For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPRVSEDHLAARRRQILDGARRCFAEYGYDGATVRRLEHTIGMSRGAIFHHFRDKDTLFFALAREDAERM ANVASREGLVQVMRDMLADPSQFDWLATRLEIARKLRNDPEFRRGWNQRSEELNTATLARLQRQKKAGRL REDVPSEVILGYLDLVLDGLVARLAAGESTESLSRVLDLVEDSVRRADHA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2731 | - | - | 100% (190) | TetR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_2543c | - | 2e-09 | 23.86% (176) | TetR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_2392 | - | 3e-09 | 36.78% (87) | putative transcriptional regulator, TetR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1510c | - | 5e-81 | 79.14% (187) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_3666 | - | 1e-80 | 78.49% (186) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv1474c | - | 5e-81 | 79.14% (187) | transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_01070 | - | 9e-06 | 22.94% (170) | putative TetR-family transcriptional regulator |
| M. marinum M | MMAR_2281 | - | 4e-82 | 80.21% (187) | transcriptional regulatory protein |
| M. avium 104 | MAV_3305 | - | 3e-79 | 77.66% (188) | HTH-type transcriptional repressor AcnR |
| M. smegmatis MC2 155 | MSMEG_3142 | - | 7e-81 | 77.96% (186) | HTH-type transcriptional repressor AcnR |
| M. thermoresistible (build 8) | TH_0251 | - | 3e-78 | 77.47% (182) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| M. ulcerans Agy99 | MUL_1483 | - | 3e-82 | 80.21% (187) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_2744 | - | 5e-81 | 78.49% (186) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1510c|M.bovis_AF2122/97 -----------------MPKVSEDHLAARRRQILDGARRCFAEYGYDKAT
Rv1474c|M.tuberculosis_H37Rv -----------------MPKVSEDHLAARRRQILDGARRCFAEYGYDKAT
MMAR_2281|M.marinum_M -----------------MPKVSEDHLAARRRQILDGARRCFAEYGYDKAT
MUL_1483|M.ulcerans_Agy99 -----------------MPKVSEDHLAARRRQILDGARRCFAEYGYDKAT
MAV_3305|M.avium_104 -----------------MPKVSEDHLAARRRQILDGARRCFAEFGYDKAT
Mflv_3666|M.gilvum_PYR-GCK -----------------MPRVTDDHLAARRRQILDGARRCFAEYGYESAT
Mvan_2744|M.vanbaalenii_PYR-1 -----------------MPRVTDDHLAARRRQILDGARRCFAEYGYDRAT
MSMEG_3142|M.smegmatis_MC2_155 -----------------MPRVTDDHLAARRRQILDGARRCFAKYGYESAT
TH_0251|M.thermoresistible__bu --------------------VTDDHLAARRRQILDGARRCFAEYGYEQAT
MAB_2731|M.abscessus_ATCC_1997 -----------------MPRVSEDHLAARRRQILDGARRCFAEYGYDGAT
MLBr_01070|M.leprae_Br4923 MIVVGNFTQSNYVPASRGRRSSQLSGDDREQAILAVAERLLAERPLGDFS
:: *.: ** *.* :*: :
Mb1510c|M.bovis_AF2122/97 VRRLEQAIGMSRGAIFHHFRDKDALFFALAREDTER----MAAVASREGL
Rv1474c|M.tuberculosis_H37Rv VRRLEQAIGMSRGAIFHHFRDKDALFFALAREDTER----MAAVASREGL
MMAR_2281|M.marinum_M VRRLEQAIGMSRGAIFHHFRDKDALFFALAHEDAER----MADVASREGL
MUL_1483|M.ulcerans_Agy99 VRRLEQAIGMSRGAIFHHFRDKDALFFALAHEDAER----MADVASREGL
MAV_3305|M.avium_104 VRRLEQAIGMSRGAIFHHFRDKDALFFALAHEDAER----MAEVASRAGL
Mflv_3666|M.gilvum_PYR-GCK VRRLEQTIGLSRGAIFHHFRDKDTLFFELAREDAER----MADVAAREGL
