For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGDPVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKDTQPTAALRAKAAWLWSDRRAVLAGRSASALHRS RWLDPRAPAELIHDNRRPPCGIKTWLDRFEDDEITVVDGIRVTTPARTAVDLACRYPLDTAVTLIDALGN ATRLKMADVELLVDRYRGRRGIKNARHVLDLVDGGAESPRETWLRLEVIRGGFPRPQTQIPVHDEYGVLV GVFDMGWEDAMVGLDYEGDQHRTDRRRFNRDIHKSEDVRRLGWTHIRVTAQDGEADILKRIEAAGVPRGP RV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5917 | - | - | 100% (282) | hypothetical protein MSMEG_5917 |
| M. smegmatis MC2 155 | MSMEG_5643 | - | 4e-85 | 55.04% (278) | hypothetical protein MSMEG_5643 |
| M. smegmatis MC2 155 | MSMEG_0785 | - | 4e-75 | 49.64% (274) | hypothetical protein MSMEG_0785 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3546 | - | 6e-96 | 60.66% (272) | hypothetical protein Mb3546 |
| M. gilvum PYR-GCK | Mflv_4708 | - | 3e-86 | 57.30% (274) | hypothetical protein Mflv_4708 |
| M. tuberculosis H37Rv | Rv3517 | - | 6e-96 | 60.66% (272) | hypothetical protein Rv3517 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1570 | - | 1e-76 | 49.64% (274) | hypothetical protein MAB_1570 |
| M. marinum M | MMAR_5026 | - | 9e-77 | 49.82% (281) | hypothetical protein MMAR_5026 |
| M. avium 104 | MAV_0642 | - | 5e-96 | 58.99% (278) | hypothetical protein MAV_0642 |
| M. thermoresistible (build 8) | TH_1775 | - | 2e-82 | 52.21% (272) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_4737 | - | 1e-65 | 45.88% (279) | hypothetical protein MUL_4737 |
| M. vanbaalenii PYR-1 | Mvan_1730 | - | 3e-60 | 42.70% (274) | hypothetical protein Mvan_1730 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5917|M.smegmatis_MC2_155 ----------MGDPVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKDTQP
Mflv_4708|M.gilvum_PYR-GCK ----------MGEPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVATTL
Mb3546|M.bovis_AF2122/97 ----------MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADL
Rv3517|M.tuberculosis_H37Rv ----------MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADL
MAV_0642|M.avium_104 ----------MAEPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTAL
TH_1775|M.thermoresistible__bu ------MAAPFSEPFLGSEALTSGALTRHQLRTRYRAIHRDVYIANDAEL
MAB_1570|M.abscessus_ATCC_1997 ----------MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQL
MMAR_5026|M.marinum_M ----------MAVPFLGSEAVASGEVRKSALRTRYHRLFPDVYIRCDAEL
MUL_4737|M.ulcerans_Agy99 MDAREARAARSEDVFVGSGAVRRGRLSPYRLRTEFRAIYPDVYLPAHAAP
Mvan_1730|M.vanbaalenii_PYR-1 ----------MGGVILGSEAIADGLVTSGRLRFGYSRLYPNVYVPRGQPQ
.:*: *: * ** . :. .:*:
MSMEG_5917|M.smegmatis_MC2_155 TAALRAKAAWLWSDRRAVLAGRSASALHRSRWLDPRAPAELIHDNRRPPC
Mflv_4708|M.gilvum_PYR-GCK TAVAKAKAASLWTGREGIIAGQSAAAIHGARWVDARRPAEVLWHNRRAPR
Mb3546|M.bovis_AF2122/97 TAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPPA
Rv3517|M.tuberculosis_H37Rv TAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPPA
MAV_0642|M.avium_104 SAGLRARSAWLWSRRRGVVAGRSAAALYGTKWIDDRAPAQLLYPYRRPPD
TH_1775|M.thermoresistible__bu DAVLRAKACWLRSRGHGVLAGFSASALHGAKYVDPRRPATVIDTNRRRTP
MAB_1570|M.abscessus_ATCC_1997 TPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAEIVHDNRHRQP
MMAR_5026|M.marinum_M SPQARARAGWLWSRRRGIVAGLAASALHGARWVDPDAPLDILHVNRNPRP
MUL_4737|M.ulcerans_Agy99 SFRTRCKAAWLWTGRRGVLGGLAAAGLHGSDWIGDDEPVELIWRNPHPPA
Mvan_1730|M.vanbaalenii_PYR-1 SLIDNTVGAWLWSGRRAIVTGRAAAALHGARWVSEKARVELNYNCRRPPK
. . * : ..:: * :*:.:: : ::. : .
