For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTRNTLVAAAATDSDAPESGPSRREWVLERRWEIVRFLSPLAVLLIWQAGSAWGLIDPDILPAPSTIAR AGFELIANGQLAEALRVSGVRAAEGLLLGGVIGVVLGAAVGLSRLADAVVDPTMQMIRALPHLGLIPLFI VWFGIGELPKVLMVALGAAFPLYLNTTSAIRQVDPKLFETAQVLGFSFWQRLRVIVIPGATPQVLVGLRQ SLALSWLTLIVAEQINADAGVGFLINNARDFLRIDVIIFGLVVYALLGIVTDAIVRVLERRALRYRS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2216 | - | - | 100% (277) | sulfonate ABC transporter, permease protein SsuC |
M. abscessus ATCC 19977 | MAB_2176 | - | 3e-34 | 30.15% (272) | ABC transporter permease |
M. abscessus ATCC 19977 | MAB_2463 | - | 3e-28 | 29.64% (253) | putative sulfonate ABC transporter, permease |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3782c | proZ | 3e-12 | 26.59% (173) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) |
M. gilvum PYR-GCK | Mflv_3159 | - | 3e-53 | 41.91% (241) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv3756c | proZ | 3e-12 | 26.59% (173) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_0033 | - | 3e-14 | 27.75% (191) | hypothetical protein MMAR_0033 |
M. avium 104 | MAV_2433 | - | 1e-106 | 70.85% (271) | putative aliphatic sulfonates transport permease protein SsuC |
M. smegmatis MC2 155 | MSMEG_3854 | - | 1e-110 | 75.48% (261) | putative aliphatic sulfonates transport permease protein SsuC |
M. thermoresistible (build 8) | TH_4654 | - | 8e-52 | 38.95% (267) | PUTATIVE putative binding-protein-dependent transport systems |
M. ulcerans Agy99 | MUL_4374 | proZ | 1e-11 | 26.63% (184) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) |
M. vanbaalenii PYR-1 | Mvan_3413 | - | 1e-108 | 76.61% (248) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3854|M.smegmatis_MC2_155 ------MLAAPTAPTVTR--------RLSHRKW-----------AIIRVI Mvan_3413|M.vanbaalenii_PYR-1 ----MTRPADPTAPLAQANSGRVG--RRADRRW-----------ALIRLA MAV_2433|M.avium_104 MSIATALDAAPKRLGGAASGAPGG--LWARRKW-----------EVVRLV MAB_2216|M.abscessus_ATCC_1997 MTTRNTLVAAAATDSDAPESGPSRREWVLERRW-----------EIVRFL Mflv_3159|M.gilvum_PYR-GCK MTAVAAPLTTP--RGPAAPAPELVDVIAGHRGR-RSIWG-RIPRPVRRMA TH_4654|M.thermoresistible__bu VTSLQTARPAPRLRSPAQRRADVTDAQLLHRGEHRTRLGPGRAVPAALAV Mb3782c|M.bovis_AF2122/97 -------------------------------------------------- Rv3756c|M.tuberculosis_H37Rv -------------------------------------------------- MUL_4374|M.ulcerans_Agy99 -------------------------------------------------- MMAR_0033|M.marinum_M ---MSVAGNDINVEGAVKGGAEGPPTAPTTPGR----------------- MSMEG_3854|M.smegmatis_MC2_155 SPVVLLGLWQLGSAVGLISQDVLPAPSLIVEAGIELIRNGQLADALRVSG Mvan_3413|M.vanbaalenii_PYR-1 SPFILLAVWQLGSAVGLIPQDVLPAPSLIAEAGIELIGNGQLVDALTVSG MAV_2433|M.avium_104 SPLALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHIST MAB_2216|M.abscessus_ATCC_1997 SPLAVLLIWQAGSAWGLIDPDILPAPSTIARAGFELIANGQLAEALRVSG Mflv_3159|M.gilvum_PYR-GCK GPVAILAVWTIGSTSGLLNTDLFPPPSDVAVTAWHLLTNGGLALHVGTSA TH_4654|M.thermoresistible__bu GPLLLVALWLITSQLGILDPRTLPHPFDIARTAAELWSDGRLPANVAASL Mb3782c|M.bovis_AF2122/97 -------------------MNFLQQALSYLLTASNWTGPVGLAVRTCEHL Rv3756c|M.tuberculosis_H37Rv -------------------MNFLQQALSYLLTASNWTGPVGLAVRTCEHL MUL_4374|M.ulcerans_Agy99 -------------------MNFLQQALSYLSTAANWTGSAGLAHRTAEHL MMAR_0033|M.marinum_M PSVGRWALQPLTCAFAVAGALAYVTVADVSESERRSLSVSHLLQLLREHL : . * MSMEG_3854|M.smegmatis_MC2_155 ARVVIGLLLGGVIGVALGTAVG--LSRWLEATVDPPMQMIRALPHLGLIP Mvan_3413|M.vanbaalenii_PYR-1 LRVVEGLILGGVIGIALGTAVG--LSKWFEATVDPPMQMVRALPHLGLIP MAV_2433|M.avium_104 VRVIEGLALGGVIGIVAGAAVG--LSRWVEATVDPPLQMIRALPHLGLIP MAB_2216|M.abscessus_ATCC_1997 VRAAEGLLLGGVIGVVLGAAVG--LSRLADAVVDPTMQMIRALPHLGLIP Mflv_3159|M.gilvum_PYR-GCK TRVLIGTALGITVGVVLAVLAG--LTRTGEDLLDWSMQILKAVPNFALTP TH_4654|M.thermoresistible__bu KLSLISLAIGVAAGLALALLAG--LSRIGEALVDGPIQIKRAVPTLAIIP Mb3782c|M.bovis_AF2122/97 EYTAVAVAASALIAVPVGLLIG--HTGRGTLLVVGAVNGLRALPTLGVLL Rv3756c|M.tuberculosis_H37Rv EYTAVAVAASALIAVPVGLLIG--HTGRGTLLVVGAVNGLRALPTLGVLL MUL_4374|M.ulcerans_Agy99 EYTALAATASALVAIPIGLIIG--HTGRGQLLVVSAVNGLRALPTLGVLL MMAR_0033|M.marinum_M VISLSATVLTCVVAIPVGIALTRGSMRRYSKPIITVAGFGQAAPAIGLIA . .: . : :* * :.: MSMEG_3854|M.smegmatis_MC2_155 LFIVWFGIGELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFS Mvan_3413|M.vanbaalenii_PYR-1 LFIIWFGIGELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFS MAV_2433|M.avium_104 LFILWFGIGELPKVLLVALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFS MAB_2216|M.abscessus_ATCC_1997 LFIVWFGIGELPKVLMVALGAAFPLYLNTTSAIRQVDPKLFETAQVLGFS Mflv_3159|M.gilvum_PYR-GCK LLIIWMGIGEGPKIVLITMGVAIAVYINTYSGIRGVDQQLVEMAQTLEAR TH_4654|M.thermoresistible__bu LAIIWFGIGDTMKIVIIATSVLIPVYINTTAQLKGVDLRHVELAQTVGLS Mb3782c|M.bovis_AF2122/97 LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT Rv3756c|M.tuberculosis_H37Rv LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT MUL_4374|M.ulcerans_Agy99 LGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVVDAARAMGMT MMAR_0033|M.marinum_M LGAVVFGIGQLGAIVALTVYGAMPIIANTVTGLDGVDRRIVEAARGMGLS * : :*:* :: : .: .* : : ** .: *: : MSMEG_3854|M.smegmatis_MC2_155 FWQRFRTIIVPSAAPQVLVGFRQSLAIAWLTLIVAEQINADSGIGFLINN Mvan_3413|M.vanbaalenii_PYR-1 FWQRFRSIIVPSAAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLIMN MAV_2433|M.avium_104 FFQRFRRILVPGTAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLINN MAB_2216|M.abscessus_ATCC_1997 FWQRLRVIVIPGATPQVLVGLRQSLALSWLTLIVAEQINADAGVGFLINN Mflv_3159|M.gilvum_PYR-GCK RGTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMINTTEGIGFLMSR TH_4654|M.thermoresistible__bu RVQFIRKVALPGALPGFFTGLRLAVTISWTALVVVEQVNATSGVGFLMTQ Mb3782c|M.bovis_AF2122/97 ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID Rv3756c|M.tuberculosis_H37Rv ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID MUL_4374|M.ulcerans_Agy99 EAQVVLRVEMPNALPLILGGLR-SATLQVVATVTVAAYASLGGLGRYLID MMAR_0033|M.marinum_M AFSTLRRVELPLSLPVIVAGVR-TALVLIVGTAALASFTGGGGLGQLITT . : :* : * .. *.* *:* : MSMEG_3854|M.smegmatis_MC2_155 ARDFLRIDIIIFGLIVYALLGIGTDAIVRALERRALRYRT---------- Mvan_3413|M.vanbaalenii_PYR-1 ARDFLRIDIIIFGLIVYALLGIGTDAVVRALERRALRYRS---------- MAV_2433|M.avium_104 ARDFLRIDIIIFGLTIYALLGIITDAVVRLIERRAVRYRH---------- MAB_2216|M.abscessus_ATCC_1997 ARDFLRIDVIIFGLVVYALLGIVTDAIVRVLERRALRYRS---------- Mflv_3159|M.gilvum_PYR-GCK AQTNLQFDVSLLVIVIYAVLGLASYALVRLLERLLLSWRNGFAGFEATA- TH_4654|M.thermoresistible__bu ARLYGQLEVVVVGLVVYAVFGLAGDHLVRTIERRALSWRRALGG------ Mb3782c|M.bovis_AF2122/97 GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL----- Rv3756c|M.tuberculosis_H37Rv GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL----- MUL_4374|M.ulcerans_Agy99 GIKERQSHIALVGALMVAALALSLDGLLALAGWASVPGTGRVSRFWHQPD MMAR_0033|M.marinum_M GIKLQQPVTLIVGAILVAALALFIDWLARLIEMVAAPRGL---------- . : :. : * :.: : MSMEG_3854|M.smegmatis_MC2_155 -------------------- Mvan_3413|M.vanbaalenii_PYR-1 -------------------- MAV_2433|M.avium_104 -------------------- MAB_2216|M.abscessus_ATCC_1997 -------------------- Mflv_3159|M.gilvum_PYR-GCK -------------------- TH_4654|M.thermoresistible__bu -------------------- Mb3782c|M.bovis_AF2122/97 ----AAVVDKPAAGGGHALR Rv3756c|M.tuberculosis_H37Rv ----AAVVDKPAAGGGHALR MUL_4374|M.ulcerans_Agy99 DRIDVAVSANSAAVGSHVLR MMAR_0033|M.marinum_M --------------------