Mvan_2744|M.vanbaalenii_PYR-1 VRRLEQTIGLSRGAIFHHFRDKDTLFFELAREDAER----MADVAAREGL
MSMEG_3142|M.smegmatis_MC2_155 VRRLEETIGLSRGAIFHHFKDKDTLFFELAREDAER----MAEVAAREGL
TH_0251|M.thermoresistible__bu VRRLEQATGLSRGAIFHHFKDKDTLFFELAREDAER----MAEVASREGL
MAB_2731|M.abscessus_ATCC_1997 VRRLEHTIGMSRGAIFHHFRDKDTLFFALAREDAER----MANVASREGL
MLBr_01070|M.leprae_Br4923 VDELAKGAGISRPTFYFYFPSKNAVLLSLLDDLNMKSRSAVEALAEQLPA
* .* . *:** :::.:* .*::::: * : : : :* :
Mb1510c|M.bovis_AF2122/97 IGVMRDMLAAPDQFDWLATRLEIARK----LRNDPDFSRGWAERSAELAA
Rv1474c|M.tuberculosis_H37Rv IGVMRDMLAAPDQFDWLATRLEIARK----LRNDPDFSRGWAERSAELAA
MMAR_2281|M.marinum_M IQVMRDMLAAPDQFDWLATRLEIARK----LRNDPEFSRGWAERSAELAA
MUL_1483|M.ulcerans_Agy99 IQVMRDMLAAPEQFDWLATRLEIARK----LRNDPEFSRGWAERSAELAA
MAV_3305|M.avium_104 IQVMRDMLAAPDQFDWLATRLEIARK----LRNDPAFSRGWAERSAELAA
Mflv_3666|M.gilvum_PYR-GCK IQVMRDMLAAPDQFDWLATRLEIARK----LRNDPAFSQGWAERSAELSA
Mvan_2744|M.vanbaalenii_PYR-1 IQVMRDMLAAPDQFNWLATRLEIARK----LRNDPAFSRGWAERSAELSA
MSMEG_3142|M.smegmatis_MC2_155 IQVMRDLLAAPEQYDWLATRLEIARK----LRNDPDFHRGWAERSAELTA
TH_0251|M.thermoresistible__bu IQVMRDLIAAPEQYDWLTTRLEIARK----LRNDPEFHRGWSELSAELAA
MAB_2731|M.abscessus_ATCC_1997 VQVMRDMLADPSQFDWLATRLEIARK----LRNDPEFRRGWNQRSEELNT
MLBr_01070|M.leprae_Br4923 DPAAVWRSAITAFFEVCGTHRAVAVAGAAAKATSPEVRRLWSTVMQQWID
. * . :: *: :* ..* . : * :
Mb1510c|M.bovis_AF2122/97 ATTDRLRRQKQANRVRDDVPSDVLRCYLDLVLDGLLARLASGE-----DP
Rv1474c|M.tuberculosis_H37Rv ATTDRLRRQKQANRVRDDVPSDVLRCYLDLVLDGLLARLASGE-----DP
MMAR_2281|M.marinum_M ATTDRLRRQKQANRVRDDVPNEVLQCYLDLVLDGLVARLASGE-----DP
MUL_1483|M.ulcerans_Agy99 ATTDRLRRQKQANRVRDDVPNEVLQCYLDLVLDGLVARLASGE-----DP
MAV_3305|M.avium_104 ATTDRLRRQTEAHRVRDDVPGDVLQCYLELVLDGLVARLASGE-----DP
Mflv_3666|M.gilvum_PYR-GCK ATTERLRRQKQAGRLRDDVDGEVLRTYLELVLDGLVARLASGD-----DP
Mvan_2744|M.vanbaalenii_PYR-1 ATTERLRRQKRAGRLRDDVPGDVLRTYLELVLDGLVARLASGD-----DP
MSMEG_3142|M.smegmatis_MC2_155 ATTERLRRQKQAGRLRDDVPSAVLHIYLDVVLDGLVARLASGE-----DS
TH_0251|M.thermoresistible__bu ATTARLRRQKQAGRLRDDVPGEVLRTYLELVLDGLVARLASGD-----DP
MAB_2731|M.abscessus_ATCC_1997 ATLARLQRQKKAGRLREDVPSEVILGYLDLVLDGLVARLAAGE-----ST
MLBr_01070|M.leprae_Br4923 YNTAAIQAERKCGVAPDTIPAEDLAVALQLMTERVMAATFSDEKPLIPDK
. :: : .. : : : *::: : ::* :.: .
Mb1510c|M.bovis_AF2122/97 QRLAAVLDLVENSVRRS-----------------
Rv1474c|M.tuberculosis_H37Rv QRLAAVLDLVENSVRRS-----------------
MMAR_2281|M.marinum_M QRLTDVLDLVENSLRRS-----------------
MUL_1483|M.ulcerans_Agy99 QRLTDVLDLVENSLRRS-----------------
MAV_3305|M.avium_104 QRLSAVLDLVENSVRRNDSRPG------------
Mflv_3666|M.gilvum_PYR-GCK EKLSAVLDLVEASVRQP-----------------
Mvan_2744|M.vanbaalenii_PYR-1 EKLGAVLDLVEASVRQQ-----------------
MSMEG_3142|M.smegmatis_MC2_155 KNLSAVLDLVEASVRQQPKPAPAVSTDHSFSDES
TH_0251|M.thermoresistible__bu EKLSAVLDLVEASVRHQGSE--------------
MAB_2731|M.abscessus_ATCC_1997 ESLSRVLDLVEDSVRRADHA--------------
MLBr_01070|M.leprae_Br4923 KVIDTLVHIWLASIYGS-----------------
: : ::.: *: