For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4199 (-)

annotation: putative oxidoreductase
coordinates: 4264353 - 4265534
length: 393

MTDQHPHVVVLGGGYAGTMAANRLQQHTNIDITLVNPREEFVHRLRLHQFAAGTGIATAEYAPMLGKRVR
LVVDSAVRIDAPARMIRLESGDVLDYDYLIYAIGSTDSTAAGVPGLSEFAYPLSEFESAQRLRVALETSG
PDVQITVVGAGLTGIEMASELADLGRHVRLVCGGQLAPTFGAPARRTIAQWFARRRVDVLENTSVTEVRP
DSVVLADGTALSSAITVWAGGFGVPALAAHSGLSVDADGRLLTDDTLTSMDDGRIIGAGDAVTTTSLPTR
MSCYTANTTGAAAADTVLSRLADTEPAPFRLAYVGQCLSLGRRNAVLQFTRKDDSPVGAHARGRLTAWFK
EFVLTGVPWGLRREGRKPGASVWFKSRPRPAEAAQHRAEVVQS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4199--100% (393)putative oxidoreductase
M. abscessus ATCC 19977MAB_1127c-7e-9148.83% (383) putative oxidoreductase
M. abscessus ATCC 19977MAB_2429c-2e-1424.53% (375) NADH dehydrogenase (NDH)

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1842c-5e-2429.63% (351) dehydrogenase
M. gilvum PYR-GCKMflv_1928-1e-9046.29% (404) FAD-dependent pyridine nucleotide-disulphide oxidoreductase
M. tuberculosis H37RvRv1812c-5e-2429.63% (351) dehydrogenase
M. leprae Br4923MLBr_02061-9e-1525.47% (373) putative dehydrogenase
M. marinum MMMAR_4486-1e-10651.66% (391) dehydrogenase
M. avium 104MAV_1130-1e-11155.61% (383) dehydrogenase
M. smegmatis MC2 155MSMEG_6818-1e-12257.99% (369) dehydrogenase
M. thermoresistible (build 8)TH_1143-1e-13161.54% (390) dehydrogenase
M. ulcerans Agy99MUL_4658-1e-10651.41% (391) dehydrogenase
M. vanbaalenii PYR-1Mvan_5348-1e-11955.96% (386) FAD-dependent pyridine nucleotide-disulphide oxidoreductase

CLUSTAL 2.0.9 multiple sequence alignment


Mb1842c|M.bovis_AF2122/97           -------------------------------------MTRVVVIGSGFAG
Rv1812c|M.tuberculosis_H37Rv        -------------------------------------MTRVVVIGSGFAG
MAB_4199|M.abscessus_ATCC_1997      ---------------------MT------------DQHPHVVVLGGGYAG
TH_1143|M.thermoresistible__bu      VACVTLKVVLSHLRRDRDLKGMTGHNARTPEIGRDTRGPKVVVIGGGYAG
MSMEG_6818|M.smegmatis_MC2_155      ---------------------MTAH----------NKTHRVVVIGGGYAG
MMAR_4486|M.marinum_M               ---------------------MSEM---------TEDRNHVVVIGGGYAG
MUL_4658|M.ulcerans_Agy99           ---------------------MSEM---------TEDRNHVVVIGGGYAG
MAV_1130|M.avium_104                ---------------------MTEV---------TRSKTHVVVVGGGYAG
Mflv_1928|M.gilvum_PYR-GCK          ------------------------M---------TAQNIRVIVVGGGYAG
Mvan_5348|M.vanbaalenii_PYR-1       ---------------------MTDH---------KAP-TKVVVIGGGYSG
MLBr_02061|M.leprae_Br4923          ---------------------MNAQP---AATAAQDRRHQVVIIGSGFGG
                                                                           :*:::*.*:.*

