For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TAVSVPRAGVPRVDIAAMLLDRVGDSHLGLRTRDRDWTWDQVVDESAARGALARKLRADGPFHIGVLLDN VPDFVFWLGGAALAGATIVGINPTRGPAEMAAEIRHTDCQLIVTDTAHLGRLQSLELGLSADRLLVIDSP EYLQRIAESRCTAQASEGVGADSLLLLLFTSGTTGASKAVKCSQGRLAQIAHLATEKFGHVRSDVDYCCM PLFHGNALMALWAPALANGATVCLTPTFSASRFLPDVRYFGATFFTYVGKALGYLLATPERADDADNQLA RGFGTEASPEDQAQFRRRFGAELFEGYGSSEGGGAVVLDPAAPPGALGRPAHEGVVVVDPETLQDCAAAV FDQHGRVLNADAAVGEIVDKQGRRGFEGYYNNDDADADRIRNGWYWTGDLGYLDAAGFIYFAGRRGDWIR VDGENMSALTVERVLRRHPLVIAAGVYAVPDPRSGDQVMASIEVAEPDSFDVDGFTQYLSAQEELGSKGI PRFLRISANLPVTGSNKVLKRELQEQRWHTDEPVFRWVGRGGPVFLRMSSDDKTALDAQFAVYGRQRLL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3628c | - | - | 100% (560) | acyl-CoA synthetase |
M. abscessus ATCC 19977 | MAB_4160 | - | e-106 | 41.21% (512) | acyl-CoA synthetase |
M. abscessus ATCC 19977 | MAB_2609 | - | e-104 | 42.12% (501) | acyl-CoA synthetase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1779c | fadD1 | 1e-119 | 43.88% (515) | acyl-CoA synthetase |
M. gilvum PYR-GCK | Mflv_1548 | - | 0.0 | 72.53% (546) | acyl-CoA synthetase |
M. tuberculosis H37Rv | Rv1750c | fadD1 | 1e-119 | 43.88% (515) | acyl-CoA synthetase |
M. leprae Br4923 | MLBr_02661 | - | 4e-23 | 25.00% (504) | acyl-CoA synthetase |
M. marinum M | MMAR_2625 | fadD1 | 1e-111 | 40.94% (530) | fatty-acid-CoA ligase FadD1 |
M. avium 104 | MAV_5257 | - | 1e-112 | 42.15% (503) | acyl-CoA synthetase |
M. smegmatis MC2 155 | MSMEG_4952 | - | 1e-108 | 42.05% (497) | acyl-CoA synthetase |
M. thermoresistible (build 8) | TH_4470 | - | 1e-103 | 40.34% (528) | PUTATIVE AMP-dependent synthetase and ligase |
M. ulcerans Agy99 | MUL_4069 | fadD17 | 1e-107 | 42.64% (516) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_5209 | - | 0.0 | 72.84% (545) | acyl-CoA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1548|M.gilvum_PYR-GCK -------MTDLRRTDVATMLLDRAGDQHLGVLTRERDWTWDQVVRESAAR Mvan_5209|M.vanbaalenii_PYR-1 --------MTARRDDVAAMLLDRTGDRRPGLRTRERDWTWDEVVHESAVR MAB_3628c|M.abscessus_ATCC_199 MTAVSVPRAGVPRVDIAAMLLDRVGDSHLGLRTRDRDWTWDQVVDESAAR