For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PPVQLKLNNVGVHYGPIQAVNTLSFDVREGELVTLLGSNGAGKSTAMRAISGLVPLSSGTIFFEGQDISK MKAHRRVRAGIVQAPEGRGIFPGMTVAENLEMGCYGRKFKSRAERRERLDWINALFPRLAERRHQPGGTL SGGEQQMLSIGRALMARPKILLLDEPSMGLAPLLITKIFNIIEEINAAGTTVVLVEQNAQQALSRSDHAY ILETGSVVRSGAGRELLQDDSIRSAYLGVV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2622c | - | - | 100% (241) | branched chain amino acid ABC transporter |
M. abscessus ATCC 19977 | MAB_2623c | - | 1e-32 | 32.40% (250) | branched chain amino acid ABC transporter |
M. abscessus ATCC 19977 | MAB_4237c | - | 4e-26 | 30.00% (240) | amino acid ABC transporter ATP-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1493c | - | 9e-25 | 32.02% (228) | unidentified antibiotic-transport ATP-binding protein ABC |
M. gilvum PYR-GCK | Mflv_3570 | - | 2e-98 | 72.69% (238) | ABC transporter related |
M. tuberculosis H37Rv | Rv1458c | - | 1e-24 | 32.02% (228) | unidentified antibiotic-transport ATP-binding protein ABC |
M. leprae Br4923 | MLBr_00590 | - | 2e-24 | 30.84% (227) | putative ABC transporter ATP-binding protein |
M. marinum M | MMAR_2263 | - | 2e-23 | 30.53% (226) | antibiotic ABC transporter ATP-binding protein |
M. avium 104 | MAV_5181 | - | 2e-23 | 30.26% (228) | daunorubicin resistance ABC transporter ATPase subunit |
M. smegmatis MC2 155 | MSMEG_3251 | - | 4e-99 | 74.68% (237) | branched-chain amino acid ABC transporter ATP-binding protein |
M. thermoresistible (build 8) | TH_3858 | - | 2e-97 | 72.57% (237) | PUTATIVE ABC transporter related |
M. ulcerans Agy99 | MUL_1859 | - | 1e-23 | 30.80% (224) | antibiotic ABC transporter ATP-binding protein |
M. vanbaalenii PYR-1 | Mvan_2845 | - | 1e-100 | 73.95% (238) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1493c|M.bovis_AF2122/97 MNRAPDTP------EVVLRLRGVCKRYGSITAVSNLDLDVHDAEVMALLG Rv1458c|M.tuberculosis_H37Rv MNRAPDTP------EVVLRLRGVCKRYGSITAVSNLDLDVHDAEVMALLG MMAR_2263|M.marinum_M MSSDPKYPAAGRGTEIVVRLRGVGKQYGSVTAVSNLDLEVRAAEVMALLG MUL_1859|M.ulcerans_Agy99 ----------------MVRLRGVGKQYGSVTAVSNLDLEVRAAEVMALLG MLBr_00590|M.leprae_Br4923 MSSACTVPETP---EVVIRLRGVCKHYGSILAVSNLDLDIHSAEVLALLG MSMEG_3251|M.smegmatis_MC2_155 MTKS-----GETTRKVLLEVRDAVVHYGRIRALHGVSLVVHEGELVTLLG TH_3858|M.thermoresistible__bu ---------------VMLEVRDVEVHYGRIRALHGVSLRVHEGELVTLLG Mflv_3570|M.gilvum_PYR-GCK MTNS------PDPRPVLLEVRDAVVHYGRIKALHSVSLTVHEGELVTLLG Mvan_2845|M.vanbaalenii_PYR-1 MSSPETVAGQPDPRPVLLEVRDVVVHYGRIKALHSVSLTVHEGELVTLLG MAB_2622c|M.abscessus_ATCC_199 ------------MPPVQLKLNNVGVHYGPIQAVNTLSFDVREGELVTLLG MAV_5181|M.avium_104 ---------MTGPPPMAIDAKHLTYRYGQFTAVDDVTLQVRPGETMGLLG : . :** . *: : : :: .