Mb1842c|M.bovis_AF2122/97           LWAALGAARRLDELAVPAGTVDVMVVSNKPFHDIRVRNYEADLS------
Rv1812c|M.tuberculosis_H37Rv        LWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLS------
MAB_4199|M.abscessus_ATCC_1997      TMAANRLQQHTNIDITLVNPREEFVHR------LRLHQFAAGTG------
TH_1143|M.thermoresistible__bu      TLAANRLQRRADVDITLVNARPTMVQR------LQLHRLAAGTADA----
MSMEG_6818|M.smegmatis_MC2_155      TLAANRLQQNPDIDITLINPRPQFVHR------MRLHQMAAGAC------
MMAR_4486|M.marinum_M               IMAANHLRSRADLEITVVNPRPVFVER------IRLHQLAAGSG------
MUL_4658|M.ulcerans_Agy99           IMAANHLRSRADLEITVVNPRPVFVER------IRLHQLAAGSG------
MAV_1130|M.avium_104                TLAANHLRQRPDIDITLVNPRPVFVER------IRLHQLVADTG------
Mflv_1928|M.gilvum_PYR-GCK          VMAANRLRSRDDLHVTLVNPRPQFVER------IRLHQLAADAGGTAGRA
Mvan_5348|M.vanbaalenii_PYR-1       TLAANHLRLRSDVDITLVNPRPKFVER------IRLHQLAAAGR------
MLBr_02061|M.leprae_Br4923          LNAAKKLKR-ANVDIKLIARTTHHLFQP------LLYQVATGIISE----
                                      **       :            :          : .  :         

Mb1842c|M.bovis_AF2122/97           ----------------------------ACRIPLGDVLGP-AGVAHVTAE
Rv1812c|M.tuberculosis_H37Rv        ----------------------------ACRIPLGDVLGP-AGVAHVTAE
MAB_4199|M.abscessus_ATCC_1997      ----------------------------IATAEYAPMLG--KRVRLVVDS
TH_1143|M.thermoresistible__bu      ---------------------------DEVTADYRGLLG--ARVRLVVGE
MSMEG_6818|M.smegmatis_MC2_155      ----------------------------EAVVDYGTLLG--SGVRLLADR
MMAR_4486|M.marinum_M               ----------------------------TATVDYDSMLG--DGIHLVVDA
MUL_4658|M.ulcerans_Agy99           ----------------------------TATVDYDSMLG--DGIHLVVDA
MAV_1130|M.avium_104                ----------------------------TATADYATLLG--EGIELIVDT
Mflv_1928|M.gilvum_PYR-GCK          KRRGTSTAGRAKRRGTSTAGRAKRRGTSSAVAEFGAVLN--PGVQLVVDN
Mvan_5348|M.vanbaalenii_PYR-1       ----------------------------DATVDYGTLLG--EGVRLVVDS
MLBr_02061|M.leprae_Br4923          ---------------------------GEIAPPTRVVLRKQRNIQVLLGN
                                                                        :*     :  :   

Mb1842c|M.bovis_AF2122/97           VTAIDADGRRVT---TSTGASYSYDRLVLASG-SHVVKPALPGLAEFGFD
Rv1812c|M.tuberculosis_H37Rv        VTAIDADGRRVT---TSTGASYSYDRLVLASG-SHVVKPALPGLAEFGFD
MAB_4199|M.abscessus_ATCC_1997      AVRIDAPARMIR---LESGDVLDYDYLIYAIGSTDSTAAGVPGLSEFAYP
TH_1143|M.thermoresistible__bu      ATRIDTAARRVQ---LRSGAPLEYDYLIYAVGSTSAVPESVPGAAEFAYP
MSMEG_6818|M.smegmatis_MC2_155      VDRIDTANRRID---LASGDSMGYDYVVYAVGSTALVPESVEGAAEFAHT
MMAR_4486|M.marinum_M               VDRIDADEHRLL---LTSGSELRYDYLIYAVGSTAAMPA-VAGAAEFAFS
MUL_4658|M.ulcerans_Agy99           VDRIDADEHRLL---LTSGSELGYDYLIYAVGSTAAMPA-VAGAAEFAFS
MAV_1130|M.avium_104                VDHIDATARRAV---LTSGAGLDYDYLIYAVGSTGAVAE-VPGCAEFAHS
Mflv_1928|M.gilvum_PYR-GCK          VERIDAPVRRLA---LSSGTSLDYDYLVYAVGSTGAVPDGVPGAAEFAYP
Mvan_5348|M.vanbaalenii_PYR-1       ASRIDTAARKVW---LASGRQLDYVYVVYAVGSTGAPPAGVPGAVEFAYP
MLBr_02061|M.leprae_Br4923          VTHIDLANQCVVSELLGHTYETLYDSLIVAAG-AGQSYFGNDQFAEFAPG
                                    .  **   :              *  :: * * :           **.  