MSMEG_5917|M.smegmatis_MC2_155 GIKTWLDRFEDDEITVVDGIRVTTPARTAVDLACRYPLDTAVTLIDALGN
Mflv_4708|M.gilvum_PYR-GCK GVLVWSDRVADDEVTTVRGVRVTTPERTALDIACRYPQRRAVAAIDALAR
Mb3546|M.bovis_AF2122/97 GIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALAR
Rv3517|M.tuberculosis_H37Rv GIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALAR
MAV_0642|M.avium_104 GIQTWSDRLVGDEIQTIGGMPVTTPARTALDIACRSPVDKAVAAIDALAR
TH_1775|M.thermoresistible__bu GILTWGHTLDEDEICEIDGMRLTTPARTAVDLACRYPVGTSVAAIDALAR
MAB_1570|M.abscessus_ATCC_1997 GITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCR
MMAR_5026|M.marinum_M GIRARGDRIATDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDSLMR
MUL_4737|M.ulcerans_Agy99 GVITRNQRIEPDEVTRVAGLAVTTLARTAFDLGRQLPGGESVARLDALMR
Mvan_1730|M.vanbaalenii_PYR-1 GIVCRDERIGCDEVIQVGELAVAAAHRTAFDLGRHLPLNSAVVHLDALAN
*: . **: : : :: ***.*:. * :*. :*:* .
MSMEG_5917|M.smegmatis_MC2_155 ATRLKMADVELLVDRYRGRRGIKNARHVLDLVDGGAESPRETWLRLEVIR
Mflv_4708|M.gilvum_PYR-GCK AAHMKLADVELLVDRHTGRRGIRAARAALNLVDPGAESPQETYLRLTVIG
Mb3546|M.bovis_AF2122/97 ATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIR
Rv3517|M.tuberculosis_H37Rv ATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIR
MAV_0642|M.avium_104 ATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRETWLRLLLLR
TH_1775|M.thermoresistible__bu AARLKVADIEAAAQRHPGRHGLRRAREAIALVDPGAESPRETALRLLIVR
MAB_1570|M.abscessus_ATCC_1997 ATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPKETWLRLLLRD
MMAR_5026|M.marinum_M AADVGRAQIETLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLLLLD
MUL_4737|M.ulcerans_Agy99 ATAFSGEDVLLLAKRYSGARGLRRLRATLPLVDAGAASPRESWLRMVLID
Mvan_1730|M.vanbaalenii_PYR-1 ATGLTRERVLPLLDEYRGARGMKKLRTALDLMDGGAQSPRETWLRLLLMK
*: . .: : : * .. * ** **:*: **: :
MSMEG_5917|M.smegmatis_MC2_155 GGFPRPQTQIPVHDEYGVLVGVFDMGWEDAMVGLDYEGDQHRTDRRRFNR
Mflv_4708|M.gilvum_PYR-GCK NHFPPPQTQIPVWD-CGALVAELDMGWEHMMIGLDYEGDHHRTTREAFNK
Mb3546|M.bovis_AF2122/97 AGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK
Rv3517|M.tuberculosis_H37Rv AGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK
MAV_0642|M.avium_104 AGFPRPRTQLPVR-QYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTK
TH_1775|M.thermoresistible__bu AGYPPPETQLPIHNEFGVLIGVVDMGWRDRRIAVEYEGRHHFTSRRAINR
MAB_1570|M.abscessus_ATCC_1997 AGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLK
MMAR_5026|M.marinum_M DGLPRPQTQIRVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQYSW
MUL_4737|M.ulcerans_Agy99 AGLPVPVTQIPVH-QNWRLVAVLDMGWQKYQVAAEYDGDQHRFDRRQYAR
Mvan_1730|M.vanbaalenii_PYR-1 D-FPRPTTQIPLFNSRGAPFAYLDMGWEDLKIAVEYDGEHHQKNRDQYIW
* **: : .. .**** :. :*:* :* *
MSMEG_5917|M.smegmatis_MC2_155 DIHKSEDVRRLGWTHIRVTAQDGEADILKRIEAAGVPR----------GP
Mflv_4708|M.gilvum_PYR-GCK GIRRHDAVTELGWTDIRVTCNDTEGAIIARLTTAWRQRLCALGENPDAGP
Mb3546|M.bovis_AF2122/97 DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT-----------
Rv3517|M.tuberculosis_H37Rv DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT-----------
MAV_0642|M.avium_104 DIRRAEVLAELGWTVVRVTAEDTPAGIIARVPTAWTRRACTGSEKPARNS
TH_1775|M.thermoresistible__bu DIRRHDDMLEMGWTVLRVTAADTDGGFLRRLETAWSRPAEHSPAQHSPAQ
MAB_1570|M.abscessus_ATCC_1997 DIRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV-----------
MMAR_5026|M.marinum_M DIRRKEILERLGWTVIRVLAGDRPTDILRRVRAALVRRASR---------
MUL_4737|M.ulcerans_Agy99 EQWRLRKLDELGWIVIRVIAGDAPEDVVRRVRQALARRGHRET-------
Mvan_1730|M.vanbaalenii_PYR-1 DEQRLRLIRARDWLHIKVIKEDEPDDVTARVKRAWALRERAFAVAERVS-
: : .* ::* * . *: *
MSMEG_5917|M.smegmatis_MC2_155 ---RV-------
Mflv_4708|M.gilvum_PYR-GCK PWTHVRRQRPGQ
Mb3546|M.bovis_AF2122/97 ------------
Rv3517|M.tuberculosis_H37Rv ------------
MAV_0642|M.avium_104 R-----------
TH_1775|M.thermoresistible__bu RSPAQRS-----
MAB_1570|M.abscessus_ATCC_1997 ------------
MMAR_5026|M.marinum_M ------------
MUL_4737|M.ulcerans_Agy99 ------------
Mvan_1730|M.vanbaalenii_PYR-1 ------------