For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDTIDATVQSAGLAQPYRARRQNWCNQLARHALMQPDATAIRYLGHSISWAELHQRVQALADALSRRGVG FGDRVLILMLNRPEYVESWLAINELGAIAIPVNFRMTPPEVAFLVENSGAKVAITETVLAPVAAAVRQQA PALETVIVAGSASENGVLGYEEVIAEPGEPHAEVDLPGDTPALIMYTSGTTGRPKGAVLTHLNLSGQAMT YLLSTTVDLNSDVGFIGVPMFHIAGVGNMITGLLLGLPTVIHPLGAFDPGALLDVLESEGVTGIFLVPAQ WQAVCAAQQANPRKVRLKTLSWGAAPATDVLLRTMSETFPDARILAAFGQTEMSPVTCMLMGDDAIRKMG SVGRVIPTVSARVVDDNMNDVPVGEVGEIVYRAPTLMQGYWNNPEATADAFAGGWFHSGDLVRQDEDGFV WVVDRKKDMIISGGENIYCAEVENALAEHEQIAEVAVIGRPHEKWGEVPVAVAAIHGAALTLAELDGFLT ARLARYKHPKDLVIVDALPRNPSGKVLKTELRQRFGIAD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4569c | - | - | 100% (530) | fatty-acid-CoA ligase FadD |
M. abscessus ATCC 19977 | MAB_4559 | - | 1e-81 | 36.04% (505) | putative long-chain-fatty-acid CoA ligase |
M. abscessus ATCC 19977 | MAB_3592c | - | 7e-63 | 33.86% (502) | putative medium-chain acyl-CoA ligase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0172 | fadD5 | 0.0 | 73.24% (512) | acyl-CoA synthetase |
M. gilvum PYR-GCK | Mflv_0714 | - | 0.0 | 71.68% (519) | acyl-CoA synthetase |
M. tuberculosis H37Rv | Rv0166 | fadD5 | 0.0 | 73.44% (512) | acyl-CoA synthetase |
M. leprae Br4923 | MLBr_02546 | fadD2 | 4e-43 | 28.66% (485) | acyl-CoA synthetase |
M. marinum M | MMAR_0409 | fadD5 | 0.0 | 73.79% (515) | fatty-acid-CoA ligase FadD5 |
M. avium 104 | MAV_5018 | - | 0.0 | 74.61% (512) | acyl-CoA synthetase |
M. smegmatis MC2 155 | MSMEG_0131 | - | 0.0 | 75.10% (526) | acyl-CoA synthetase |
M. thermoresistible (build 8) | TH_2878 | - | 0.0 | 73.94% (518) | PUTATIVE AMP-binding enzyme, putative |
M. ulcerans Agy99 | MUL_0650 | fadD8 | 2e-57 | 31.75% (504) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_0131 | - | 0.0 | 71.59% (535) | acyl-CoA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0172|M.bovis_AF2122/97 -------------------MTAQLASHLTRALTLAQQQPYLARRQNWVNQ Rv0166|M.tuberculosis_H37Rv -------------------MTAQLASHLTRALTLAQQQPYLARRQNWVNQ MMAR_0409|M.marinum_M -------------------MTAELASHLPQAA-HALEQPYLARRQNWVNQ MAV_5018|M.avium_104 --------------------MLSLTAQLAHHPTQANEQPYLSRRQNWVNQ Mflv_0714|M.gilvum_PYR-GCK MTRTTSCLIKCHTSANPSTMERKTLTDPTGLSGSATEQPNLARRRNWANQ Mvan_0131|M.vanbaalenii_PYR-1 -------MFDQISSFRNPSMEQKTLTEAIQQPGFATEQPYLARRQNWTNQ MSMEG_0131|M.smegmatis_MC2_155 ----------------------------MTAEPSQIEQPYLARRQNWVNQ TH_2878|M.thermoresistible__bu -----------------------------------LQQPYLARRQNWVNH MAB_4569c|M.abscessus_ATCC_199 ----------------------MTDTIDATVQSAGLAQPYRARRQNWCNQ MUL_0650|M.ulcerans_Agy99 ------------------------------------MSDDLLRNPTHNGH MLBr_02546|M.leprae_Br4923 MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVAMRKWGDLAM *. Mb0172|M.bovis_AF2122/97 LERHAMMQPDAPALRFVG-NTMTWADLRRRVAALAGALSGRGVGFGDRVM Rv0166|M.tuberculosis_H37Rv LERHAMMQPDAPALRFVG-NTMTWADLRRRVAALAGALSGRGVGFGDRVM MMAR_0409|M.marinum_M LERHAMMQPRATAIRYLG-HTVTWADLRYRVAALAGSLSRRGVGFGDRVM MAV_5018|M.avium_104 LERHALMQPNATALRFLG-KGLTWGELHGRVRALADALSRRGVGFGDRVM Mflv_0714|M.gilvum_PYR-GCK LSRHALMQPDTVALRFLG-RSTTWGELDRRVTALAGALHERGVGFGDRVL Mvan_0131|M.vanbaalenii_PYR-1 LARHALMQPDQPALRFLG-NTTTWGELDRRVSALAGALHKRGVGFGDRVL MSMEG_0131|M.smegmatis_MC2_155 LTRHAMMQPDKTALRFLG-RTTTWRELDDRVTRLAGALNRRGVGFGDRVL TH_2878|M.thermoresistible__bu LARHALMQPDATALRFMG-QTTTWADLHHRVNRLAGALRRRGVEFGDRVL MAB_4569c|M.abscessus_ATCC_199 LARHALMQPDATAIRYLG-HSISWAELHQRVQALADALSRRGVGFGDRVL MUL_0650|M.ulcerans_Agy99 LLVGALERHKNRPVLFLGDTTLTGGQLAERISQYIQAFEALGAGTGVTVG MLBr_02546|M.leprae_Br4923 LPAMPARRSPHRAALIDEEGTLTYKELDRAAHALANGLIAKGVRGGDGIA * . : . : :* .: *. * : Mb0172|M.bovis_AF2122/97 ILMLNRTEFVESVLAANMIGAIAVPLNFRLTPTEIAVLVEDCAAHVMLTE Rv0166|M.tuberculosis_H37Rv ILMLNRTEFVESVLAANMIGAIAVPLNFRLTPTEIAVLVEDCVAHVMLTE MMAR_0409|M.marinum_M ILMLNRTEFVESVLAANMLGAIAVPLNFRLTPSEIAFLVEDCAPRLVITE MAV_5018|M.avium_104 VLMLNRPEFMESVLAINMLGAIAVPLNFRLTAAEIAFLVQDCQARVVITE Mflv_0714|M.gilvum_PYR-GCK ILMLNRTEFMESVLAVNKLGGIAVPVNFRMTPSEIAFLVSDCAAEVVITE Mvan_0131|M.vanbaalenii_PYR-1 ILMLNRTEFIEAVLATNKLGAIAVPVNFRMTPAEIAFLVSDCEAKAIITE MSMEG_0131|M.smegmatis_MC2_155 ILMLNRTEFVEAMLAANRLGAIAVPVNFRMTPPEIAYLVSDCEAHVVVTE TH_2878|M.thermoresistible__bu