Mb1842c|M.bovis_AF2122/97           VDTYDGAVRLQQHLQGLAGGPLTS-------AAATVVVVGAGLTGIETAC
Rv1812c|M.tuberculosis_H37Rv        VDTYDGAVRLQQHLQGLAGGPLTS-------AAATVVVVGAGLTGIETAC
MAB_4199|M.abscessus_ATCC_1997      LSEFESAQRLRVALETSG-------------PDVQITVVGAGLTGIEMAS
TH_1143|M.thermoresistible__bu      MADFESAQRLRAVVDELP-------------AQAWITVVGAGLTGIEIAA
MSMEG_6818|M.smegmatis_MC2_155      VAEYEAAQRLRATVNALA-------------PDAWITVVGAGFTGIEVAA
MMAR_4486|M.marinum_M               VADLDGATRLRHAMADLP-------------ADAAITVVGGGLTGIEAAA
MUL_4658|M.ulcerans_Agy99           VADLDGATRLRHAMADLP-------------ADAAITVVGGGLTGIEAAA
MAV_1130|M.avium_104                VADLESAQRLHYALADLP-------------LPAPITVVGGGLTGIETAS
Mflv_1928|M.gilvum_PYR-GCK          LAELEQAQRLRSRLADVA-------------AIAPVVVIGGGLTGIEAAA
Mvan_5348|M.vanbaalenii_PYR-1       VAELEQADRLRAALDDLH-------------PAAPVTVVGAGLTGTETAA
MLBr_02061|M.leprae_Br4923          MKSIDDALELRGRILSAFEQAERSNDPERREKLLTFTVVGAGPTGVEMAG
                                    :   : * .*:  :                     ..*:*.* ** * * 

Mb1842c|M.bovis_AF2122/97           ELPGRLHALFA----RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALL
Rv1812c|M.tuberculosis_H37Rv        ELPGRLHALFA----RGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALL
MAB_4199|M.abscessus_ATCC_1997      ELAD----------------LGRHVRLVCGGQLAPTFGAPARRTIAQWFA
TH_1143|M.thermoresistible__bu      ELAE----------------QDRTVSLVCGGRLAPAFGEPARRSIAAWLT
MSMEG_6818|M.smegmatis_MC2_155      ELAT----------------GGRTVSLVAGAQLAPTLGGPARRAVSRWMA
MMAR_4486|M.marinum_M               ELAE----------------RGRRVTLVCGGRLGPSLSNRGRRSVARQLG
MUL_4658|M.ulcerans_Agy99           ELAE----------------RGRRVTLVCGGRLGPSLSNRGRRSVARQLG
MAV_1130|M.avium_104                ELAE----------------LGRPVTLICGPVLGPSLSPRGRRSVAKRLR
Mflv_1928|M.gilvum_PYR-GCK          EFAE----------------AGRDVTLVS-PVVGPSLSGPGRRSVTRRLR
Mvan_5348|M.vanbaalenii_PYR-1       ELAE----------------AGRNVTLVCGGGLLPTFSAAGRRSAARWLR
MLBr_02061|M.leprae_Br4923          QIAELADHTLKGAFRRIDSTKARVVLLDAAPAVLPPMGEKLGQRAAARLQ
                                    ::.                   * * :     : . :.          : 