Mb1779c|M.bovis_AF2122/97 -----------MTDTIQSLLRQHVSDPTIAVKYGGLQWTWSQYLAESAAR Rv1750c|M.tuberculosis_H37Rv -----------MTDTIQSLLRQHVSDPTIAVKYGGLQWTWSQYLAESAAR MMAR_2625|M.marinum_M -----------MTETIQALLQQRMSDSSIAVKYHDLQWTWREYLAEAAAR MAV_5257|M.avium_104 ----------MAEDTIQALLRKRWSDPGVAVKYGDTQWSWAQYLRDAAAR MSMEG_4952|M.smegmatis_MC2_155 -----------MADTLQQLLRSRAEQDTVAVKYGDRTWTWREHIAEAAAQ TH_4470|M.thermoresistible__bu -----------MADTLQQLLRERAAQDTIAIKYDDRRITWREHVADAARQ MUL_4069|M.ulcerans_Agy99 ---------MSADPTVPQLLVPLAEIGDRGIYFEDSFTSWADHIGHGAAI MLBr_02661|M.leprae_Br4923 MKSESITSSRAPVEQIDARLTGQFESPSIASLVEAAAIRNPSAPALVVTD : * . . . Mflv_1548|M.gilvum_PYR-GCK ASLATRLLDGV------PGPFHVGILLAN---------VPDFVFWLGGAA Mvan_5209|M.vanbaalenii_PYR-1 ASIASTLSD--------LDPPHIGVLLDN---------VPDFVFWLGGAA MAB_3628c|M.abscessus_ATCC_199 GALARKLRAD--------GPFHIGVLLDN---------VPDFVFWLGGAA Mb1779c|M.bovis_AF2122/97 AAALITIADP-------QRPTHIGSLLGN---------TPEMLAQLAAAG Rv1750c|M.tuberculosis_H37Rv AAALITIADP-------QRPTHIGSLLGN---------TPEMLAQLAAAG MMAR_2625|M.marinum_M AAGLIAAADP-------DRPLHIGSLLGN---------TPEMLAQMAAAG MAV_5257|M.avium_104 AAALLGAADP-------GRPMHVGTLLGN---------TPEMLSQMAAAG MSMEG_4952|M.smegmatis_MC2_155 ARFLISRADH-------GRPLHVGVLLGN---------TPQMLTALAAAA TH_4470|M.thermoresistible__bu AAALLAAADP-------NRPPHIAVLLGN---------TPDMLTALAGAA MUL_4069|M.ulcerans_Agy99 AAALRERLDP-------TRPPHVGVLLRN---------TPFFSAMLTAAG MLBr_02661|M.leprae_Br4923 NRIVVSYRDLLRLVDDLTVQLALGGLLPGDRVALCAASNIEFVVGLLAAS :. ** . : : .*. Mflv_1548|M.gilvum_PYR-GCK LAGATVVGLNPTRGTADLAADIRHADCRLIVTDSVGAQ--------RLRG Mvan_5209|M.vanbaalenii_PYR-1 LAGATIVGLNPTRGAADLAADIRHADCRLIVTDAAGAD--------RLRG MAB_3628c|M.abscessus_ATCC_199 LAGATIVGINPTRGPAEMAAEIRHTDCQLIVTDTAHLG--------RLQS Mb1779c|M.bovis_AF2122/97 LGGYVLCGLNTTRRGDALAADVRRADCQIVVTDADHRA--------LLDG Rv1750c|M.tuberculosis_H37Rv LGGYVLCGLNTTRRGDALAADVRRADCQIVVTDADHRA--------LLDG MMAR_2625|M.marinum_M LGGYVLCGLNTTRRGEALAADIRRAECQIIVTDAENRS--------LLDG MAV_5257|M.avium_104 LGGYVLCGLNTTRRGKALAADVRRADCQFVVTDAEHRP--------LLDG MSMEG_4952|M.smegmatis_MC2_155 LGGYVLCGINTTRRGEGLARDIARVDCQLLITDAEHRG--------LIDG TH_4470|M.thermoresistible__bu LGGYVLCGINTTRRGAALARDVERVDAQILITDAEHRH--------LLDG MUL_4069|M.ulcerans_Agy99 MSGIIPVGLNPVRRGAALARDIEHADCQMVLADTASAS--------TLDG MLBr_02661|M.leprae_Br4923 RAGLIVVPLDPALPVNEQCIRSQAAGVRVTLVDSLALEGVSDQRAATMRY .* ::.. . . :. :.*: : Mflv_1548|M.gilvum_PYR-GCK IGHGVPDDRVLVVDDPEYRRALEACATEPAVAAGVG--ASSLFLLLFTSG Mvan_5209|M.vanbaalenii_PYR-1 LDHGVPPDHLLRVDSPDHAQLLDAHRVEPVAAPGVG--AKSLFLLLFTSG MAB_3628c|M.abscessus_ATCC_199 LELGLSADRLLVIDSPEYLQRIAESRCTAQASEGVG--ADSLLLLLFTSG Mb1779c|M.bovis_AF2122/97 LDLAGA--RILDTSTPRWAELVAGDG-AFVPYREVD--TMDPFMMIFTSG Rv1750c|M.tuberculosis_H37Rv LDLAGA--RILDTSTPRWAELVAGDG-AFVPYREVD--TMDPFMMIFTSG MMAR_2625|M.marinum_M LDLADV--EIFDTSTPRWAELVGGAG-SLVPHRKVE--MMDPFMMIFTSG MAV_5257|M.avium_104 LDLAGT--QILDTSTPDWAGFVDAAG-ELTPHREVA--AMDPFMMIFTSG MSMEG_4952|M.smegmatis_MC2_155 LELPGV--TVLDAS-----DICPEAG-ELTPYREAG--PDDTFMMIFTSG TH_4470|M.thermoresistible__bu LELPGV--TVFDTSTTEWARLLAAAP-ELTPHREVT--PDDTFMMIFTSG MUL_4069|M.ulcerans_Agy99 IEH-------VNVDSAEWAEVIDAHRNSEISFQNAA--PADLFMLIYTSG MLBr_02661|M.leprae_Br4923 WPIAVSYGSVTGASEGSLLVHLDDTAALHPVTSTPDGLRHDDAMIMFTGG . . ::::*.* Mflv_1548|M.gilvum_PYR-GCK TTGASKAVKCSQGRLARIAYVATEKFGHHRGDVDYCCMPLFHGNALMALW Mvan_5209|M.vanbaalenii_PYR-1 TTGTSKAVRCSQGRLARIAYAATDKFGHHRDDVDYCCMPLFHGNAIMALW MAB_3628c|M.abscessus_ATCC_199 TTGASKAVKCSQGRLAQIAHLATEKFGHVRSDVDYCCMPLFHGNALMALW Mb1779c|M.bovis_AF2122/97 TSGNPKAVPVSHLMATFAGRSLTERFGLTEQDTCYVSMPLFHSNAVVAGW Rv1750c|M.tuberculosis_H37Rv TSGNPKAVPVSHLMATFAGRSLTERFGLTEQDTCYVSMPLFHSNAVVAGW MMAR_2625|M.marinum_M TSGNPKAVQVSHLMPTFAGRSLTERFGLSAHDTCYVSMPLFHSNAVVAGW MAV_5257|M.avium_104 TSGNPKAVQVSHLMAVFAGSNLVQRFGLTEHDTCYVSMPLFHSNAVVAGW MSMEG_4952|M.smegmatis_MC2_155 TSGDPKAVEVPHAMVLFAGSALVERYGLTCEDVCYLAMPLFHSNAVYAGW TH_4470|M.thermoresistible__bu TSGEPKAVQVPHSTVLFSGTALVDRYQLGSADTCYLAMPLFHSNAVYAGW MUL_4069|M.ulcerans_Agy99 TSGDPKAVKCGHSKVAIAGVTMTQRFGLGRDDVCYVSMPLFHSNAVLVGW MLBr_02661|M.leprae_Br4923 TTGLPKMVPWTDGNIAGSVHAIITAYQLGPQDATVVVMPLYHGHGLIAAL *:* .