For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAERLAGKVALVSGGARGMGASHVRSLVAEGAKVVFGDILDDEGKAVAAEVGEATRYLHLDVTKPEDWDA AVATALAEFGRIDVLVNNAGIINIGTLEDYALSEWQRILDINLTGVFLGIRAVVKPMKKAGRGSIINISS IEGMAGTIACHGYTATKFAVRGLTKSAALELGPSGIRVNSIHPGLIKTPMTEWVPEDIFQSALGRAAEPK EVSNLVVYLASDESSYSTGSEFVVDGGTTAGLGHKDFSNVETDAQPDWVT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2509 | - | - | 100% (260) | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase |
M. avium 104 | MAV_5136 | - | 2e-89 | 63.52% (244) | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase |
M. avium 104 | MAV_1572 | - | 5e-45 | 38.33% (240) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2025 | fabG3 | 1e-124 | 83.66% (257) | 20-beta-hydroxysteroid dehydrogenase |
M. gilvum PYR-GCK | Mflv_4505 | - | 1e-118 | 78.60% (257) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv2002 | fabG3 | 1e-124 | 83.66% (257) | 20-beta-hydroxysteroid dehydrogenase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 3e-26 | 32.64% (239) | 3-oxoacyl- |
M. abscessus ATCC 19977 | MAB_4680c | - | 3e-60 | 49.17% (242) | putative short-chain dehydrogenase/reductase |
M. marinum M | MMAR_2981 | fabG3_1 | 1e-124 | 83.85% (260) | 20-beta-hydroxysteroid dehydrogenase FabG3_1 |
M. smegmatis MC2 155 | MSMEG_3515 | - | 2e-87 | 64.05% (242) | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase |
M. thermoresistible (build 8) | TH_3693 | - | 3e-47 | 41.25% (240) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_1037 | fabG3 | 3e-91 | 65.16% (244) | 20-beta-hydroxysteroid dehydrogenase FabG3 |
M. vanbaalenii PYR-1 | Mvan_3000 | - | 3e-82 | 58.94% (246) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mb2025|M.bovis_AF2122/97 ----------MSGR----LIGKVALVSGGARGMGASHVRAMVAEGAKVVF Rv2002|M.tuberculosis_H37Rv ----------MSGR----LIGKVALVSGGARGMGASHVRAMVAEGAKVVF MMAR_2981|M.marinum_M ----------MAGR----LTGKVALVSGGARGMGASHVRALVAEGAHVVL MAV_2509|M.avium_104 ----------MAER----LAGKVALVSGGARGMGASHVRSLVAEGAKVVF Mflv_4505|M.gilvum_PYR-GCK ----------MTGR----LAGKVALISGAARGMGASHARVMAGHGAKVVC MSMEG_3515|M.smegmatis_MC2_155 -----------MGR----VAGKVALISGGARGMGAAHARALVAEGAKVVI Mvan_3000|M.vanbaalenii_PYR-1 -----------MGR----VDGKVALISGGAQGMGAADARALIAEGAKVVI MUL_1037|M.ulcerans_Agy99 -----------MGR----VDGKVALISGGARGMGASHARLLVQEGAKVVI MAB_4680c|M.abscessus_ATCC_199 ----------MNGNS-ALLQGKNVIVTGGARGLGAAFSRHIVSQGGRVVI TH_3693|M.thermoresistible__bu -----------VSL----LAGQTAVVTGGARGLGYAIAERFIAEGARVVI MLBr_01807|M.leprae_Br4923 MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV . .: :::*. :*:* : . : .* :*. Mb2025|M.bovis_AF2122/97 GDILDEEGKAVAAELA----DAARYVHLDVTQPAQWTAAVDTAVTAFGGL Rv2002|M.tuberculosis_H37Rv GDILDEEGKAVAAELA----DAARYVHLDVTQPAQWTAAVDTAVTAFGGL MMAR_2981|M.marinum_M GDILDDEGRAVAAELG----DAARYVHLDVTQPEQWTAAVDTAVNEFGGL MAV_2509|M.avium_104 GDILDDEGKAVAAEVG----EATRYLHLDVTKPEDWDAAVATALAEFGRI Mflv_4505|M.gilvum_PYR-GCK GDILDSDGEAVAAELG----DAARYVHLDVTSPDDWDRAVAAAVADFGGL MSMEG_3515|M.smegmatis_MC2_155 GDILDDEGAALAAELG----DAARYVHLDVTQAEDWDTAVATATTDFGLL Mvan_3000|M.vanbaalenii_PYR-1 GDILDDKGKALADEINAETPDSIRYVHLDVTQADQWEAAVATAVDAFGKL MUL_1037|M.ulcerans_Agy99 GDILDEEGKALAEEIG----DAARYVHLDVTQPDQWEAAVATAVDEFGKL MAB_4680c|M.abscessus_ATCC_199 ADVLDGDGRQLAAELG----DAARFTHLDVTDAEQWRELIDTTLAGFGTI TH_3693|M.thermoresistible__bu GDIDESATRAAADSLGG--ADVAVGMRCDVTRSDEVEALVGAAVKRFGSL MLBr_01807|M.leprae_Br4923 THRASVVP------------DWFFGVECDVTDNDAIGAAFKAVEEHQGPV . . : . *** . :. * : Mb2025|M.bovis_AF2122/97 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR Rv2002|M.tuberculosis_H37Rv HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR MMAR_2981|M.marinum_M HVLVNNAGILNIGTIEDYALSEWQRILDINVTGVFLGIRAAVKPMKEAGR MAV_2509|M.avium_104 DVLVNNAGIINIGTLEDYALSEWQRILDINLTGVFLGIRAVVKPMKKAGR Mflv_4505|M.gilvum_PYR-GCK DVLVNNAGILNIGTVEDYELSEWHRILDVNLTGVFLGIRAATPTMKAAGR MSMEG_3515|M.smegmatis_MC2_155 NVLINNAGIVALGAIGKFDMTKWQNVIDVNLTGTFLGMQASVGAMKAAGG Mvan_3000|M.vanbaalenii_PYR-1 NVLVNNAGTVALGQIGQFDMAKWQKVIDVNLTGTFLGMQASVEAMKTAGG MUL_1037|M.ulcerans_Agy99 DVLVNNVGIVALGQLKKFDLGKWQKVIDVNLTGTFLGMRAAVEPMTAAGS MAB_4680c|M.abscessus_ATCC_199 TGLVNNAGISSAAMVADEPLEHFRKVIEINLVGVFIGMQAVIPAMRAHGC TH_3693|M.thermoresistible__bu DVMVNNAGITRDATMRKMTEQQFDEVIAVHLKGTWNGLRAAAAIMREQKR MLBr_01807|M.leprae_Br4923 EVLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQRF :: *.* : .: .:: ::: *.: : * Mb2025|M.bovis_AF2122/97 GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH Rv2002|M.tuberculosis_H37Rv GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH MMAR_2981|M.marinum_M GSIINISSIEGLAGTIASHGYTVSKFAVRGLTKSTALELGPSGIRVNSIH MAV_2509|M.avium_104 GSIINISSIEGMAGTIACHGYTATKFAVRGLTKSAALELGPSGIRVNSIH Mflv_4505|M.gilvum_PYR-GCK GSIINIASIEGMAGTVGCHGYTATKFAVRGLTKSTALELGPFGIRVNSVH MSMEG_3515|M.smegmatis_MC2_155 GSIINVSSIEGLRGAPMVHPYVASKWAVRGLTKSAALELGAHQIRVNSIH Mvan_3000|M.vanbaalenii_PYR-1 GSIINISSIEGLRGAVMVHPYVASKWAVRGLTKSAALELGSHNIRVNSVH MUL_1037|M.ulcerans_Agy99 GSIINVSSIEGLRGAPAVHPYVASKWAVRGLTKSAALELAPLNIRVNSIH MAB_4680c|M.abscessus_ATCC_199 GSIVNISSAAGLVGLALTSGYGASKWGVRGLSKVAAIELGRERIRVNSVH TH_3693|M.thermoresistible__bu GAIVNMSSISGKVGMVGQTNYSAAKAGIVGMTKAASKELAYLGVRVNAIQ MLBr_01807|M.leprae_Br4923 GRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVVA * : :.* * * * .:* .: *::: : **. : .* : Mb2025|M.bovis_AF2122/97 PGLVKTPMTDWV-----PEDIFQTALGRAAEPVEVSNLVVYLASDESSYS Rv2002|M.tuberculosis_H37Rv PGLVKTPMTDWV-----PEDIFQTALGRAAEPVEVSNLVVYLASDESSYS MMAR_2981|M.marinum_M PGLVKTPMTEWV-----PEDLFQTALGRAAEPMEVSNLVVYLASDESSYS MAV_2509|M.avium_104 PGLIKTPMTEWV-----PEDIFQSALGRAAEPKEVSNLVVYLASDESSYS Mflv_4505|M.gilvum_PYR-GCK PGLVKTPMADWV-----PEDIFQSALGRIAQPHEVSNLVVYLASDESSYS MSMEG_3515|M.smegmatis_MC2_155 PGFIRTPMTEHF-----PDDMLRIPLGRPGEVDEVSSFVVFLASDESRYA Mvan_3000|M.vanbaalenii_PYR-1 PGFIRTPMTKHF-----PDNMLRIPLGRPGQPEEVATFVVFLASDESRYA MUL_1037|M.ulcerans_Agy99 PGFIRTPMTANL-----PDDMVTIPLGRPAESREVSTFVVFLASDDASYA MAB_4680c|M.abscessus_ATCC_199 PGVIYTPMTAKEGFREGEGNMPIAAMGRVGNADEVAGAVAYLLSDAASYV TH_3693|M.thermoresistible__bu PGLIRSAMTEAMPQRIWDEKLAEIPMGRAGEPEEVAKVALFLASDLSSYM MLBr_01807|M.leprae_Br4923 PGFIDTEMTRAMDSKYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGYI **.: : *: : .:** . *:: . :* *: : * Mb2025|M.bovis_AF2122/97 TGAEFVVDGGTVAGLAHNDFGAVEVSSQPEWVT Rv2002|M.tuberculosis_H37Rv TGAEFVVDGGTVAGLAHNDFGAVEVSSQPEWVT MMAR_2981|M.marinum_M TGAEFVVDGGTVAGLAHKDFSAVDVAAQPEWVT MAV_2509|M.avium_104 TGSEFVVDGGTTAGLGHKDFSNVETDAQPDWVT Mflv_4505|M.gilvum_PYR-GCK TGAEFVVDGGTLAGLAHKDFSAVDVDQQPEWIT MSMEG_3515|M.smegmatis_MC2_155 TGAEFVMDGGLVNDVPHKL-------------- Mvan_3000|M.vanbaalenii_PYR-1 TGAEFVMDGGLTNDVPHK--------------- MUL_1037|M.ulcerans_Agy99 TGSEFVMDGGLVTDVPHKQF------------- MAB_4680c|M.abscessus_ATCC_199 TGAELAVDGGWTAGPTLTTITGQ---------- TH_3693|M.thermoresistible__bu TGTVLEVTGGRHL-------------------- MLBr_01807|M.leprae_Br4923 SGAVIPVDGGLGMGH------------------ :*: : : **