For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAVIRKFCHQLPGWIDQATRERAEADLANQGTRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLD NQHADGMSELRGWLTPELRATLEAVLAKLAAPGMCNPLDENPCVDGTPTEQAIEGDTRSAAQRNHDGLLA GLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRGLTGGGTLLPMSDVIRLSRHAHHYLAIFDHGKAL ALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYAEVHHCTDYATCHTTNINDLTFACGPHHRLLQPGA WTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEEDGDEDEDEP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. avium 104 | MAV_2977 | - | - | 100% (329) | hypothetical protein MAV_2977 | 
| M. avium 104 | MAV_2999 | - | 0.0 | 94.21% (328) | hypothetical protein MAV_2999 | 
| M. avium 104 | MAV_1426 | - | 0.0 | 94.21% (328) | hypothetical protein MAV_1426 | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | Mb1159c | - | 1e-137 | 71.21% (323) | hypothetical protein Mb1159c | 
| M. gilvum PYR-GCK | Mflv_1835 | - | 6e-94 | 52.71% (332) | hypothetical protein Mflv_1835 | 
| M. tuberculosis H37Rv | Rv1128c | - | 1e-136 | 70.90% (323) | hypothetical protein Rv1128c | 
| M. leprae Br4923 | - | - | - | - | - | 
| M. abscessus ATCC 19977 | MAB_0394c | - | 1e-103 | 57.37% (319) | hypothetical protein MAB_0394c | 
| M. marinum M | MMAR_3121 | - | 1e-127 | 67.08% (325) | hypothetical protein MMAR_3121 | 
| M. smegmatis MC2 155 | MSMEG_6573 | - | 3e-74 | 44.21% (337) | hypothetical protein MSMEG_6573 | 
| M. thermoresistible (build 8) | TH_3287 | - | 1e-60 | 39.23% (362) | PUTATIVE conserved hypothetical protein | 
| M. ulcerans Agy99 | MUL_2371 | - | 1e-127 | 67.08% (325) | hypothetical protein MUL_2371 | 
| M. vanbaalenii PYR-1 | Mvan_4827 | - | 2e-89 | 50.60% (332) | hypothetical protein Mvan_4827 | 
CLUSTAL 2.0.9 multiple sequence alignment
Mb1159c|M.bovis_AF2122/97           -------MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCE
Rv1128c|M.tuberculosis_H37Rv        -------MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCE
MAV_2977|M.avium_104                --------------------------------------------------
MMAR_3121|M.marinum_M               ---MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLE
MUL_2371|M.ulcerans_Agy99           ---MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLE
MAB_0394c|M.abscessus_ATCC_199      -----------MSPIDDLLTTATAVVESS----FDELNNPELLSALRQLE
TH_3287|M.thermoresistible__bu      MGQQFVTAGAARARVGELLAAVDAAYAEMRALCLDEVGTGFRLELAERLE
Mflv_1835|M.gilvum_PYR-GCK          ----MYVRVMSGGDLQTRIAVLRAAFDEVAACEIELLTRPDLVAALDELE
Mvan_4827|M.vanbaalenii_PYR-1       ----MYVRAMSGSDVQAAVTALRTAFDDMAACDVDLLTRPDLVAALDELE
MSMEG_6573|M.smegmatis_MC2_155      ---------MDDG-VQDAVAALDAALNTLLTLPHSALTDAELLTICAGLQ
                                                                                      
Mb1159c|M.bovis_AF2122/97           TARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADR-LRITRSEAKRRV
Rv1128c|M.tuberculosis_H37Rv        TARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADR-LRITRSEAKRRV
MAV_2977|M.avium_104                --------------------------------------------------
MMAR_3121|M.marinum_M               VVARRLPVAQYALLNQLDEQAGEAELGGRLAAVVASR-LRITRSEAGRRV
MUL_2371|M.ulcerans_Agy99           VVARRLPAAQYALVNQLDEQPGEAELGGRLAAVVASR-LRITRSEAGRRV
MAB_0394c|M.abscessus_ATCC_199      IAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTATARRRL
TH_3287|M.thermoresistible__bu      TQCRINRGLMYRVFAQLADPPDEPAMVPAVRDRLWAR-LRITPGEVKRRL
Mflv_1835|M.gilvum_PYR-GCK          ELSCQLPAVGHRLLARLQAEGTPQQMGAKNWSEVLRVRWRISGSEAHRRL
Mvan_4827|M.vanbaalenii_PYR-1       TVGCRLPALSYRLLARLQAETTPPQMGAKSWKEVLAVRWRISTSEAHRRL
