For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LTLVAASSTGRVVHTSPSEAPPASMTPHASLVPESTSPAEDFTTISKLVNDAIAARGLPGAVVMVGHGGK VVFHQAYGSRKLAGEPGLDGAPAPAEPMTEDTIFDLASLTKCLATAVAVMQLYEQGKVAFDDPVQKYLPA FNTTNDPQRAKVTIRMLLTNTSGEGIDVSLRDPWGLAGPDKAEGIHRALTTPLQSAPAGEFRYSDINYLL LGALLEKITGEDEDDYVQHHVFGPLGMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPMTECPEWTWRTTL LPRIAPTARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRP SDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSGTPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIG SFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVATAAARALHLYGAAPP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3991 | - | - | 100% (481) | beta-lactamase |
M. avium 104 | MAV_1030 | - | 2e-13 | 27.78% (252) | penicillin-binding protein 4 |
M. avium 104 | MAV_3395 | - | 2e-11 | 30.33% (211) | beta-lactamase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1759c | - | 6e-19 | 28.00% (275) | penicillin-binding protein |
M. gilvum PYR-GCK | Mflv_0495 | - | 1e-160 | 62.04% (461) | beta-lactamase |
M. tuberculosis H37Rv | Rv1730c | - | 6e-19 | 28.00% (275) | penicillin-binding protein |
M. leprae Br4923 | MLBr_00119 | lipE | 9e-07 | 26.70% (191) | putative hydrolase |
M. abscessus ATCC 19977 | MAB_4800 | - | 1e-164 | 62.45% (466) | putative beta-lactamase |
M. marinum M | MMAR_3399 | - | 0.0 | 73.15% (447) | hypothetical protein MMAR_3399 |
M. smegmatis MC2 155 | MSMEG_6805 | - | 1e-161 | 59.38% (485) | beta-lactamase |
M. thermoresistible (build 8) | TH_4016 | - | 1e-156 | 63.47% (438) | PUTATIVE beta-lactamase |
M. ulcerans Agy99 | MUL_1772 | - | 3e-11 | 27.75% (209) | beta-lactamase |
M. vanbaalenii PYR-1 | Mvan_5895 | - | 1e-173 | 63.71% (485) | beta-lactamase |
CLUSTAL 2.0.9 multiple sequence alignment MAV_3991|M.avium_104 --------------------------------------MLTLVAASSTGR MMAR_3399|M.marinum_M --------------------------------------MPAMDAAG---- MAB_4800|M.abscessus_ATCC_1997 -------------------------------MKVPGSHATRVCAVATVLL Mvan_5895|M.vanbaalenii_PYR-1 ---------------------------------MPGSRVARLCAAGSLLL TH_4016|M.thermoresistible__bu -------------------------------------------------- Mflv_0495|M.gilvum_PYR-GCK ---------------------------------MTRS-STRLRRLGAAGA MSMEG_6805|M.smegmatis_MC2_155 MSAGSAPLVTPRRKNALHAATASRTARYRRPVRLSRSRVPRLCAIGAVFA Mb1759c|M.bovis_AF2122/97 --------------------------------MCPPIILSSATPTGTRCG Rv1730c|M.tuberculosis_H37Rv --------------------------------MCPPIILSSATPTGTRCG MUL_1772|M.ulcerans_Agy99 ----------------------------------MGVARPRWRGPRAAWF MLBr_00119|M.leprae_Br4923 ------------------------------------MTSDGKIRVPTDLD MAV_3991|M.avium_104 VVHTSPSEA----------------PPASMTPHASLVPESTSPAEDFTTI MMAR_3399|M.marinum_M -------------------------------------------LAAFAPV MAB_4800|M.abscessus_ATCC_1997 ALAGIPSCG-RPAQP--------------ITAPS------IVPTGPFAPI Mvan_5895|M.vanbaalenii_PYR-1 TLATAPSCG-QPGHPTDPPPPSTGTPTATATATA------TDPVADFAAV TH_4016|M.thermoresistible__bu -------------------------------------------------V Mflv_0495|M.gilvum_PYR-GCK VVLALGACGDRPEPPGTSAVRPPATPTRVLPSPPPPVPE-VTPTGDFSAV MSMEG_6805|M.smegmatis_MC2_155 VVAATSCSRPAPAPREPAPATGIAAASPAPTAPPTQVTQPVTPTGDFSAV Mb1759c|M.bovis_AF2122/97 TRHGRAVVTEYVRALDR--------LPHEIATAVVETVNCADPGAAFDEL Rv1730c|M.tuberculosis_H37Rv TRHGRAVVTEYVRALDR--------LPHEIATAVVETVNCADPGAAFDEL MUL_1772|M.ulcerans_Agy99 AGARKPSDG---------------------RRLTRRPPAANLNPVNLDAN MLBr_00119|M.leprae_Br4923 AVTAIGDED-----------------------------HSDIDSAAVERI MAV_3991|M.avium_104 SKLVNDAIAARGLPGAVVMVGHGGKVVFHQAYGSRKLAGEPGLDGAPAPA MMAR_3399|M.marinum_M SRLINDAIAAERLPGAVVVVGHGGKIVFHQAYGSRKLAGEQGLDGVSAPA MAB_4800|M.abscessus_ATCC_1997 TTLVNDAVAAPRLPGAVVEIGHAGKIVFRQAFGWRKLPDEPGLNGSPAPA Mvan_5895|M.vanbaalenii_PYR-1 SQLMHDAIAAHRLPGAVVQIGHAGKIVFRQAFGSRKLAGEPGLDGSPAPA TH_4016|M.thermoresistible__bu IGQVDDAVAVRRLPGAVVQIGHAGEVVFRQAFGSRKLAGEPGPTGEPTPA Mflv_0495|M.gilvum_PYR-GCK ARLVEDAIAARRLPGAVVQVGHAGKVVFRRAFGVRKLESEPGLDGAPAPA MSMEG_6805|M.smegmatis_MC2_155 TRLVDDAVAARRLPGAVVQIGHAGKIVFRAAFGARKLDGEPGLDGSPSPA Mb1759c|M.bovis_AF2122/97 DAKINAGMKAYAIPGVAVAV-WAGGQEYVKGYGVTNVDHPMPVDG----- Rv1730c|M.tuberculosis_H37Rv DAKINAGMKAYAIPGVAVAV-WAGGQEYVKGYGVTNVDHPMPVDG----- MUL_1772|M.ulcerans_Agy99 QADIREVCDAGLLSGAVTVVWQHGEVLQVNEIGYRDVEAGLPMQR----- MLBr_00119|M.leprae_Br4923 WQATRHWYQAGMHPAIQLCIRQHGRVVLNRAIGHG--WGNAPTDPHDAEK . .. : * * MAV_3991|M.avium_104 EPMTEDTIFDLASLTKCLATAVAVMQLYEQGKVAFDDPVQKYLPAFN--- MMAR_3399|M.marinum_M EAMTEDTIFDIASLTKCLATATAIMQLYEQGKVGFDDPVQNHLPGFN--- MAB_4800|M.abscessus_ATCC_1997 EPMTDDTIFDIASLTKPLATSVAVLQLYEGGRVHIDEPVQAYLPDFN--- Mvan_5895|M.vanbaalenii_PYR-1 EPMTEDTIFDLASLSKSLATAPAFLQLYERGLVRIDEPVQTYLPEFN--- TH_4016|M.thermoresistible__bu EPMTEDTMFDLASLTKSLATTVAVLQLAEQGRLRVDDPVQSHLPEFN--- Mflv_0495|M.gilvum_PYR-GCK EPMTEDTVFDIASLTKSLATATAVMQLHEQGRVRIDEPVQTYLPGFN--- MSMEG_6805|M.smegmatis_MC2_155 EPMTEDTLFDLASLTKSIATTTAVLQLYEQGKIRLDEPVQTYLPDFN--- Mb1759c|M.bovis_AF2122/97 -----DTVFRIGSTTKTFTG-TVMMRLVERGKVDLDSPVRRYIPDFA--- Rv1730c|M.tuberculosis_H37Rv -----DTVFRIGSTTKTFTG-TVMMRLVERGKVDLDSPVRRYIPDFA--- MUL_1772|M.ulcerans_Agy99 -----DTLFRIASMTKPVTVAAAMSMVDE-GKIALRDPITRWAPELRDIR MLBr_00119|M.leprae_Br4923 IPVTTDTPFCAYSAAKAITA-TVVHMLVERGHFSLDDRVCEYLPTYT--- ** * * :* .: .. : * * . . . : * MAV_3991|M.avium_104 ---------TTNDPQRAKVTIRMLLTNTSGEGIDVSLRDPWGLAGP---- MMAR_3399|M.marinum_M ---------PASDPQRAQVTVRMLLTQTSGEPVDVGLQDVWGLDGA---- MAB_4800|M.abscessus_ATCC_1997 ---------PTNDPRRDQVTLRMLLTHTSGIGGDLSHQGPWGLKQA---- Mvan_5895|M.vanbaalenii_PYR-1 ---------PAGDPRRAQVTLRMLLTHTSGLAGDLSLDGPWGLDKP---- TH_4016|M.thermoresistible__bu ---------PQHDPRRARVTLRMLLTHTSGIAGDLSLDGPWGLDRP---- Mflv_0495|M.gilvum_PYR-GCK ---------PAGDPRRAAVTVRMLLTHTSGIAGDLSLDGPWGLAGP---- MSMEG_6805|M.smegmatis_MC2_155 ---------PTGDPRRARVTLRMLLTHTSGIAGDLSLDGPWGLTAA---- Mb1759c|M.bovis_AF2122/97 ---------VADESASATVTVRQLLNHTAGWDGRNGQD--FGRGDD---- Rv1730c|M.tuberculosis_H37Rv ---------VADESASATVTVRQLLNHTAGWDGRNGQD--FGRGDD---- MUL_1772|M.ulcerans_Agy99 VLDDPHGPLDRTHPTRRPILIEDLLTHTSGLAYSFSVSGDISRAYMRLPF MLBr_00119|M.leprae_Br4923 ------------SYGKHRTTIRHVLTHSAGVPFPTGPRPDVTRADD---- :. :*.:::* . MAV_3991|M.avium_104 --DKAEGIHRALTTPLQSAPAGEFRYSDINYLLLG-ALLEKITGEDEDDY MMAR_3399|M.marinum_M --DRVEGIHRALSTPLQSPPGREFRYSDINYILLG-ALLEKIAGEAEDGY MAB_4800|M.abscessus_ATCC_1997 --DKADGIHRALTTPLAFDPGTTFHYSDINFIILG-ALVEKVTGQTLDIY Mvan_5895|M.vanbaalenii_PYR-1 --DKADGIRRALAAWVVFDPGEIFHYSDINFILVG-AIIEKLTGEQLDSY TH_4016|M.thermoresistible__bu --DKAEGVRRALGAWVVHEPGRLFHYSDIGFILLG-AIVEKLTGEPLDVY Mflv_0495|M.gilvum_PYR-GCK --DKADGVRRALGAWVVSDPGEGFHYSDINFIILG-ALVEKITGEPEDSY MSMEG_6805|M.smegmatis_MC2_155 --DKAEGVKRALAAWVVFEPGAMFHYSDIGFIILG-TLVEKITGQSLDGY Mb1759c|M.bovis_AF2122/97 --AVALYVKAMTRLPQLTPPGTAFAYNNSGLVVAG-RIIELVAGTTYEST Rv1730c|M.tuberculosis_H37Rv --AVALYVKAMTRLPQLTPPGTAFAYNNSGLVVAG-RIIELVAGTTYEST MUL_1772|M.ulcerans_Agy99 GHGSDAWLAELAALPLVHQPGERVTYS-HAIDLLG-VIMSRIDDKPFYQV MLBr_00119|M.leprae_Br4923 ---HAYAQQKLSELRPFYRPGLVHIYHALTWGPLMREIIWTATGKEIRDI *. * :: . MAV_3991|M.avium_104 VQHHVFGPLGMHDTRYLP----PAKACGPHIIRGAAIAWAPN--GEPMTE MMAR_3399|M.marinum_M VAQHVFAPIGMQDSDFLP----AAKACGPHSVRGAAIGWAPAPAGRPRAP MAB_4800|M.abscessus_ATCC_1997 VQDNIFAPLGMNETRYLP----AAKACGPHHIVGTAITLEEG--PRAAPD Mvan_5895|M.vanbaalenii_PYR-1 VRDRVFAPLGMTDTRYLP----AAKTCGPHEIRGTTVALGHY--PPWIGQ TH_4016|M.thermoresistible__bu