuberculosis_H37Rv LFDEHVQWYRMYGMSMRPVPATWEEFQDYWDHMCRNVLENNFAARAVLDL MSMEG_5767|M.smegmatis_MC2_155 LFDEHIVWYRQYGMSMRPVPKTWEEFQEYWDHICRNVLENNYAAREVLDL :: * ** **:* * * *: :* * : : . . : . MMAR_0288|M.marinum_M LRKG-IPGPRKLPALIWRILSAPLNAYARLVIVGTLPPQMREVCDLDWNA MUL_4835|M.ulcerans_Agy99 LRKG-IPGPRKLPALIWRILSAPLNAYARLVIVGTLPPQMREVCDLDWNA MAV_5226|M.avium_104 LRKG-IPGPRWMPRPVWKIVSAPLNAYARLVVVGTLPPQMREVCQLRWDA MAB_4646|M.abscessus_ATCC_1997 IRQG-LPGPRQIPRPLWKVLSAPLNAFIRTVVVGTLPPQMKDVCRLQWSD Mflv_0060|M.gilvum_PYR-GCK VTKG-FPKPKAVHPLVWRLVAPVFNPLAAFLTTGGLPPRARMLLGLPWSD Mvan_0854|M.vanbaalenii_PYR-1 VTKG-FPKPKAVHPLVWRLVAPVFNPLAAFLTTGGLPPRARMLLGLPWTD TH_4628|M.thermoresistible__bu VTKG-FPCPKGVHPAVWKVISVVFDPVAAFLTTGGLPPRARTLLNLPWSE Mb0849|M.bovis_AF2122/97 TELPKPPFAQRVPDWLWAAPRKLLARFFVWLTVGLYDPPVRELMGYRWLR Rv0826|M.tuberculosis_H37Rv TELPKPPFAQRVPDWLWAAPRKLLARFFVWLTVGLYDPPVRELMGYRWLR MSMEG_5767|M.smegmatis_MC2_155 STMPKHPSLEWIPDWLWKLNLKILGPFAVWVTVGLYDPPVRELMGYTWSD * . : :* : : .* * : : * MMAR_0288|M.marinum_M KKERRFQRFAALIRG--LNPVLGRLPVRLIYLPWAAQAWTRSGVDPRRLH MUL_4835|M.ulcerans_Agy99 KKERRFQRSAALIRG--LNPVLGRLPVRLIDLPWAAQARTRSGVDPRRLH MAV_5226|M.avium_104 KKEKRFQRFAALMRA--LNPLINRLPVRVLYTPWAAQAWSRAGVDPRRLH MAB_4646|M.abscessus_ATCC_1997 KKERNFRRFAALMRA--LNPVFNRLPVRWLYLPWAAEGWKREGVDPRPLH Mflv_0060|M.gilvum_PYR-GCK KQERRYQRFAAFWRSRPVNWVWDRLPMTVRYSGYAVKGFTRSDMRSDVRA Mvan_0854|M.vanbaalenii_PYR-1 KQERRYQRFAAIWRSRPVNWIWDRLPMRVRYSGYAVKGYARN-------- TH_4628|M.thermoresistible__bu KQERRYQRFAAFCRSRPVNWVWDRLPMKVRYNKYARRGYARAA------- Mb0849|M.bovis_AF2122/97 RDEWLHRRFGDIVQL-----VFALVPFRFRKHPRARAGWDRATGRIPADA Rv0826|M.tuberculosis_H37Rv RDEWLHRRFGDIVRL-----VFALVPFRFRKHPRARAGWDRATGRIPADA MSMEG_5767|M.smegmatis_MC2_155 RDEKLHRLFGKAVHY-----TFKMLPERRRRHPRARAGWDRAQGRIPADA :.* .: . : :* * . * MMAR_0288|M.marinum_M RRAVST---------------------- MUL_4835|M.ulcerans_Agy99 RRAVST---------------------- MAV_5226|M.avium_104 NRAAA----------------------- MAB_4646|M.abscessus_ATCC_1997 NRVA------------------------ Mflv_0060|M.gilvum_PYR-GCK ---------------------------- Mvan_0854|M.vanbaalenii_PYR-1 ---------------------------- TH_4628|M.thermoresistible__bu ---------------------------- Mb0849|M.bovis_AF2122/97 PLVQTPARNLPPPDERDNPTHYCPKV-- Rv0826|M.tuberculosis_H37Rv PLVQTPARNLPPPDERDNPTHYCPKV-- MSMEG_5767|M.smegmatis_MC2_155 PLVETPARNLPPLDARDSPWHYCPAVTK