ILMLNRTEFIETMLAANRLGAIAVPVNFRMTPPEIAFLAKDCEAKVIATE MAB_4569c|M.abscessus_ATCC_199 ILMLNRPEYVESWLAINELGAIAIPVNFRMTPPEVAFLVENSGAKVAITE MUL_0650|M.ulcerans_Agy99 LLSLNRPEVLMILGASQARGYRRTALHPLGSLDDHAYVLYDAGASALIID MLBr_02546|M.leprae_Br4923 ILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSEREGAKVIIYD :* *: : . * :: : : : . : Mb0172|M.bovis_AF2122/97 A--ALAPVAIGVRNIQPLLSVIVVAG---GSSQDSVFGYEDLLNEAG-DV Rv0166|M.tuberculosis_H37Rv A--ALAPVAIGVRNIQPLLSVIVVAG---GSSQDSVFGYEDLLNEAG-DV MMAR_0409|M.marinum_M E--VLAQVAVGVREIAPALSTIVVAG---GASDPTVVGYDELISETG-DP MAV_5018|M.avium_104 A--VLAPVATGVRDIESLLDTVVVAG---GSSDDAVLGYDDLIDETG-AA Mflv_0714|M.gilvum_PYR-GCK S--VLENVATAVRDIDPKLATVIVAG---GTSRDNVLDYDDVLASTT-AA Mvan_0131|M.vanbaalenii_PYR-1 A--VLANVATAVRDIDPTLATVISAG---GSG-DDVLDYDDVLAENA-PC MSMEG_0131|M.smegmatis_MC2_155 P--VLAGVATAVRDLDATLQTVIVAGGATEDG---VLGYDDLIAEEG-EP TH_2878|M.thermoresistible__bu P--VLAGVATAVRDLAPSLSSVIVAGAADGSDTPDVLDYEALIAEPG-ED MAB_4569c|M.abscessus_ATCC_199 T--VLAPVAAAVRQQAPALETVIVAG---SASENGVLGYEEVIAEPG-EP MUL_0650|M.ulcerans_Agy99 PNPMFVERALGLLEKVDSLEQVLTIGPVPEALEDRAVDLSAEAAKYQPKP MLBr_02546|M.leprae_Br4923 D-----EYTKVVSKAEPALGKLRALGVNPDEEEPPGSTDETLAELIARSS : : . * : * . Mb0172|M.bovis_AF2122/97 HEPVDIPNDSPALIMYTAGTTGRPKGAVLTHANLTGQAMTALYTSGANIN Rv0166|M.tuberculosis_H37Rv HEPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTALYTSGANIN MMAR_0409|M.marinum_M PEPVDIPNDSPALIMYTSGTTGRPKGAVLTHTNLTGQVMTALYTGGANIN MAV_5018|M.avium_104 HQPVDIPNDAAALIMYTSGTTGRPKGAVLTHTNLTGQTMTGLYTNGADIN Mflv_0714|M.gilvum_PYR-GCK PPLVDIPDDSPALIMYTSGTTGRPKGAVLTHNNLAGQAMTLLFTNGADIN Mvan_0131|M.vanbaalenii_PYR-1 P-VVDIPNDAPALIMYTSGTTGRPKGAVLTHTNLTGQVMTLLFTNGADIN MSMEG_0131|M.smegmatis_MC2_155 PAPVDIPNDSPALIMYTSGTTGRPKGAVLTHTNLSAQAMMHLFTTGADLN TH_2878|M.thermoresistible__bu PPPVDIPDDSPALIMYTSGTTGNPKGAVLTHSNLTGQAMTNLFTIGVDLA MAB_4569c|M.abscessus_ATCC_199 HAEVDLPGDTPALIMYTSGTTGRPKGAVLTHLNLSGQAMTYLLSTTVDLN MUL_0650|M.ulcerans_Agy99 LVVADLPPNHIGGLTYTGGTTGKPKGVIGTAGNIT--AMTSIQLAEWEWP MLBr_02546|M.leprae_Br4923 SAPAPKVRKRASIIILTSGTTGTPKGANR-NTPASLAPLGGILSKVPFRA . . . : *.