For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_2463 (-)

annotation: putative sulfonate ABC transporter, permease
coordinates: 2517558 - 2518382
length: 274

VSIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDL
LNRGVLLQDAGISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGI
GNQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRGHIQTGIRVALGVA
WVVLVPAEMLGVRSGLGYQVLNARDQLAYDQVVAVILVIGILGYALDMAAKRLLASRFRVPSAG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_2463--100% (274)putative sulfonate ABC transporter, permease
M. abscessus ATCC 19977MAB_2216-3e-2829.64% (253) sulfonate ABC transporter, permease protein SsuC
M. abscessus ATCC 19977MAB_2242-2e-2430.13% (239) putative nitrate ABC transporter, permease protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3782cproZ2e-0925.53% (188) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. gilvum PYR-GCKMflv_3159-2e-2629.70% (266) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv3756cproZ2e-0925.53% (188) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. leprae Br4923-----
M. marinum MMMAR_5299proZ1e-0923.94% (188) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. avium 104MAV_2433-4e-3028.95% (266) putative aliphatic sulfonates transport permease protein SsuC
M. smegmatis MC2 155MSMEG_4523-1e-9368.92% (251) binding-protein-dependent transport systems inner membrane
M. thermoresistible (build 8)TH_4654-6e-2329.79% (235) PUTATIVE putative binding-protein-dependent transport systems
M. ulcerans Agy99MUL_4374proZ3e-1026.09% (184) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. vanbaalenii PYR-1Mvan_3413-2e-2930.09% (226) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


MAB_2463|M.abscessus_ATCC_1997      MSIIERAPRAVP-----------VGTVAAQKAL-------LLSRIWPPAL
MSMEG_4523|M.smegmatis_MC2_155      MTIAGTRNGPTT-----------AGEVSWQR------------RCAPPIT
Mflv_3159|M.gilvum_PYR-GCK          MTAVAAPLTTP--RGPAAPAPELVDVIAGHRGR-RSIWG-RIPRPVRRMA
TH_4654|M.thermoresistible__bu      VTSLQTARPAPRLRSPAQRRADVTDAQLLHRGEHRTRLGPGRAVPAALAV
MAV_2433|M.avium_104                MSIATALDAAP---------KRLGGAASGAPGG----LWARRKWEVVRLV
Mvan_3413|M.vanbaalenii_PYR-1       MTRPADPTAP------------LAQANSGRVG-----RRADRRWALIRLA
Mb3782c|M.bovis_AF2122/97           --------------------------------------------------
Rv3756c|M.tuberculosis_H37Rv        --------------------------------------------------
MMAR_5299|M.marinum_M               --------------------------------------------------
MUL_4374|M.ulcerans_Agy99           --------------------------------------------------
                                                                                      

MAB_2463|M.abscessus_ATCC_1997      AIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDAGI
MSMEG_4523|M.smegmatis_MC2_155      AILIAIALWWSATSVLSGPESVLRQTAPQHVVPALSGLLERQVLLGDLGV
Mflv_3159|M.gilvum_PYR-GCK          GPVAILAVWTIGSTSGLLNTDLFPP--PSDVAVTAWHLLTNGGLALHVGT
TH_4654|M.thermoresistible__bu      GPLLLVALWLITSQLGILDPRTLPH--PFDIARTAAELWSDGRLPANVAA
MAV_2433|M.avium_104                SPLALLALWQLGSAIGVIAQDVLPA--PSLILQAGVELTRNGQLADALHI
Mvan_3413|M.vanbaalenii_PYR-1       SPFILLAVWQLGSAVGLIPQDVLPA--PSLIAEAGIELIGNGQLVDALTV
Mb3782c|M.bovis_AF2122/97           -------------------MNFLQQ--ALSYLLTASNWTGPVGLAVRTCE
Rv3756c|M.tuberculosis_H37Rv        -------------------MNFLQQ--ALSYLLTASNWTGPVGLAVRTCE
MMAR_5299|M.marinum_M               -------------------MNFLQQ--ALSYLSTAANWTGSAGLAHRTAE
MUL_4374|M.ulcerans_Agy99           -------------------MNFLQQ--ALSYLSTAANWTGSAGLAHRTAE
                                                          :    .     :         *      

MAB_2463|M.abscessus_ATCC_1997      SLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTP
MSMEG_4523|M.smegmatis_MC2_155      SLWRLSIGLAVATVIGMPLGLLIGSSRIAERAGGPIIAFLRMISPLSWTP
Mflv_3159|M.gilvum_PYR-GCK          SATRVLIGTALGITVGVVLAVLAGLTRTGEDLLDWSMQILKAVPNFALTP
TH_4654|M.thermoresistible__bu      SLKLSLISLAIGVAAGLALALLAGLSRIGEALVDGPIQIKRAVPTLAIIP
MAV_2433|M.avium_104                STVRVIEGLALGGVIGIVAGAAVGLSRWVEATVDPPLQMIRALPHLGLIP
Mvan_3413|M.vanbaalenii_PYR-1       SGLRVVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMVRALPHLGLIP
Mb3782c|M.bovis_AF2122/97           HLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNGLRALPTLGVLL
Rv3756c|M.tuberculosis_H37Rv        HLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNGLRALPTLGVLL
MMAR_5299|M.marinum_M               HLEYTALAVTASALVAIPIGLIIGHTGRGQLLVVSAVNGLRALPTLGVLL
MUL_4374|M.ulcerans_Agy99           HLEYTALAATASALVAIPIGLIIGHTGRGQLLVVSAVNGLRALPTLGVLL
                                           .   .   .:  .   * :          :   : :. :.   

MAB_2463|M.abscessus_ATCC_1997      IAVAVFGIGNQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHAT
MSMEG_4523|M.smegmatis_MC2_155      IALAVFGIGNQPVVFLVAVAAVWPVLLNTAAGVRAVDPGLLNVARSFHAT
Mflv_3159|M.gilvum_PYR-GCK          LLIIWMGIGEGPKIVLITMGVAIAVYINTYSGIRGVDQQLVEMAQTLEAR
TH_4654|M.thermoresistible__bu      LAIIWFGIGDTMKIVIIATSVLIPVYINTTAQLKGVDLRHVELAQTVGLS
MAV_2433|M.avium_104                LFILWFGIGELPKVLLVALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFS
Mvan_3413|M.vanbaalenii_PYR-1       LFIIWFGIGELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFS
Mb3782c|M.bovis_AF2122/97           LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT
Rv3756c|M.tuberculosis_H37Rv        LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT
MMAR_5299|M.marinum_M               LGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVVDAARAMGMT
MUL_4374|M.ulcerans_Agy99           LGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVVDAARAMGMT
                                    : :  :*:*    :. :      .:  .* : :  ::   .. *: .   

MAB_2463|M.abscessus_ATCC_1997      RSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLN
MSMEG_4523|M.smegmatis_MC2_155      RWEMMLAVILPAIRTHVQTGIRLALGVAWIVLVPAEMLGVRSGLGYQILN
Mflv_3159|M.gilvum_PYR-GCK          RGTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMINTTEGIGFLMSR
TH_4654|M.thermoresistible__bu      RVQFIRKVALPGALPGFFTGLRLAVTISWTALVVVEQVNATSGVGFLMTQ
MAV_2433|M.avium_104                FFQRFRRILVPGTAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLINN
Mvan_3413|M.vanbaalenii_PYR-1       FWQRFRSIIVPSAAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLIMN
Mb3782c|M.bovis_AF2122/97           ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID
Rv3756c|M.tuberculosis_H37Rv        ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID
MMAR_5299|M.marinum_M               EAQVVLRVEMPNALPLILGGLR-SATLQVVATATVAAYASLGGLGRYLID
MUL_4374|M.ulcerans_Agy99           EAQVVLRVEMPNALPLILGGLR-SATLQVVATVTVAAYASLGGLGRYLID
                                        .  : :*     .  *:* .          .       *:*  :  

MAB_2463|M.abscessus_ATCC_1997      ARDQLAYDQVVAVILVIGILGYALDMAAKRLLASRFRVPSAG--------
MSMEG_4523|M.smegmatis_MC2_155      ARDQLAYDQVVAVIVVIGILGFLLDTTARWLLNPARRA------------
Mflv_3159|M.gilvum_PYR-GCK          AQTNLQFDVSLLVIVIYAVLGLASYALVRLLERLLLSWRNGFAGFEATA-
TH_4654|M.thermoresistible__bu      ARLYGQLEVVVVGLVVYAVFGLAGDHLVRTIERRALSWRRALGG------
MAV_2433|M.avium_104                ARDFLRIDIIIFGLTIYALLGIITDAVVRLIERRAVRYRH----------
Mvan_3413|M.vanbaalenii_PYR-1       ARDFLRIDIIIFGLIVYALLGIGTDAVVRALERRALRYRS----------
Mb3782c|M.bovis_AF2122/97           GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL-----
Rv3756c|M.tuberculosis_H37Rv        GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL-----
MMAR_5299|M.marinum_M               GIKERQFHIALVGALMVAALALSLDGLLALAGWASVPGTGRLSRFWHQSD
MUL_4374|M.ulcerans_Agy99           GIKERQSHIALVGALMVAALALSLDGLLALAGWASVPGTGRVSRFWHQPD
                                    .      .  :    : . :.                             

MAB_2463|M.abscessus_ATCC_1997      --------------------
MSMEG_4523|M.smegmatis_MC2_155      --------------------
Mflv_3159|M.gilvum_PYR-GCK          --------------------
TH_4654|M.thermoresistible__bu      --------------------
MAV_2433|M.avium_104                --------------------
Mvan_3413|M.vanbaalenii_PYR-1       --------------------
Mb3782c|M.bovis_AF2122/97           ----AAVVDKPAAGGGHALR
Rv3756c|M.tuberculosis_H37Rv        ----AAVVDKPAAGGGHALR
MMAR_5299|M.marinum_M               DRIDVAVSPNSAAVGSHVLR
MUL_4374|M.ulcerans_Agy99           DRIDVAVSANSAAVGSHVLR