* * . : *. ***:*.:.: . Mflv_1548|M.gilvum_PYR-GCK APALANG--ATVCLTPSFSASRFLSDIRYFGATFFTYVGKALAYLMATPE Mvan_5209|M.vanbaalenii_PYR-1 APALANG--ATVCLTPTFSASRFLPDVRYFGATFFTYVGKALGYLMATPE MAB_3628c|M.abscessus_ATCC_199 APALANG--ATVCLTPTFSASRFLPDVRYFGATFFTYVGKALGYLLATPE Mb1779c|M.bovis_AF2122/97 APAVVSG--AAIAP-ATFSATGFLDDVRRYHATYMNYVGKPLAYILATPE Rv1750c|M.tuberculosis_H37Rv APAVVSG--AAIAP-ATFSATGFLDDVRRYHATYMNYVGKPLAYILATPE MMAR_2625|M.marinum_M APAVVSG--AAIAP-AKFSATGFLDDIRRYQATYMNYVGKPLAYILATPE MAV_5257|M.avium_104 APAVCSG--AAIVP-AKFSARNFLDDIRRYGATYMNYVGKPLAYVLATPE MSMEG_4952|M.smegmatis_MC2_155 SVAVGAG--AAMAP-ATFSASGFLPDIRRYGATYMNYVGKPLAYILATPE TH_4470|M.thermoresistible__bu SVAVGAG--AAMAP-ATFSASRFLHDIRRYGATYMNYVGKPLAYILATPE MUL_4069|M.ulcerans_Agy99 AVAVACQ--GSMALRRKFSASQFLSDVRRYGATYANYVGKPLSYVLATPE MLBr_02661|M.leprae_Br4923 LSTLASGGVVLLPARARFSARTFWDDIDAVAATWYTAAPAIHRILLELAS :: : *** * *: **: . . :: .. Mflv_1548|M.gilvum_PYR-GCK ----QADDSDNTLTRGFGTEASPEDQAEFRRRFGAELHEGYGSSEGGAVA Mvan_5209|M.vanbaalenii_PYR-1 ----APDDADNTLQRGFGTEASPEDQKEFRRRFAAELFEGYGSSEGGAVA MAB_3628c|M.abscessus_ATCC_199 ----RADDADNQLARGFGTEASPEDQAQFRRRFGAELFEGYGSSEGGGAV Mb1779c|M.bovis_AF2122/97 ----RDDDADNPLRVAFGNEANDKDIEEFSRRFGVQVEDGFGSTENAVIV Rv1750c|M.tuberculosis_H37Rv ----RDDDADNPLRVAFGNEANDKDIEEFSRRFGVQVEDGFGSTENAVIV MMAR_2625|M.marinum_M ----RDDDDENPLRVAFGNEANEKDIEEFSRRFAVQVEDGFGSTENAVIV MAV_5257|M.avium_104 ----RADDADNPLRVAFGNEANDKDIEEFGRRFGVQVEDGFGSTENAVIV MSMEG_4952|M.smegmatis_MC2_155 ----KPDDHDNPLRIAFGNEAADRDIAAFSRRFGCTVWDGFGSTETAVII TH_4470|M.thermoresistible__bu ----KPDDHDNPLRIAFGNEATDRDIEAFSRRFGCTVWDGFGSTEIAVII MUL_4069|M.ulcerans_Agy99 ----RPDDADNPLRAVYGNEGVPGDIERFGCRFGCVVQDGFGSTEGGVAI MLBr_02661|M.leprae_Br4923 TQSFRSKRAKLRFIRSCSAPLTQETAQALREEFLAPVICAFGMTEATHQV . . : . : .* : .:* :* Mflv_1548|M.gilvum_PYR-GCK TPDPAAPATALGRPAHEDVVVVDPATLKPCAPAVLDPRGRVTNADDAIGE Mvan_5209|M.vanbaalenii_PYR-1 TPDPAAPPAALGRPAHDDVVVVHPETLCLCPTAVLDASGRVLNPDEAVGE MAB_3628c|M.abscessus_ATCC_199 VLDPAAPPGALGRPAHEGVVVVDPETLQDCAAAVFDQHGRVLNADAAVGE Mb1779c|M.bovis_AF2122/97 IREPGTPPGSIG-RGAHGVAVYNGETVTECAVARFDAHGALTNADEAIGE Rv1750c|M.tuberculosis_H37Rv IREPGTPPGSIG-RGAHGVAVYNGETVTECAVARFDAHGALTNADEAIGE MMAR_2625|M.marinum_M IREPGTPPGSIG-KGVDGVAVYNSDSVTECAVARFDEHGALANADEAVGE MAV_5257|M.avium_104 IREPGTPRGSIG-RGIDGVAIYNSDTVTECPVARFDADGALINADEAVGE MSMEG_4952|M.smegmatis_MC2_155 TRPDDCPPGSIG-KGFPGVAIYDPQTVTECAVAEFDATGALANPDAAIGE TH_4470|M.thermoresistible__bu TRPDDCPPGSVG-KGFPGVAIYNPETLQECSVARFDANGALINPDEAIGE MUL_4069|M.ulcerans_Agy99 ARTPDTPAGSLG-PLPENIEIVDPETGQQCPVG-------------AVGE MLBr_02661|M.leprae_Br4923 TTTNIKWFGQGENPTVTNGLVGQSTGVQIRIVG----SDGQPLPPDTVGE . : . . ::** Mflv_1548|M.gilvum_PYR-GCK IVDRRGARDFEGYYRNDAADADRVRNGWYWSGDLGYVDRDGFLYFAGRRG Mvan_5209|M.vanbaalenii_PYR-1 IVDRRGAADFEGYYRNDAADAERVRNGWYWSGDLGYLDGAGFLYFAGRRG MAB_3628c|M.abscessus_ATCC_199 IVDKQGRRGFEGYYNNDDADADRIRNGWYWTGDLGYLDAAGFIYFAGRRG Mb1779c|M.bovis_AF2122/97 LVNTTGSGFFTGYYNDPEANAERMRHGMYWSGDLAYRDSEGWIYLAGRTA Rv1750c|M.tuberculosis_H37Rv LVNTTGSGFFTGYYNDPEANAERMRHGMYWSGDLAYRDSEGWIYLAGRTA MMAR_2625|M.marinum_M LVNTMGSGFFTGYYNDPGANAERMRHGMYWSGDLAYRDSQGWIYLAGRTA MAV_5257|M.avium_104 LVNTAGSGFFTGYYNDPDANAERMRHGMYWSGDLAYRDADGWIYLAGRTA MSMEG_4952|M.smegmatis_MC2_155 LVNTAGGGLFRGYYNDQGATDQRMRHGMYWSGDLAYRDADGWIYLAGRTA TH_4470|M.thermoresistible__bu LVNTAGAGLFRGYYNDPQATDERMRHGMYWSGDLAYRDADGWIYLAGRTA MUL_4069|M.ulcerans_Agy99 LVNTAGPGRFEGYYNDEAASAQRMSGGVYHSGDLAYRDAAGYAYFAGRLG MLBr_02661|M.leprae_Br4923 VWLR-GSTVVRGYLGDPAITAANFTHGWLRTGDLGSLSVTGDLRIRGRIK : * . ** : .. * :***. . * : ** Mflv_1548|M.gilvum_PYR-GCK DWIRVDGENTSALTIERVLRRHPEVIAAAVYGVPDPRSGDQVMAAVEVAE Mvan_5209|M.vanbaalenii_PYR-1 DWLRVDGENISTLTIERVLRRHAGVIAAAVYGVPDPRSGDQMMAAVEVAD MAB_3628c|M.abscessus_ATCC_199 DWIRVDGENMSALTVERVLRRHPLVIAAGVYAVPDPRSGDQVMASIEVAE Mb1779c|M.bovis_AF2122/97 DWMRVDGENLTAAPIERILLRYKAINRVAVYAVPDEYVGDQVMAALVLRA Rv1750c|M.tuberculosis_H37Rv DWMRVDGENLTAAPIERILLRYKAINRVAVYAVPDEYVGDQVMAALVLRA MMAR_2625|M.marinum_M DWMRVDGENLAAAPIERILLRDNSVNRVAVYAVPDARVGDQVMAAVVPHR MAV_5257|M.avium_104 DWMRVDGENLAAAPIERILLRHTAINRVAVYAVPDGHVGDQVMAAVVLND