Mb1842c|M.bovis_AF2122/97           DNGVETRTGVSVAAVSPGGVTLSSG----ERLAAATVVWCAGMRAS----
Rv1812c|M.tuberculosis_H37Rv        DNGVETRTGVSVAAVSPGGVTLSSG----ERLAAATVVWCAGMRAS----
MAB_4199|M.abscessus_ATCC_1997      RRRVDVLENTSVTEVRPDSVVLADG----TALSSAITVWAGGFGVP----
TH_1143|M.thermoresistible__bu      AHHVAVLEDDSVVEVRPDAVVFADG----AVRPSAVTVWAGGFGVP----
MSMEG_6818|M.smegmatis_MC2_155      ENGVGLLEDAMVTEVRPDAVVLDDG----TVWRSDLTIWAGGFGVP----
MMAR_4486|M.marinum_M               KLGVNVLESAAVSEVRWNAVVLADD----TVLASAATVWTAGFGVP----
MUL_4658|M.ulcerans_Agy99           KLGVNVLESAAVSEVRWNAVVLADD----TVLASAATVWTAGFGVP----
MAV_1130|M.avium_104                RLGVGVLESVTVTEVRWNEVVLSDG----VVLPSAATVWTAGFSVP----
Mflv_1928|M.gilvum_PYR-GCK          KLGV-HLVSASVRAVGADHVVLDDA----RSLPSAVTVWTAGFGVP----
Mvan_5348|M.vanbaalenii_PYR-1       RHGVAVLESDTVAEVRAGAVVFADG----AVRPSALTVWTTGFGVP----
MLBr_02061|M.leprae_Br4923          KMGVEIQLSAMVTDVDRNGITVQDSDGTVRRIESACKVWSAGVSASRLGR
                                       *    .  *  *  . :.. .         :   :*  *. ..    

Mb1842c|M.bovis_AF2122/97           RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMS
Rv1812c|M.tuberculosis_H37Rv        RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMS
MAB_4199|M.abscessus_ATCC_1997      ALAAHSGLSVDADGRLLTDDTLTSMDDGRIIGAGDAVTT---TSLPTRMS
TH_1143|M.thermoresistible__bu      QLAAASGLSTDALGRLRTDDTLTSVDDDRIVGAGDAVTS---SATPLRMS
MSMEG_6818|M.smegmatis_MC2_155      DLASRSGLRTDTLGRLITDATLTSIDDDRVLAAGDAAAP---SGKALRMA
MMAR_4486|M.marinum_M               DLAARSGLRTDDLGRLLTDETLTSVSDDRIVAAGDAVAP---SGQPLRMS
MUL_4658|M.ulcerans_Agy99           DLAARSGLRTDDLGRLLTDETLTSVSDDRIVAAGDAVAP---SGQPLRMS
MAV_1130|M.avium_104                DLAARSGLRTDPLGRLLTDETLTSIDDDRIVAAGDAAAP---SGRPLRMS
Mflv_1928|M.gilvum_PYR-GCK          TLAADSGLATDPLGRLLTDETLTSVDDDRIVAAGDSAAP---SGLPYRMS
Mvan_5348|M.vanbaalenii_PYR-1       DLAAVSGLATDDIGRLLTDETLTSVDDPRIVAAGDCAAP---SGAPLRMC
MLBr_02061|M.leprae_Br4923          DLAEQSLVELDWAGRVKVLPDLSIPGYRNVFVVGDMAAID--GVPGVAQG
                                     *:    :  *  **: .   *   .   :. .** .:            