MSMEG_6573|M.smegmatis_MC2_155      DARNRIPAVEHRAIAALSQQTTPAAIGAKSWPLVLATRLGISSKEARRRC
                                                                                      
Mb1159c|M.bovis_AF2122/97           AEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPS
Rv1128c|M.tuberculosis_H37Rv        AEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPS
MAV_2977|M.avium_104                -------------------------------------MAVIRKFCHQLPG
MMAR_3121|M.marinum_M               AEAADVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRRLPA
MUL_2371|M.ulcerans_Agy99           AEAAEVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRQLPA
MAB_0394c|M.abscessus_ATCC_199      ADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPD
TH_3287|M.thermoresistible__bu      RVAALLRPRRRLSGPPLPPVLARVAGAVESGLLGEEHLRVITTVMAALPS
Mflv_1835|M.gilvum_PYR-GCK          TEAALLAPRPSLTGPALPPQLAATAIAQARGLINAEHVAVIRKAVKKLPG
Mvan_4827|M.vanbaalenii_PYR-1       TEAAVLAPRQAMTGEALPPVLPATAAAQAHGLINAEHVEVIRKAMAKLPG
MSMEG_6573|M.smegmatis_MC2_155      TDAAELGPRVSMTGEALAPKREHIAAAQADGTLTPDHVAELFKFFTKCPD
                                                                         :  :       * 
Mb1159c|M.bovis_AF2122/97           WVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG-DYTDEDRA
Rv1128c|M.tuberculosis_H37Rv        WVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG-DYTDEDRA
MAV_2977|M.avium_104                WIDQATRERAEADLANQGTRYRPEQLAALAGTLADCLNPDG-LYRDEDRA
MMAR_3121|M.marinum_M               GVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDG-RHSDEDRA
MUL_2371|M.ulcerans_Agy99           GVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDG-RHSDEDRA
MAB_0394c|M.abscessus_ATCC_199      AVDADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPDG-RFSDIDRA
TH_3287|M.thermoresistible__bu      AVSVTDREAVEASLIAEAARSDAGIVRQVGRRIEEIFNPDG-HYDDQDRA
Mflv_1835|M.gilvum_PYR-GCK          WVDVATREQFEVNLVRTAVGHGPKELNDAADRMLFLLDQDGPEPDDAERG
Mvan_4827|M.vanbaalenii_PYR-1       FVDTATRERIEVDLVRTAVGNGPKELKDSADRTLFLLDQDGPEPDERERA
MSMEG_6573|M.smegmatis_MC2_155      WVTYAEQCRLEEKLVTGAIGADPETVRQAVDHAVFLLDQDGPAPTDNPPT
                                     :        *  *   .    .  :          .: **    :    
Mb1159c|M.bovis_AF2122/97           RRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQ---
Rv1128c|M.tuberculosis_H37Rv        RRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQ---
MAV_2977|M.avium_104                RRRSLTLDNQHADGMSELRGWLTPELRATLEAVLAKLAAPGMCNPLD---
MMAR_3121|M.marinum_M               RRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPED---
MUL_2371|M.ulcerans_Agy99           RRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPED---
MAB_0394c|M.abscessus_ATCC_199      RRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRD---
TH_3287|M.thermoresistible__bu      RRRGIHLGDQQRDGMSAISGWIDPQLRAYLEAVTAAVR-PGRHLPHTTTD
Mflv_1835|M.gilvum_PYR-GCK          RKRGVSIGRQGAEAMSALTGQLTPEARAVWEAIFAKYAAPGMCNPDD---
Mvan_4827|M.vanbaalenii_PYR-1       RKRAVTKHKQREDGMVDVSATLTPEAWAVWEAIFAKFAAPGMCNPDD---
MSMEG_6573|M.smegmatis_MC2_155      KPFGITFGPQQPDGSYHLRGKVSAEFKATFDPIDEKLAAPGMCNPTD---
                                    :  .:    *  :.   : . : .:  *  :.:      **   *     
Mb1159c|M.bovis_AF2122/97           --------KAPCVNGAPSKEQARRDT---------------RSCPQRNHD
Rv1128c|M.tuberculosis_H37Rv        --------KAPCVNGAPSKEQARRDT---------------RSCPQRNHD
MAV_2977|M.avium_104                --------ENPCVDGTPTEQAIEGDT---------------RSAAQRNHD
MMAR_3121|M.marinum_M               --------EAAVVDGPVSPDAADRDS---------------RSVGQRQHD