**** ***. : : : Mb0172|M.bovis_AF2122/97 SDVGFVGVPLFHIAGIG-NMLTGLLLGLPTVIYPLGAFDPGQLLDVLEAE Rv0166|M.tuberculosis_H37Rv SDVGFVGVPLFHIAGIG-NMLTGLLLGLPTVIYPLGAFDPGQLLDVLEAE MMAR_0409|M.marinum_M SDVGFIGVPFFHIAGIG-NMLSGMLLGVPTVIYPLGAFNPGQLLDVLEAE MAV_5018|M.avium_104 NDVGFIGVPFFHIAGIG-NMLTGLLLGIPTVIYPLGAFEPGQLLDVLAAE Mflv_0714|M.gilvum_PYR-GCK HDIGFIGVPFFHIAGVG-SIVSGMMLGRPTVIYPLGAFDPNELLDVLEAE Mvan_0131|M.vanbaalenii_PYR-1 HDIGFIGVPFFHIAGVG-SSVSGLLLGRPTVLYPVGAFDPNELLDVLEAE MSMEG_0131|M.smegmatis_MC2_155 SDVGFVGVPLFHIAGVAGSVLSGVTLGVPTVLYPLGAFDPDGLLDVLESE TH_2878|M.thermoresistible__bu NDVGFIGVPLFHIAGIAGNVLSGLTLGLPTVLYPLGAFDPGGLLDVLEAE MAB_4569c|M.abscessus_ATCC_199 SDVGFIGVPMFHIAGVG-NMITGLLLGLPTVIHPLGAFDPGALLDVLESE MUL_0650|M.ulcerans_Agy99 EHPRFLMCTPLSHAGAAFFTPTLVKGGE---MIVLAKFDPGEVLRVIEEQ MLBr_02546|M.leprae_Br4923 HEVTLLPAPMFHALGYLHATLAMFLGST---LVLRRRFKPATVLEDIEKH . :: . : * : . . : *.* :* : . Mb0172|M.bovis_AF2122/97 KVTGIFLVPAQWQAVCTEQQ--ARPRDLR-LRVLSWGAAPAPDALLRQMS Rv0166|M.tuberculosis_H37Rv KVTGIFLVPAQWQAVCTEQQ--ARPRDLR-LRVLSWGAAPAPDALLRQMS MMAR_0409|M.marinum_M RVSGIFLVPAQWQAVCAEQQ--ARPRELS-LRVMSWGAAPAPDALLRQMS MAV_5018|M.avium_104 KVTGIFLVPAQWQAVCAEQR--ARPRDLK-LRVISWGAAPAPDALLREMS Mflv_0714|M.gilvum_PYR-GCK KVTGIFLVPAQWQAVCAAQK--ANPRNLK-LRFLSWGAAPASDTLLRQMS Mvan_0131|M.vanbaalenii_PYR-1 KVTGIFLVPAQWQAVCAAQK--ARPRDLK-LRFLSWGAAPASDTLLREMA MSMEG_0131|M.smegmatis_MC2_155 QVTGIFLVPAQWQAVCAAQR--ARPRNLK-LRALSWGAAPASDTLLREMN TH_2878|M.thermoresistible__bu KVTGIFLVPAQWQAVCAEQR--ARPRDLR-LRALSWGAAPASDTLLQEMT MAB_4569c|M.abscessus_ATCC_199 GVTGIFLVPAQWQAVCAAQQ--ANPRKVR-LKTLSWGAAPATDVLLRTMS MUL_0650|M.ulcerans_Agy99 RITATMLVPSMLYALMDHPD--PHTRDLSSLETVYYGASAINPVRLAEAI MLBr_02546|M.leprae_Br4923 QATAMVVVPVMLSRILDTLENLETKSDLSSLRVVFVSGSQLGAELATRAL :. .:** : .: *. : ..: Mb0172|M.bovis_AF2122/97 ATFPETQILAAFGQTEMSPVTCMLLGEDAIAKRGSVGRVIPTVAARVVDQ Rv0166|M.tuberculosis_H37Rv ATFPETQILAAFGQTEMSPVTCMLLGEDAIAKRGSVGRVIPTVAARVVDQ MMAR_0409|M.marinum_M EVFPGTQIMAAFGQTEMSPVTCMLLGEDAIRKRGSVGKVIPTVSARVVDD MAV_5018|M.avium_104 