For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_2216 (-)

annotation: sulfonate ABC transporter, permease protein SsuC
coordinates: 2238992 - 2239825
length: 277

MTTRNTLVAAAATDSDAPESGPSRREWVLERRWEIVRFLSPLAVLLIWQAGSAWGLIDPDILPAPSTIAR
AGFELIANGQLAEALRVSGVRAAEGLLLGGVIGVVLGAAVGLSRLADAVVDPTMQMIRALPHLGLIPLFI
VWFGIGELPKVLMVALGAAFPLYLNTTSAIRQVDPKLFETAQVLGFSFWQRLRVIVIPGATPQVLVGLRQ
SLALSWLTLIVAEQINADAGVGFLINNARDFLRIDVIIFGLVVYALLGIVTDAIVRVLERRALRYRS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_2216--100% (277)sulfonate ABC transporter, permease protein SsuC
M. abscessus ATCC 19977MAB_2176-3e-3430.15% (272) ABC transporter permease
M. abscessus ATCC 19977MAB_2463-3e-2829.64% (253) putative sulfonate ABC transporter, permease

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3782cproZ3e-1226.59% (173) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. gilvum PYR-GCKMflv_3159-3e-5341.91% (241) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv3756cproZ3e-1226.59% (173) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. leprae Br4923-----
M. marinum MMMAR_0033-3e-1427.75% (191) hypothetical protein MMAR_0033
M. avium 104MAV_2433-1e-10670.85% (271) putative aliphatic sulfonates transport permease protein SsuC
M. smegmatis MC2 155MSMEG_3854-1e-11075.48% (261) putative aliphatic sulfonates transport permease protein SsuC
M. thermoresistible (build 8)TH_4654-8e-5238.95% (267) PUTATIVE putative binding-protein-dependent transport systems
M. ulcerans Agy99MUL_4374proZ1e-1126.63% (184) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. vanbaalenii PYR-1Mvan_3413-1e-10876.61% (248) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3854|M.smegmatis_MC2_155      ------MLAAPTAPTVTR--------RLSHRKW-----------AIIRVI
Mvan_3413|M.vanbaalenii_PYR-1       ----MTRPADPTAPLAQANSGRVG--RRADRRW-----------ALIRLA
MAV_2433|M.avium_104                MSIATALDAAPKRLGGAASGAPGG--LWARRKW-----------EVVRLV
MAB_2216|M.abscessus_ATCC_1997      MTTRNTLVAAAATDSDAPESGPSRREWVLERRW-----------EIVRFL
Mflv_3159|M.gilvum_PYR-GCK          MTAVAAPLTTP--RGPAAPAPELVDVIAGHRGR-RSIWG-RIPRPVRRMA
TH_4654|M.thermoresistible__bu      VTSLQTARPAPRLRSPAQRRADVTDAQLLHRGEHRTRLGPGRAVPAALAV
Mb3782c|M.bovis_AF2122/97           --------------------------------------------------
Rv3756c|M.tuberculosis_H37Rv        --------------------------------------------------
MUL_4374|M.ulcerans_Agy99           --------------------------------------------------
MMAR_0033|M.marinum_M               ---MSVAGNDINVEGAVKGGAEGPPTAPTTPGR-----------------
                                                                                      

MSMEG_3854|M.smegmatis_MC2_155      SPVVLLGLWQLGSAVGLISQDVLPAPSLIVEAGIELIRNGQLADALRVSG
Mvan_3413|M.vanbaalenii_PYR-1       SPFILLAVWQLGSAVGLIPQDVLPAPSLIAEAGIELIGNGQLVDALTVSG
MAV_2433|M.avium_104                SPLALLALWQLGSAIGVIAQDVLPAPSLILQAGVELTRNGQLADALHIST
MAB_2216|M.abscessus_ATCC_1997      SPLAVLLIWQAGSAWGLIDPDILPAPSTIARAGFELIANGQLAEALRVSG
Mflv_3159|M.gilvum_PYR-GCK          GPVAILAVWTIGSTSGLLNTDLFPPPSDVAVTAWHLLTNGGLALHVGTSA
TH_4654|M.thermoresistible__bu      GPLLLVALWLITSQLGILDPRTLPHPFDIARTAAELWSDGRLPANVAASL
Mb3782c|M.bovis_AF2122/97           -------------------MNFLQQALSYLLTASNWTGPVGLAVRTCEHL
Rv3756c|M.tuberculosis_H37Rv        -------------------MNFLQQALSYLLTASNWTGPVGLAVRTCEHL
MUL_4374|M.ulcerans_Agy99           -------------------MNFLQQALSYLSTAANWTGSAGLAHRTAEHL
MMAR_0033|M.marinum_M               PSVGRWALQPLTCAFAVAGALAYVTVADVSESERRSLSVSHLLQLLREHL
                                                                   :  .      *        