MSMEG_4952|M.smegmatis_MC2_155 DWMRVDGENLTAAPIERILLRLDAVNRVAVYPVPDEYVGDQVMAAIVLQD TH_4470|M.thermoresistible__bu DWMRVDGENLTAAPIERILLRLPAINRAAVYPVPDELVGDQVMAAVVLQD MUL_4069|M.ulcerans_Agy99 DWMRVDGENLGTAPIERVLLRYPDAIEVAVYAIPDPVVGDQVMAAMVLTP MLBr_02661|M.leprae_Br4923 ELINRSGEKISPERVEGVLASHHNVMEVAVFGDPDKVYGETVTAVIVPRE : :. .**: . :* :* ..*: ** *: : * : Mflv_1548|M.gilvum_PYR-GCK PGSFDINAFVDFLVGQDDLGAKGFPRLLRVSARLPATGSNKVLKRELQTQ Mvan_5209|M.vanbaalenii_PYR-1 PGSFDVDAFASFLVAQDDLGRKGFPRLLRISAKLPATGSNKVLKRDLQAQ MAB_3628c|M.abscessus_ATCC_199 PDSFDVDGFTQYLSAQEELGSKGIPRFLRISANLPVTGSNKVLKRELQEQ Mb1779c|M.bovis_AF2122/97 GDTFDPDAFEAFLDAQPDLSTKARPRYIRIAADLPSTATHKVLKRQLIDE Rv1750c|M.tuberculosis_H37Rv GDTFDPDAFEAFLDAQPDLSTKARPRYIRIAADLPSTATHKVLKRQLIDE MMAR_2625|M.marinum_M DQRFTPESLEAFLRAQPDLSAKAWPRYVRIAADLPSTATHKVLKRQLVAE MAV_5257|M.avium_104 GETLTPAAFEVFLDAQPDLSPKARPRYVRIAADLPSTATHKVLKRQLISQ MSMEG_4952|M.smegmatis_MC2_155 GATLTPGEFEEFLAAQRDLSPKAWPRYVWIAEDLPTTATNKILKRELVAT TH_4470|M.thermoresistible__bu --ELTPRQFADFLAAQTDLSPKAWPRYVWVADDLPVTATNKVLKRELIAR MUL_4069|M.ulcerans_Agy99 GAKFDVDKFRAFLAGQSDLGPKQWPSYVRICSALPRTETFKVLKRQLAAD MLBr_02661|M.leprae_Br4923 VIAPTPSELAVFCRDR--LAAFEVPTRFQEASALPHTAKGSLDRRAVAEQ : : : *. * . . ** * . .: :* : Mflv_1548|M.gilvum_PYR-GCK RWHTDEAVYRWSGRGRPRYRLMTADDRAALDEEFVTHGRAHHGTT Mvan_5209|M.vanbaalenii_PYR-1 RWHTDDAVHRWVGRGHPRYRLMTDADRGALDAEFTVHGREHHVAE MAB_3628c|M.abscessus_ATCC_199 RWHTDEPVFRWVGRGGPVFLRMSSDDKTALDAQFAVYGRQRLL-- Mb1779c|M.bovis_AF2122/97 GTAVGKADTLWVREPRGSAYHHASGPAKAI--------------- Rv1750c|M.tuberculosis_H37Rv GTAVGKADTLWVREPRGSAYHHASGPAKAI--------------- MMAR_2625|M.marinum_M GTAIGPDEALWVREQRGTRYRIASDESR----------------- MAV_5257|M.avium_104 GTAVAAGEVLWEREPRGTAYTVVASPDCGVPGDGSAPSTVAPV-- MSMEG_4952|M.smegmatis_MC2_155 GTDPA-GRVLWHRD--GTRFTDLSAASAPGAAPGISPA------- TH_4470|M.thermoresistible__bu GTAPD-GRVLWRRD--GAQYHVYAESDE----------------- MUL_4069|M.ulcerans_Agy99 GVDCG--DPVWPIRDQS---------------------------- MLBr_02661|M.leprae_Br4923 FAHRG----------------------------------------