* : *** Mb1493c|M.bovis_AF2122/97 PNGAGKTTTVEMCEGFVRPDAGSIEVLGLDPITDNARLRARIGVMLQ--G Rv1458c|M.tuberculosis_H37Rv PNGAGKTTTVEMCEGFVRPDAGSIEVLGLDPITDNARLRARIGVMLQ--G MMAR_2263|M.marinum_M PNGAGKTTTVEMCEGFVRPDAGSIEVLGLDPIADNARLRPRIGVMLQ--G MUL_1859|M.ulcerans_Agy99 PNGAGKTTTVEMCEGFVRPDAGSIEVLGLDPIADNARLRPRIGVMLQ--G MLBr_00590|M.leprae_Br4923 PNGAGKTTTVEMCEGFVRPDAGTIEVLGLDPITDNARLRARIGVMLQ--G MSMEG_3251|M.smegmatis_MC2_155 SNGAGKTTMMRAISGLRPLTSGSVWFDGQDISRMKAHRRVTEGLIQAPEG TH_3858|M.thermoresistible__bu SNGAGKTTMMRAISGLRPLTRGSVWFDGRDITRVSAHRRVADGLIQVPEG Mflv_3570|M.gilvum_PYR-GCK SNGAGKTTMMRAISGLLPLTSGSVWFEGKDISRVKAHKRVTDGLIQAPEG Mvan_2845|M.vanbaalenii_PYR-1 SNGAGKTTMMRAISGLLPLSSGSVWFDGKDISRVKAHKRVADGLIQAPEG MAB_2622c|M.abscessus_ATCC_199 SNGAGKSTAMRAISGLVPLSSGTIFFEGQDISKMKAHRRVRAGIVQAPEG MAV_5181|M.avium_104 PNGAGKTTMVRMLTTLAPVQQGELHIFGLDARRRTTDIRANIGYVPQ--Q .*****:* :. : * : . * * .: * * : Mb1493c|M.bovis_AF2122/97 GGGYPAARAGEMLDL------VASYAANPLDPHWLLDTLG-LTEAARTTY Rv1458c|M.tuberculosis_H37Rv GGGYPAARAGEMLDL------VASYAANPLDPHWLLDTLG-LTEAARTTY MMAR_2263|M.marinum_M GGGYPAARAGEMLDL------VASYAADPLDPRWLLDTLG-LTDAARTTY MUL_1859|M.ulcerans_Agy99 GGGYPAARAGEMLDL------VASYAADPLDPRWLLDTLG-LTDAARTTY MLBr_00590|M.leprae_Br4923 GGGYPAARAGEMLNL------VASYAADPLDPEWLLETLG-LTDVARTTY MSMEG_3251|M.smegmatis_MC2_155 RGVFPGMTVVENLEMGCYGRKFPSRQEHAERLDWVFETFPRLAERRSQVG TH_3858|M.thermoresistible__bu RGVFPGMTVLENLDMGCYGRRFASRAEHRERLDWVLQTFPRLAERRDQVG Mflv_3570|M.gilvum_PYR-GCK RGVFPGMTIIDNLEMGCYGRKFATNAEHDEKLDWVLETFPRLAERRSQVG Mvan_2845|M.vanbaalenii_PYR-1 RGVFPGMTIVENLEMGCYGRKFPSKAEHDERLDWVLETFPRLAERRNQVG MAB_2622c|M.abscessus_ATCC_199 RGIFPGMTVAENLEMGCYGRKFKSRAERRERLDWINALFPRLAERRHQPG MAV_5181|M.avium_104 LSVEPALTGRQNVAWFAR-LYGVPRAERAERVDQALAAMD-LLDVADRLA . *. : : . : * : Mb1493c|M.bovis_AF2122/97 RRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDALRR Rv1458c|M.tuberculosis_H37Rv RRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDALRR MMAR_2263|M.marinum_M RRLSGGQQQRLALACALVGRPELVFLDEPTAGMDAHARLLVWELIDALRR MUL_1859|M.ulcerans_Agy99 RRLSGGQQQRLALACALVGRPELVFLDEPTAGMDAHARLLVWELIDALRR MLBr_00590|M.leprae_Br4923 RRLSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDTLRR MSMEG_3251|M.smegmatis_MC2_155 GTLSGGEQQMLAIGRALMARPKILLLDEPSMGLAPMVISQIFRIIADINS TH_3858|M.thermoresistible__bu GTLSGGEQQMLAIGRALMARPKVLLLDEPSMGLAPMVISQIFGIIADINA Mflv_3570|M.gilvum_PYR-GCK GTLSGGEQQMLAIGRALMARPKVLLLDEPSMGLAPMVISQIFKIIAEINA Mvan_2845|M.vanbaalenii_PYR-1 GTLSGGEQQMLAIGRALMARPKVLLLDEPSMGLAPMVISQIFRIIAEINA MAB_2622c|M.abscessus_ATCC_199 GTLSGGEQQMLSIGRALMARPKILLLDEPSMGLAPLLITKIFNIIEEINA MAV_5181|M.avium_104 SAYSGGMIRRLEVAQALVNRPSLLVLDEPTVGLDPIARDGVWEHVQKMQA *** : * :. :*: **.::.****: *: . :: : :. Mb1493c|M.bovis_AF2122/97 -DGVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLR Rv1458c|M.tuberculosis_H37Rv -DGVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLR MMAR_2263|M.marinum_M -DGVTVVLTTHQLKEAEELADRLVIIDHGVTVAEGTPSELMRSGAKDQLR MUL_1859|M.ulcerans_Agy99 -DGVTVVLTTHQLKEAEELADRLVIIDHGVTVAEGTPSELMRSGAKDQLR MLBr_00590|M.leprae_Br4923 -DGVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTELMHTGAKDQLR MSMEG_3251|M.smegmatis_MC2_155 -QGTTVLLVEQNAQQALSRSDRAYILETGNITRTGVARELLQD------- TH_3858|M.thermoresistible__bu -QGTTVLLVEQNAQQALSRSDRAYILETGEITRSGPARELLAD------- Mflv_3570|M.gilvum_PYR-GCK -TGTTVLLVEQNAQQALSRSDRAYILETGEVTRTGNARELLAD------- Mvan_2845|M.vanbaalenii_PYR-1 -AGTTVLLVEQNAQQALTRSDRAYILETGEVTRTGNARELLSD------- MAB_2622c|M.abscessus_ATCC_199 -AGTTVVLVEQNAQQALSRSDHAYILETGSVVRSGAGRELLQD------- MAV_5181|M.avium_104 RFAMTVLLTTHYMEEADALCDRVALMHRGALRAVGAPDELKARISRVSQH . **:*. : ::* .*: ::. * * ** Mb1493c|M.bovis_AF2122/97 FTAPPRLDLSLLASALPEGYQATELTPGEYLVEGPVDPQVLATVTAWCAQ Rv1458c|M.tuberculosis_H37Rv FTAPPRLDLSLLASALPEGYQATELTPGEYLVEGPVDPQVLATVTAWCAQ MMAR_2263|M.marinum_M FTAPPRLDLSLLVSALPEDYRVTEVTPGEYLVEGSVDPQVLAAVTAWCAR MUL_1859|M.ulcerans_Agy99 FTAPPRLDLSLLVSALPEDYRVTEVTPGEYLVEGSVDPQVLAAVTAWCAR MLBr_00590|M.leprae_Br4923 FSAPPRLDLSLLAFALPEDYKTTELTPGEYLVAGPIDPQVLATVTAWCAQ MSMEG_3251|M.smegmatis_MC2_155 -------------------------------------------------- TH_3858|M.thermoresistible__bu -------------------------------------------------- Mflv_3570|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2845|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_2622c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_5181|M.avium_104 ATLEDVFRHYAASDLGGDDAAHPRPS------------------------ Mb1493c|M.bovis_AF2122/97 IDVLATDMRVEQRSLEDVFLDLTGRKLRQ Rv1458c|M.tuberculosis_H37Rv IDVLATDMRVEQRSLEDVFLDLTGRKLRQ MMAR_2263|M.marinum_M IDVLATDMRVEQRSLEDVFLDLTGRKLRS MUL_1859|M.ulcerans_Agy99 IDVLATDMRVEQRSLEDVFLDLTGRKLRS MLBr_00590|M.leprae_Br4923 INVLTTNMRVEQHSLEDVFLDLTGRKLR- MSMEG_3251|M.smegmatis_MC2_155 ------------DSIRAAYLGVA------ TH_3858|M.thermoresistible__bu ------------DSIRAAYLGVA------ Mflv_3570|M.gilvum_PYR-GCK ------------DSIRAAYLGVA------ Mvan_2845|M.vanbaalenii_PYR-1 ------------KSIRAAYLGVA------ MAB_2622c|M.abscessus_ATCC_199 ------------DSIRSAYLGVV------ MAV_5181|M.avium_104 ------------GSIRQVRSSRKVARRVG *:. . .