MUL_2371|M.ulcerans_Agy99           --------EAAVVDGPVSRDAADRDS---------------RSVSQRQHD
MAB_0394c|M.abscessus_ATCC_199      --------ESPMTEGEPDSAAAERDT---------------RTSAQRNHD
TH_3287|M.thermoresistible__bu      TTGTTGTTETTGTAGTAGTAATAADTAADGVGDIDTGGVDLRSAAQRRHD
Mflv_1835|M.gilvum_PYR-GCK          --------EQPCTSGTPSQAQIDGDH---------------RSLAQRQHD
Mvan_4827|M.vanbaalenii_PYR-1       --------PEPCTSGTPSQAQIDNDH---------------RSLAQRQHD
MSMEG_6573|M.smegmatis_MC2_155      --------QTPCISGTPSQQQIDSDQ---------------RGAPERRHD
                                              .   *         *                *   :*.**
Mb1159c|M.bovis_AF2122/97           ALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA-----------G
Rv1128c|M.tuberculosis_H37Rv        ALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA-----------G
MAV_2977|M.avium_104                GLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAA-----------G
MMAR_3121|M.marinum_M               GFNAALRAVLASGELGQHNGLPASIIVSTTLKELEAAA-----------G
MUL_2371|M.ulcerans_Agy99           GFNAALRAVLASGELGQHNGLPASIIVSTTLKELEAAA-----------G
MAB_0394c|M.abscessus_ATCC_199      GLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAA-----------G
TH_3287|M.thermoresistible__bu      GLTLGLKIAVASGRLGSHRGHPVTVIVRTTLGELNQAAHAVADPRVSMPG
Mflv_1835|M.gilvum_PYR-GCK          ALLAVGRIALMSGELGQLNGLPVSVIIRTTLQDLESRA-----------G
Mvan_4827|M.vanbaalenii_PYR-1       ALLAGGRIALMSGQLGQLNGLPVSVIIRTTLQDLESRA-----------G
MSMEG_6573|M.smegmatis_MC2_155      AMLTAMRLLLAHKDLGQINGLPATLLVTTTLQELEKAA-----------G
                                    .:    :  :    **  .* *.:::: *** :*:  *           *
Mb1159c|M.bovis_AF2122/97           AGLTGGGTILPISDVIRLARHANHYLAIFDRG--KALALYHTKRLASPAQ
Rv1128c|M.tuberculosis_H37Rv        AGLTGGGTILPISDVIRLARHANHYLAIFDRG--KALALYHTKRLASPAQ
MAV_2977|M.avium_104                RGLTGGGTLLPMSDVIRLSRHAHHYLAIFDHG--KALALYHTKRLASPAQ
MMAR_3121|M.marinum_M               RGLTGGGTLLPMSDVIRLARHAHHYLAVFDRG--EAIGLYHAKRLATPGQ
MUL_2371|M.ulcerans_Agy99           RGLTGGGTLLPMSDVIRLARHAHHYLAVFDRG--EAIGLYHAKRLATPGQ
MAB_0394c|M.abscessus_ATCC_199      RAISGSGNLVPIPDLIRMATHAFHYLTIFGDD-GRPLHLGRSKRIATPDQ
TH_3287|M.thermoresistible__bu      PARTGGTGVLPMRELIRMAADAIHYLAVFDDHTERPLYLGRQKRIATADQ
Mflv_1835|M.gilvum_PYR-GCK          IGVSGGGTKLPIRDVIRMAGHANHYLAVFDRATGSALDLFRTRRVASPAQ
Mvan_4827|M.vanbaalenii_PYR-1       VGVTGGGTVMPIAEVIRMAGHAHHYLAVFDRATGSALDLFRTRRIASPAQ
MSMEG_6573|M.smegmatis_MC2_155      VAITAGGTKLSIPDLIRLASQALHYLAVYDEHTGIPLYLGRARRTASAGQ
                                     . :..   :.: ::**:: .* ***:::.     .: * : :* *:. *
Mb1159c|M.bovis_AF2122/97           RIMLYAKDSGCSAPGCDVPGYYCEVHHVT-PYAQCRNTDVNDLTLGCGGH
Rv1128c|M.tuberculosis_H37Rv        RIMLYAKDSGCSAPGCDVPGYYCEVHHVT-PYAQCRNTDVNDLTLGCGGH
MAV_2977|M.avium_104                RIVLYAKDRGCTAPGCTIPGYYAEVHHCT-DYATCHTTNINDLTFACGPH
MMAR_3121|M.marinum_M               RIVLYAKDRGCTRPGCDVAGYQCEVHHVA-AWAISGRTDINQLTLACGPD
MUL_2371|M.ulcerans_Agy99           RIVLYAKDRGCTRPGCDVAGYQCEVHHVA-AWAISGRTDINQLTLACGPD
MAB_0394c|M.abscessus_ATCC_199      RIVLHAKDRGCSAPGCTVPGYLCQVHHVD-DWRDDGPTDIDNLTFACGPH
TH_3287|M.thermoresistible__bu      RLICYARDGGCTAPGCGEPGYHAETHHQP-AWEDGGLTDADHLFFACGPH
Mflv_1835|M.gilvum_PYR-GCK          RVMLIARDGGCTKPCCTVGAYGCQVHHAEADYAHGGNTNIDELGLACGPD
Mvan_4827|M.vanbaalenii_PYR-1       RIMLIARDGGCTKPGCPVGAYGCQGHHVEADFAQGGNTNVDELGLACGPD
MSMEG_6573|M.smegmatis_MC2_155      RLAIWARDRGCTRPGCTANGYRCQAHHATTDYAKGGLTDADALALACGCD
                                    *:   *:* **: * *   .* .: **    :     *: : * :.** .
