For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_3540 (-)

annotation: amidohydrolase
coordinates: 3677190 - 3678467
length: 425

TDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGG
WDVALRDKELDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPE
RRAGVAVVPILADVDAAVAEITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGP
APQEEYGGHLGIYVTEVRWWGARPLWFALWSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAK
KMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSFW
DIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWEAARRTGRHWLTDAEPMPD
LVQS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_3540--100% (425)amidohydrolase
M. avium 104MAV_3541-2e-7439.35% (399) amidohydrolase
M. avium 104MAV_3544-5e-4832.91% (395) amidohydrolase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_2441-1e-1924.37% (398) amidohydrolase 2
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_4821-0.089.34% (422) hypothetical protein MMAR_4821
M. smegmatis MC2 155MSMEG_4837-9e-2125.37% (402) amidohydrolase 2
M. thermoresistible (build 8)TH_2827-2e-1223.98% (367) PUTATIVE amidohydrolase 2
M. ulcerans Agy99MUL_0389-4e-7239.35% (399) hypothetical protein MUL_0389
M. vanbaalenii PYR-1Mvan_2022-1e-1824.49% (396) amidohydrolase 2

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2441|M.gilvum_PYR-GCK          -------MDKNDMILISVDDHIVEPPDMFKNHLSKKYL--------DEAP
Mvan_2022|M.vanbaalenii_PYR-1       -------MNRDDMILISVDDHIVEPPDMFKNHLPSKYL--------DEAP
MSMEG_4837|M.smegmatis_MC2_155      -------MNKDDMILISVDDHIIEPPDMFKNHLPAKYR--------DEAP
MAV_3540|M.avium_104                ------MTDVDPYIIISADTHAELPTERYREYVDPEYR--------EDFE
MMAR_4821|M.marinum_M               MEARKAPNPLEPYVVISADCHAELPTEQYREYVDPDYR--------EDFE
MUL_0389|M.ulcerans_Agy99           ---------MDRYTVISADCHAGADLFDYREYLEAKYQ--------DEFD
TH_2827|M.thermoresistible__bu      -------VTAPALEIWDADNHLYEPTDAYTRHLPKQYRGAIQWIQVDGLT
                                                  : ..* *       : .::  .*         :   

Mflv_2441|M.gilvum_PYR-GCK          RLVHNEDGSDTW---QFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRP
Mvan_2022|M.vanbaalenii_PYR-1       RLVHNPDGSDTW---QFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRP
MSMEG_4837|M.smegmatis_MC2_155      RLVHNPDGSDTW---QFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEIRK
MAV_3540|M.avium_104                TYLAEKTAAA-----QAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKEL
MMAR_4821|M.marinum_M               VYLAEKAAAS-----QVGGFIDEQFAQDWFSEHGEGIAGGWDVGLRDKEL
MUL_0389|M.ulcerans_Agy99           DWA--KTFVN-----PFGDLSEPDAEHNWDSDR------------RNAEL
TH_2827|M.thermoresistible__bu      KLMIKGRLTDTIPNPTYEVVASPGAWADYFRGINPEGKSLRELANPIRCP
                                                               :                      

Mflv_2441|M.gilvum_PYR-GCK          GCW-QVDERVKDMNAGGILGSMCFPSFPGFAGRLFATEDPEFSLALVQAY
Mvan_2022|M.vanbaalenii_PYR-1       GCW-QVDERVKDMNAGGILGSMCFPSFPGFAGRLFATEDAEFSLALVQAY
MSMEG_4837|M.smegmatis_MC2_155      GCY-DPNERVKDMNAGGVLATMNFPSFPGFAARLFATDDEEFSLALVQAY
MAV_3540|M.avium_104                DGD-GVVGEVIFPDADAVTGVAGAPFGAGLGQ--SGDLDPGRAMAGARAH
MMAR_4821|M.marinum_M               DSD-GVVGEVIFPDADAVSGVAGAPFGAGLAQ--SGSLDPGRAMAGARAH
MUL_0389|M.ulcerans_Agy99           DSD-GVAGEVIFPNTVPPFFPQGSLAAPAPST--ARDLELR--WAGLRAH
TH_2827|M.thermoresistible__bu      EEFRHAEQRLRLLDAQGIQACVMFPTTGGMLEERMLD-DIELTHAVVHAY
                                            .:   ::             .         :     *  :*:

Mflv_2441|M.gilvum_PYR-GCK          NDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHS-LTFSE
Mvan_2022|M.vanbaalenii_PYR-1       NDWHVEEWCGAYPARFIPMTLPVIWDPVACAAEIRRNAARGVHS-LTFSE
MSMEG_4837|M.smegmatis_MC2_155      NDWHIDEWCASNPGRFIPMAIPAIWNPGLAAAEVRRVAEKGVHS-LTFTE
MAV_3540|M.avium_104                NRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGILIP-
MMAR_4821|M.marinum_M               NRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGIMIP-
MUL_0389|M.ulcerans_Agy99           NRWLADFCSLSPERRAGVGQI-LLGDVDEAVAEVAQIAKLGLPGGVLLPG
TH_2827|M.thermoresistible__bu      NEWLLEEWTFDYAGRIFATPVITLPDVDKAVAELNWCVENGARAVLVNPR
                                    * *  :        *     :  : :   .. *:   .  *  . :  . 

Mflv_2441|M.gilvum_PYR-GCK          -NPSAMGYPSFHDFDHWKPMWDALVDTDTVLNVHIGSSGRLAITA-----
Mvan_2022|M.vanbaalenii_PYR-1       -NPSAMGYPSFHDFEHWKPMWDALVDTDTVLNVHIGSSGRLAITA-----
MSMEG_4837|M.smegmatis_MC2_155      -NPSTLGYPSFHDLEYWRPLWQALVDTETVMNVHIGSSGKLAITA-----
MAV_3540|M.avium_104                --ARWVGYPPYHD-RRYDKVWAACQDLQMPVHTHSG---PAPQEE-----
MMAR_4821|M.marinum_M               --ALWASYPPYHD-RRYDKVWAACQDLQMPVHTHVG---AAPQQE-----
MUL_0389|M.ulcerans_Agy99           -VAPGTGIPALYA-EHWEPLWAACAQAGLVINHHGGNAGPSPIDG-----
TH_2827|M.thermoresistible__bu      PVATITGHTTSMGQPYFDPFWHRVEQLGIPVLMHACDSGYDRYSRDWEGK
                                      .   . ..      :  .*    :    :  *                

Mflv_2441|M.gilvum_PYR-GCK          -------PDAPMDVMITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGG
Mvan_2022|M.vanbaalenii_PYR-1       -------PDAPMDVMITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGG
MSMEG_4837|M.smegmatis_MC2_155      -------PDAPMDVMITLQPMNIVQAAADLLWSAPIKEFPTLKIALSEGG
MAV_3540|M.avium_104                -------YGGHLGIYVTEVRWWGARPLWFALWSGVFERFPGLRWGVTECG
MMAR_4821|M.marinum_M               -------YGEHLGIYVTEVRWWGVRPLWFALWSGVFERFPGLRWGATECG
MUL_0389|M.ulcerans_Agy99           -------WGSSLAVLVYESHWWAHRALLHLIFSGVLDRYPDLTVVLTEQG
TH_2827|M.thermoresistible__bu      GGEYTPFKPDAFRTIVYEDARSILDTCAALVAHGVFTRHPGVRVGVVENG
                                               :   :         .    :    : ..* :     * *

Mflv_2441|M.gilvum_PYR-GCK          TGWIP---YFLERVDRTYEMHSTWTG-------QDFKGKLPSEVFREHFL
Mvan_2022|M.vanbaalenii_PYR-1       TGWIP---YFLERVDRTYEMHSTWTG-------QDFKGKLPSEVFREHFL
MSMEG_4837|M.smegmatis_MC2_155      TGWIP---YFLDRVDRTFEMHSTWTH-------QNFGGKLPSEVFREHFM
MAV_3540|M.avium_104                AFWAN---DLLWLMDTRYLREHSAKK-MSHLMEGDLTMPPSAYFDRNCFI
MMAR_4821|M.marinum_M               AFWAN---DLLWLMDTRYLREHSAKK-MSHLLEGDLTMPPSAYFDRNCFI
MUL_0389|M.ulcerans_Agy99           TGWIPATLDSLDVAAARYRRPNSAIARFAGPTAGSLPLQPSQYWARQCYV
TH_2827|M.thermoresistible__bu      GAWVP---RLIDLFERVYKKMPNEFG------------AHPVEQFREHVW
                                      *       :      :    .                 .    *:   

Mflv_2441|M.gilvum_PYR-GCK          TCFIADPVGVATRHQIGVDNICWEADYPHSDSMWPGAPEQLDEVLKANNV
Mvan_2022|M.vanbaalenii_PYR-1       TCFIADPVGVATRHQIGVDNICWEADYPHSDSMWPGAPEQLDEVLKVNNV
MSMEG_4837|M.smegmatis_MC2_155      TCFISDPVGVKNRHMIGIDNICWEMDYPHSDSMWPGAPEELSAVFDTYDV
MAV_3540|M.avium_104                GATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSF--WDI
MMAR_4821|M.marinum_M               GATTTERRELARRYEIGVSNMLWGNDFPHPEGTWPHTREWLRRSF--WDI
MUL_0389|M.ulcerans_Agy99           GASFLRPVECAQRHRIGVDRIMWASDYPHMEGTAPYSREALRHTF--SDV
TH_2827|M.thermoresistible__bu      VNPFHEEDLSGLIDLIGADRVLFGSDFPHPEG----LAEPAKLTPEIAEL
                                                   ** ..: :  *:** :.      :         ::

Mflv_2441|M.gilvum_PYR-GCK          PDDEINKMTYENAMRWYHWDPFTHIAKEQATVGALRKAAEGHDVSIQALS
Mvan_2022|M.vanbaalenii_PYR-1       PDDEIDKMTYQNAMRWYHWDPFTHIPKEQATVGALRKAAEGHDVSIQALS
MSMEG_4837|M.smegmatis_MC2_155      PDDEINKITHENAMRLYHFDPFAHVPKEQATVGALRKAAEGHDVSIRALS
MAV_3540|M.avium_104                PVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWE
MMAR_4821|M.marinum_M               PIDETRQILGLAAAEVYNFDLDALAPLAGRIGPTPADLGQDDAVSVPKWE
MUL_0389|M.ulcerans_Agy99           DPDEVAAMVGGNAAAVYGFDLQALAPLAARIGPTVTEVAEP-LAAIPADA
TH_2827|M.thermoresistible__bu      PEPTIEAVMGGNLRELLTAVPHGR--------------------------
                                           :                                          

Mflv_2441|M.gilvum_PYR-GCK          NK---EKTG--TTFSDFAASAKSISGNKD
Mvan_2022|M.vanbaalenii_PYR-1       HHKEGERGGGAGHFDALNAAARGNSGAD-
MSMEG_4837|M.smegmatis_MC2_155      KK---DKTG--ASFADFQANAKAVSGARD
MAV_3540|M.avium_104                AARRTGRHW----LTDAEPMPDLVQS---
MMAR_4821|M.marinum_M               AARQAGRHW----LTGAEPLADLVQN---
MUL_0389|M.ulcerans_Agy99           SS------------TAFEPDPIRAW----
TH_2827|M.thermoresistible__bu      -----------------------------