AMFPGTQILAAFGQTEMSPVTCMLLGEDAIRKRGSVGKVIPTVAARVVDE Mflv_0714|M.gilvum_PYR-GCK ETFPGAQILAAFGQTEMSPVTCMLLGDDALRKLGSVGKVIPTVSARIVDE Mvan_0131|M.vanbaalenii_PYR-1 ETFPGAQILAAFGQTEMSPVTCMLLGDDAIRKLGSVGKVIPTVSARIVDE MSMEG_0131|M.smegmatis_MC2_155 EVFPDAQIFAAFGQTEMSPVTCMLLGDDAIRKLGSVGRVIPTVSARVVDD TH_2878|M.thermoresistible__bu EVFPGTKIFAAFGQTEMSPVTCMLLAEDAVRKLGSVGKVIPTVAARIVDD MAB_4569c|M.abscessus_ATCC_199 ETFPDARILAAFGQTEMSPVTCMLMGDDAIRKMGSVGRVIPTVSARVVDD MUL_0650|M.ulcerans_Agy99 DRFGPIFAQYYGQSEAPMVITYLPKADHDEKRLTSCGRPTLFARVALLGE MLBr_02546|M.leprae_Br4923 EELG-PVIYNMYGSTEIAFATIAGPKDLQINS-ATVGPVVKGVKVKILDD : . * : : * . . ::.: Mb0172|M.bovis_AF2122/97 NMNDVPVGEVGEIVYRAPTLMSCYWNNPEATAEAFAGGWFHSGDLVRMDS Rv0166|M.tuberculosis_H37Rv NMNDVPVGEVGEIVYRAPTLMSCYWNNPEATAEAFAGGWFHSGDLVRMDS MMAR_0409|M.marinum_M EMNDVPIGQVGEIVYRAPTLMSGYWNNPDATAEAFAGGWFHSGDLVRMDE MAV_5018|M.avium_104 NMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRMDE Mflv_0714|M.gilvum_PYR-GCK DMNDVPIGQVGEIVYRAPTLMTGYWNNPTATAEAFAGGWFHSGDLVRQDE Mvan_0131|M.vanbaalenii_PYR-1 DMNDVPVGQVGEIVYRAPTLMAGYWNNPKATAEAFAGGWFHSGDLVRQDE MSMEG_0131|M.smegmatis_MC2_155 NMNDVPVGEVGEIVYRGPNLMVGYWNNPKATAEAFAGGWFHSGDLVRQDE TH_2878|M.thermoresistible__bu TMNDVPVGEVGEIVYRAPTLMAGYWNNPQATAEAFAGGWFHSGDLVRQDE MAB_4569c|M.abscessus_ATCC_199 NMNDVPVGEVGEIVYRAPTLMQGYWNNPEATADAFAGGWFHSGDLVRQDE MUL_0650|M.ulcerans_Agy99 DGKPVPQGEPGEICVSGPLLAGGYWNKPDDTAQTFRDGWLHTGDMAREDE MLBr_02546|M.leprae_Br4923 SGKEVPRGQVGRIFVGNAFPFEGYTG---GGGKQIIDGLLSSGDVGYFDE : ** *: *.* . * . .. : .* : :**: *. Mb0172|M.bovis_AF2122/97 DGYVWVVDRKKDMIISGGENIYCAELENVLASHPDIAEVAVIGRADEKWG Rv0166|M.tuberculosis_H37Rv DGYVWVVDRKKDMIISGGENIYCAELENVLASHPDIAEVAVIGRADEKWG MMAR_0409|M.marinum_M DGYVWVVDRKKDMIISGGENVYCAEVENVLASHPSIVEVAVIGRADEKWG MAV_5018|M.avium_104 DGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRAHEKWG Mflv_0714|M.gilvum_PYR-GCK EGYIWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRSHRKWG Mvan_0131|M.vanbaalenii_PYR-1 EGYIWVVDRKKDMIISGGENIYCAEVENVLAAHPEIVEVAVIGRAHEKWG MSMEG_0131|M.smegmatis_MC2_155 