VTENVFAPLGMADTRYLP----VSKACGPIRMVGNAVVEDES--AEPTP- Mflv_0495|M.gilvum_PYR-GCK VDRNVFAPLKMSETRYLP----VTKVCGPHRVRGTAIAADPH--GQAVDN MSMEG_6805|M.smegmatis_MC2_155 VREHVFAPLGMSDTYYLP----AANACGPHEIRGNALVSDPD--GPRTTD Mb1759c|M.bovis_AF2122/97 VQRLLLDPLQLAHTRYFSDQIIGLNVAASHSVVDGKPIAVTDFWTFPRSC Rv1730c|M.tuberculosis_H37Rv VQRLLLDPLQLAHTRYFSDQIIGLNVAASHSVVDGKPIAVTDFWTFPRSC MUL_1772|M.ulcerans_Agy99 LDERILGPAGMTDTGFFV--------------------------STQAQR MLBr_00119|M.leprae_Br4923 LAAEILDPLGFRWTNFGVA-------------------------EEDVPL : :: * : : : MAV_3991|M.avium_104 CPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYY-ALLRGTVHDPTARRM MMAR_3399|M.marinum_M CPAGTWDTALLSHIAPTALDEESGADPSRNPNFN-RLLRGTVHDPTARRM MAB_4800|M.abscessus_ATCC_1997 CATGAWSTALLTRIAPTAHDEDT---PGINPHYG-RLIRGTVHDPTARRM Mvan_5895|M.vanbaalenii_PYR-1 CPAGTWSTALLPRIAPTARDGDT---PGLNPDYG-HLLRGTVHDPTARRM TH_4016|M.thermoresistible__bu CGEDRWSTSLRARIAPTSCDGDT---PDLNPHRG-RLLRGTVHDPTARRM Mflv_0495|M.gilvum_PYR-GCK CPDGTWNIDLLERIAPTALDEDT---PGLNPDYG-YPLRGTVHDPTARRM MSMEG_6805|M.smegmatis_MC2_155 CPADSWSTGLLTRVAPTALDEDT---PGINPHFG-LPLRGTVHDPTARRM Mb1759c|M.bovis_AF2122/97 NPTGGLMSTARDQLRYAQFHLGDGRAPNGEQILSRQSLKAMRSNPGAGGT Rv1730c|M.tuberculosis_H37Rv NPTGGLMSTARDQLRYAQFHLGDGRAPNGEQILSRQSLKAMRSNPGAGGT MUL_1772|M.ulcerans_Agy99 RAATMYRLDELDQLR-----------------------HDVMGPPHVRPP MLBr_00119|M.leprae_Br4923 VALSHATGRPLPPIIAAIFR----------KAIGGTVHEVIPYTNTPPFL : . MAV_3991|M.avium_104 GGVAGNAGVFSTAHDVGVYAQALLDR---LAGRPSDFPLQQGTVELMTTP MMAR_3399|M.marinum_M GGVAGHAGVFSTAHDVSSFAQALLDR---LAGRPSTFPLTQATCELMTTP MAB_4800|M.abscessus_ATCC_1997 GGVAGSAGVFSTAGDVGRYCQALLDR---LAGRPSTFPLKRATLELMTSP Mvan_5895|M.vanbaalenii_PYR-1 GGVTGSAGVFSTVGDVGRFAQALLDG---LAGRPSAFPLTRSTLEMMTTP TH_4016|M.thermoresistible__bu GGVSGSAGVFSTAADVGSYAQALLDR---LAGRPSRFPLRRSTLQMMTSP Mflv_0495|M.gilvum_PYR-GCK GGVAGSAGVFTTVHDMGRFAQALLDR---VAGRPSPFPLSQAGARMMTTP MSMEG_6805|M.smegmatis_MC2_155 GGVAGSAGVFTTVHDLGLFAQALLDR---RANRPSTFPLQQATVELMTTP Mb1759c|M.bovis_AF2122/97 LWVELTGMGVTWMLRPSAENVTIVEHGGTWKGQRSGFVMVPDRNFAMTVL Rv1730c|M.tuberculosis_H37Rv LWVELTGMGVTWMLRPSAENVTIVEHGGTWKGQRSGFVMVPDRNFAMTVL MUL_1772|M.ulcerans_Agy99 SFCNAGGGLWSTADDYLRFVRLLLGD----GTIDGVRVLSPESVRLMRTD MLBr_00119|M.leprae_Br4923 TTIVPSSNTVSTANELSRFAEIWLRG----GELDGIRVLRSETLLGAVAE . : : . : MAV_3991|M.avium_104 QQPGHDPRQLEAANRAARSG------------TPNYPAIKGQNLFG---- MMAR_3399|M.marinum_M QQPGHDMAQLDAANAAAREALAHRPNRTDPMLAPRYPAISGQTLFG---- MAB_4800|M.abscessus_ATCC_1997 AQPGHNDGQLKAANDAARLAIEKTSNSTDPLLAPGYPAIAGQNLRG---- Mvan_5895|M.vanbaalenii_PYR-1 QQPGHTPGQLEAANDAIRTATENDPDST----ARNYPAVPGQDLRG---- TH_4016|M.thermoresistible__bu QQPGHAPGQLDVANKAAREAVLSASDDP--LLAPDYPAVPGRDLRG---- Mflv_0495|M.gilvum_PYR-GCK QQPA-----------------------------------PGRDLRG---- MSMEG_6805|M.smegmatis_MC2_155 QQPG-----------------------------------AGPDLRG---- Mb1759c|M.bovis_AF2122/97 TNSDGGFHMINDLFASDWALQRFAGLSNLPATPQRLGAVDLAPYEGRYIA Rv1730c|M.tuberculosis_H37Rv TNSDGGFHMINDLFASDWALQRFAGLSNLPATPQRLGAVDLAPYEGRYIA MUL_1772|M.ulcerans_Agy99 RLSDEHKR-------------------------HNFLGAPFWVGRG---- MLBr_00119|M.leprae_Br4923 CRRLR----------------------------PDFVVGLMPARWG---- * MAV_3991|M.avium_104 ----FGWDIDTGYSRPRGR------VFPIGSFGNTGFTGTT-LWMDPGSD MMAR_3399|M.marinum_M ----FGWDIDTPYSAPRGV------VFPIGSFGGTGFTGTS-LWIDPGSD MAB_4800|M.abscessus_ATCC_1997 ----LGWDIDTELSKPRGM------LFPIGSFGHSGFTGVT-LWLDPGSD Mvan_5895|M.vanbaalenii_PYR-1 ----FGWDIDTAHSRPRGT------LFPVGSFGHAGFTGVT-LWMDPGSD TH_4016|M.thermoresistible__bu ----FGWDIDTNQSRPRGS------VFPVGSFGHTGFTGVT-LWIDPGSD Mflv_0495|M.gilvum_PYR-GCK ----FGWDIDTAHSGPRGS------VFPVGSFGHTGFTGVS-VWLDPESD MSMEG_6805|M.smegmatis_MC2_155 ----LGWDIDTPHSRPRGT------VFPVGSFGHTGFTGVS-MWMDPGSD Mb1759c|M.bovis_AF2122/97 KQVAQNGDLETTVIDFRARDGQLAGSMSTDDANPDGQNSAN-LGLAFYRP Rv1730c|M.tuberculosis_H37Rv KQVAQNGDLETTVIDFRARDGQLAGSMSTDDANPDGQNSAN-LGLAFYRP MUL_1772|M.ulcerans_Agy99 ----FGLNLSVVTDPVQSTP-----LFGPGGLGTFSWPGAYGTWWQADPG MLBr_00119|M.leprae_Br4923 ----TGFILGTNKFGPFGRN-------APAAFGHLGLVNIA-IWADPQRS . : . . . . . MAV_3991|M.avium_104 TYVILLSNSIHLRGSPP--ISNLRGD--VATAAARALHLYGAAPP---- MMAR_3399|M.marinum_M SYVVLLSNAIHLRGSTP--ISDLRGQ--VATAAALALGL---------- MAB_4800|M.abscessus_ATCC_1997 TYVVVLANVIHQRGGPP--IVRLSGH--IATVAARMLDLYRN------- Mvan_5895|M.vanbaalenii_PYR-1 TYVVVLANVIHQPGGPP--IVNLSGE--VATATAQALGLYR-------- TH_4016|M.thermoresistible__bu TYVVVLANVIHQPGGPP--VAPLSGR--VATLAARALHLYGT------- Mflv_0495|M.gilvum_PYR-GCK TYVVILGNVIHQRGGPP--ITPLSGA--VATEAARALHLYGS------- MSMEG_6805|M.smegmatis_MC2_155 TYVIVLANVIHQRGGPP--IATLSGD--VATEAARALHLYGT------- Mb1759c|M.bovis_AF2122/97 DYGLDLGPDNKPTGSRSNFVRGPDGN--IAWFCSQHGRLFRRQ------ Rv1730c|M.tuberculosis_H37Rv DYGLDLGPDNKPTGSRSNFVRGPDGN--IAWFCSQHGRLFRRQ------ MUL_1772|M.ulcerans_Agy99 ADLILLYLIQHCPDLSVNAAAAVAGNPGLAKLRTAQPRFVRRTYRALGL MLBr_00119|M.leprae_Br4923 MAAGLISS--GKPGQDP--NAGRYGA--LMNTITAEIPVH--------- : . * : : .