Mb1159c|M.bovis_AF2122/97           HP--LAERG-WTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLAD--
Rv1128c|M.tuberculosis_H37Rv        HP--LAERG-WTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLAD--
MAV_2977|M.avium_104                HR--LLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEE
MMAR_3121|M.marinum_M               HK--LLEQG-WRTRKNAHGDTEWLPPPHLDHGQPRTNTYHHPEKLLRDSA
MUL_2371|M.ulcerans_Agy99           HK--LLEQG-WRTRKNAHGDTEWLPPPHLDHGQPRTNSYHHPEKLLRDSA
MAB_0394c|M.abscessus_ATCC_199      HR--LLQQGWTTRKRRSDGITEWIPPPHLDTGQSRTNDHHHPERFIRRF-
TH_3287|M.thermoresistible__bu      HS--GLTEGRWQATITPTGRLAWTNDHHPPT----VNHAHHPEELLRAHT
Mflv_1835|M.gilvum_PYR-GCK          NRSVTD--GGWTTRMNDRCEVEWIPPPGLDTGQARVNTYHRPERLLRP--
Mvan_4827|M.vanbaalenii_PYR-1       NRDVNDH-GGWTTQMNERCEVEWTPPPPLDTGQARINNYHRPERLLRPP-
MSMEG_6573|M.smegmatis_MC2_155      NRLVGEAPNKWTTRINNHGQCEWIPPDLLDRGQHRTNTYHHPETLLADIN
                                    :       .             *             *  *:** ::    
Mb1159c|M.bovis_AF2122/97           ----DEGDP-----------------------------------------
Rv1128c|M.tuberculosis_H37Rv        ----DEGDP-----------------------------------------
MAV_2977|M.avium_104                DGDEDEDEP-----------------------------------------
MMAR_3121|M.marinum_M               D-DDDEGHGAA---------------------------------------
MUL_2371|M.ulcerans_Agy99           D-DDDEGHGAA---------------------------------------
MAB_0394c|M.abscessus_ATCC_199      --------------------------------------------------
TH_3287|M.thermoresistible__bu      DPPEDPG-------------------------------------------
Mflv_1835|M.gilvum_PYR-GCK          EDPEPLGDN----------------------------------DSQ--AS
Mvan_4827|M.vanbaalenii_PYR-1       EEPEPHSDNDI-------------------AATAKPAEGNEIGDAQPGAP
MSMEG_6573|M.smegmatis_MC2_155      RDQKTDGDNREQHHTDTGADTGTVHVNGHGEKPAIPPELLDQGQQRTAPY
                                                                                      
Mb1159c|M.bovis_AF2122/97           --------------------------------------------------
Rv1128c|M.tuberculosis_H37Rv        --------------------------------------------------
MAV_2977|M.avium_104                --------------------------------------------------
MMAR_3121|M.marinum_M               --------------------------------------------------
MUL_2371|M.ulcerans_Agy99           --------------------------------------------------
MAB_0394c|M.abscessus_ATCC_199      --------------------------------------------------
TH_3287|M.thermoresistible__bu      --------------------------------------------------
Mflv_1835|M.gilvum_PYR-GCK          RPADDP----------------------GEPGGP----APPEGEAA----
Mvan_4827|M.vanbaalenii_PYR-1       HPADNP----------------------GEPGGP----APPDNQAA----
MSMEG_6573|M.smegmatis_MC2_155      HQAEVPPVNTRDTRSSTTTRDANRHNGNGDRNSAENRNGPSKNAAGDDDE
                                                                                      
Mb1159c|M.bovis_AF2122/97           --
Rv1128c|M.tuberculosis_H37Rv        --
MAV_2977|M.avium_104                --
MMAR_3121|M.marinum_M               --
MUL_2371|M.ulcerans_Agy99           --
MAB_0394c|M.abscessus_ATCC_199      --
TH_3287|M.thermoresistible__bu      --
Mflv_1835|M.gilvum_PYR-GCK          --
Mvan_4827|M.vanbaalenii_PYR-1       --
MSMEG_6573|M.smegmatis_MC2_155      PR