Mb1842c|M.bovis_AF2122/97           CQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEG--
Rv1812c|M.tuberculosis_H37Rv        CQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEG--
MAB_4199|M.abscessus_ATCC_1997      CYTANTTGAAAADTVLSRLADTEPAPFRLAYVGQCLSLGRRNAVLQFTRK
TH_1143|M.thermoresistible__bu      CYAAAPTAATAADTVLSRLDGAEPAPFALAYVGSTVGLGRRAAVAQFTRA
MSMEG_6818|M.smegmatis_MC2_155      CYTAGPMAATAADTILSRIAGTPPEAFSLGYLGSCLGLGRRSAVMQFTRR
MMAR_4486|M.marinum_M               CQAAGPLGAQAANTVLSRIAGDQPVALNQAFVGQCISVGRSYGTIQLART
MUL_4658|M.ulcerans_Agy99           CQAAGPLGAQAANTVLSRIAGDQPVALNQAFVGQCISVGRSYGTIQLAHT
MAV_1130|M.avium_104                CQAAGPLGAQAANTVLGRIAGTEPAPLNQAFVGQCISLGRAAATFQLART
Mflv_1928|M.gilvum_PYR-GCK          CQAGLPLGAQAAETVLARIAGTDAAVATVPMSGQCISLGRDAGTVQLQRK
Mvan_5348|M.vanbaalenii_PYR-1       CASASQLGPQAANTVLSRIAGEQPSDFDYAFAGSCVSLGRRTGILQFARK
MLBr_02061|M.leprae_Br4923          AIQGAKYVANNIKAELGEANPAEREPFQYFDKGSMATVSRFSAVAKIGPL
                                    .  .           :                     :.   .       

Mb1842c|M.bovis_AF2122/97           ------------------------WERKVVSQGAPAKTTKQSINTRRIYP
Rv1812c|M.tuberculosis_H37Rv        ------------------------WERKVVSQGAPAKTTKQSINTRRIYP
MAB_4199|M.abscessus_ATCC_1997      DDS---------PVGAHARGRLTAWFKEFVLTGVPWGLRREGRKPGASVW
TH_1143|M.thermoresistible__bu      DDS---------PLRAHLRGRIPALIKDAVVKGTLWSIRREARKPGATIW
MSMEG_6818|M.smegmatis_MC2_155      DDT---------PLDVHLRGRVAGAVKELVLKGILWSLRREGRKPGATSW
MMAR_4486|M.marinum_M               DDT---------PVNVIIGGRAGAAVKETICKGTLWALRREAAKPGSYFW
MUL_4658|M.ulcerans_Agy99           DDT---------PVNVIIGGRAGAAVKEAICKGTLWALRREAAKPGSYFW
MAV_1130|M.avium_104                DDT---------PINAYLGGRAAAKLKEAICRGTLWAIRREAAKPGSYRW
Mflv_1928|M.gilvum_PYR-GCK          DDT---------PLNLYLGGRTGAFVKEQVCRFTITWLAAEARKPGSYRS
Mvan_5348|M.vanbaalenii_PYR-1       DDS---------PVSVYIGGRVGGSLKEAICKGTLWGLRRGARKPGSAIW
MLBr_02061|M.leprae_Br4923          EFSGFIAWLMWLVLHLMYLIGFKTKITTLLSWTVTFLSTRRGQLTITEQQ
                                                                 :           .  .     

Mb1842c|M.bovis_AF2122/97           PLNGSRADLLAAAAPRVQPRP----------
Rv1812c|M.tuberculosis_H37Rv        PLNGSRADLLAAAAPRVQPRP----------
MAB_4199|M.abscessus_ATCC_1997      FKSRPRPAEAAQHRAEVVQS-----------
TH_1143|M.thermoresistible__bu      YRGRRSAAPAPVPEPETVR------------
MSMEG_6818|M.smegmatis_MC2_155      LKNGDTVTSPALVDAKGSGHDGPIG------
MMAR_4486|M.marinum_M               LKGGSRPVQPSAEQPVVLS------------
MUL_4658|M.ulcerans_Agy99           LKGGSRPVQPSAEQPVVLP------------
MAV_1130|M.avium_104                LKGGQR--VPADERVGV--------------
Mflv_1928|M.gilvum_PYR-GCK          LKGPDRSELIASTAVPVR-------------
Mvan_5348|M.vanbaalenii_PYR-1       FKGGPRPGQPAVRPRAVTQS-----------
MLBr_02061|M.leprae_Br4923          AFARTRLEQLAELTAESQSTAAANRATMRAS
                                              .