EGYVWVVDRKKDMIISGGENIYCAEVENVLAAHPAIMEVAVIGRPHEKWG TH_2878|M.thermoresistible__bu EGYIWVVDRKKDMIISGGENIYCAEVENVLAAHPAVAEVAVVGRPHEKWG MAB_4569c|M.abscessus_ATCC_199 DGFVWVVDRKKDMIISGGENIYCAEVENALAEHEQIAEVAVIGRPHEKWG MUL_0650|M.ulcerans_Agy99 DGFYFIVDRVKDMIVTGGFNVFPREVEDVVAEHSAVAQVCVVGAPDEKWG MLBr_02546|M.leprae_Br4923 HDLLYISGRDDEMIVSGGENVFPAEVEDLISGHPEVVEATAIGVDDKEWG .. :: .* .:**::** *:: *:*: :: * : :. .:* ..:** Mb0172|M.bovis_AF2122/97 EVPIAVAAVTN--------DDLRIEDLGEFLTDRLARYKHPKALEIVDAL Rv0166|M.tuberculosis_H37Rv EVPIAVAAVTN--------DDLRIEDLGEFLTDRLARYKHPKALEIVDAL MMAR_0409|M.marinum_M EVPIAVAAVTK--------DHLRIEDLDEYLTERLARYKHPKALEIVDAL MAV_5018|M.avium_104 EVPIAVAAVAN--------DNLALEDLDEFLTERLARYKHPKALEIVDAL Mflv_0714|M.gilvum_PYR-GCK EVPVAVAVLRSSLN-STGSGRLELTDLEQFLGDRLARYKHPKAIEIVEAL Mvan_0131|M.vanbaalenii_PYR-1 EVPVAVAVVRSSLE-ATPGAGIELADLEQFLTERLARYKHPKALEIVDAL MSMEG_0131|M.smegmatis_MC2_155 EVPVAVVALNS-----ATAESISLGELDSFLTERLARYKHPKALEVVDAL TH_2878|M.thermoresistible__bu EVPVAVVALN-------PDAELTMAELEEFLADRLARYKHPKVLEIVDAL MAB_4569c|M.abscessus_ATCC_199 EVPVAVAAIHG--------AALTLAELDGFLTARLARYKHPKDLVIVDAL MUL_0650|M.ulcerans_Agy99 EAVTAVVVLRADAARDDAAIETMTAEIQAAVKQRKGSVQSPKQVVVVDSL MLBr_02546|M.leprae_Br4923 ARLRAFVVKKQ-------DATIDEDAIKAYVRDHLARYKVPREVIFLEEL *... : : : . : *: : .:: * Mb0172|M.bovis_AF2122/97 PRNPAGKVLKTELRLRYGACVNVERRSASAGFTERRENRQKL Rv0166|M.tuberculosis_H37Rv PRNPAGKVLKTELRLRYGACVNVERRSASAGFTERRENRQKL MMAR_0409|M.marinum_M PRNPSGKVLKTELRLRYGVGVYSESRSVSRSFEFREGS---- MAV_5018|M.avium_104 PRNPAGKVLKTELRIRYGGG---------------------- Mflv_0714|M.gilvum_PYR-GCK PRNPAGKVLKTELRVRFGSEESVDAGESATAATSSAAAPKD- Mvan_0131|M.vanbaalenii_PYR-1 PRNPAGKVLKTELRIRYSAASFADAGESSTPPTISTAPQRN- MSMEG_0131|M.smegmatis_MC2_155 PRNPSGKVLKTELRERFGRATSLDGGESNSATTVSAG----- TH_2878|M.thermoresistible__bu PRNPAGKVLKTELRARFAAGPSAEKEQSSSGATTSAGSS--- MAB_4569c|M.abscessus_ATCC_199 PRNPSGKVLKTELRQRFGIAD--------------------- MUL_0650|M.ulcerans_Agy99 PLTGLGKPDKKAVRARFWEGAGRAVG---------------- MLBr_02546|M.leprae_Br4923 PRNPTGKVLKRELRDFEVH----------------------- * . ** * :*