MSMEG_3854|M.smegmatis_MC2_155      ARVVIGLLLGGVIGVALGTAVG--LSRWLEATVDPPMQMIRALPHLGLIP
Mvan_3413|M.vanbaalenii_PYR-1       LRVVEGLILGGVIGIALGTAVG--LSKWFEATVDPPMQMVRALPHLGLIP
MAV_2433|M.avium_104                VRVIEGLALGGVIGIVAGAAVG--LSRWVEATVDPPLQMIRALPHLGLIP
MAB_2216|M.abscessus_ATCC_1997      VRAAEGLLLGGVIGVVLGAAVG--LSRLADAVVDPTMQMIRALPHLGLIP
Mflv_3159|M.gilvum_PYR-GCK          TRVLIGTALGITVGVVLAVLAG--LTRTGEDLLDWSMQILKAVPNFALTP
TH_4654|M.thermoresistible__bu      KLSLISLAIGVAAGLALALLAG--LSRIGEALVDGPIQIKRAVPTLAIIP
Mb3782c|M.bovis_AF2122/97           EYTAVAVAASALIAVPVGLLIG--HTGRGTLLVVGAVNGLRALPTLGVLL
Rv3756c|M.tuberculosis_H37Rv        EYTAVAVAASALIAVPVGLLIG--HTGRGTLLVVGAVNGLRALPTLGVLL
MUL_4374|M.ulcerans_Agy99           EYTALAATASALVAIPIGLIIG--HTGRGQLLVVSAVNGLRALPTLGVLL
MMAR_0033|M.marinum_M               VISLSATVLTCVVAIPVGIALTRGSMRRYSKPIITVAGFGQAAPAIGLIA
                                         .       .:  .              :       :* * :.:  

MSMEG_3854|M.smegmatis_MC2_155      LFIVWFGIGELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFS
Mvan_3413|M.vanbaalenii_PYR-1       LFIIWFGIGELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFS
MAV_2433|M.avium_104                LFILWFGIGELPKVLLVALGVVFPLYLNTFSAIRQVDPKMLETAQVLGFS
MAB_2216|M.abscessus_ATCC_1997      LFIVWFGIGELPKVLMVALGAAFPLYLNTTSAIRQVDPKLFETAQVLGFS
Mflv_3159|M.gilvum_PYR-GCK          LLIIWMGIGEGPKIVLITMGVAIAVYINTYSGIRGVDQQLVEMAQTLEAR
TH_4654|M.thermoresistible__bu      LAIIWFGIGDTMKIVIIATSVLIPVYINTTAQLKGVDLRHVELAQTVGLS
Mb3782c|M.bovis_AF2122/97           LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT
Rv3756c|M.tuberculosis_H37Rv        LGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT
MUL_4374|M.ulcerans_Agy99           LGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVVDAARAMGMT
MMAR_0033|M.marinum_M               LGAVVFGIGQLGAIVALTVYGAMPIIANTVTGLDGVDRRIVEAARGMGLS
                                    *  : :*:*    :: :      .:  .* : :  **   .: *: :   

MSMEG_3854|M.smegmatis_MC2_155      FWQRFRTIIVPSAAPQVLVGFRQSLAIAWLTLIVAEQINADSGIGFLINN
Mvan_3413|M.vanbaalenii_PYR-1       FWQRFRSIIVPSAAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLIMN
MAV_2433|M.avium_104                FFQRFRRILVPGTAPQVLVGLRQSLAIAWLTLIVAEQINADKGIGFLINN
MAB_2216|M.abscessus_ATCC_1997      FWQRLRVIVIPGATPQVLVGLRQSLALSWLTLIVAEQINADAGVGFLINN
Mflv_3159|M.gilvum_PYR-GCK          RGTLITQVILPGAMPNFLVGLRLGLSSAWLSLIFAEMINTTEGIGFLMSR
TH_4654|M.thermoresistible__bu      RVQFIRKVALPGALPGFFTGLRLAVTISWTALVVVEQVNATSGVGFLMTQ
Mb3782c|M.bovis_AF2122/97           ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID
Rv3756c|M.tuberculosis_H37Rv        ESQVLLRVEVPNALPLMLGGLR-SATLQVVATATVAAYASLGGLGGYLID
MUL_4374|M.ulcerans_Agy99           EAQVVLRVEMPNALPLILGGLR-SATLQVVATVTVAAYASLGGLGRYLID
MMAR_0033|M.marinum_M               AFSTLRRVELPLSLPVIVAGVR-TALVLIVGTAALASFTGGGGLGQLITT
                                        .  : :* : * .. *.*                    *:*  :  

MSMEG_3854|M.smegmatis_MC2_155      ARDFLRIDIIIFGLIVYALLGIGTDAIVRALERRALRYRT----------
Mvan_3413|M.vanbaalenii_PYR-1       ARDFLRIDIIIFGLIVYALLGIGTDAVVRALERRALRYRS----------
MAV_2433|M.avium_104                ARDFLRIDIIIFGLTIYALLGIITDAVVRLIERRAVRYRH----------
MAB_2216|M.abscessus_ATCC_1997      ARDFLRIDVIIFGLVVYALLGIVTDAIVRVLERRALRYRS----------
Mflv_3159|M.gilvum_PYR-GCK          AQTNLQFDVSLLVIVIYAVLGLASYALVRLLERLLLSWRNGFAGFEATA-
TH_4654|M.thermoresistible__bu      ARLYGQLEVVVVGLVVYAVFGLAGDHLVRTIERRALSWRRALGG------
Mb3782c|M.bovis_AF2122/97           GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL-----
Rv3756c|M.tuberculosis_H37Rv        GIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL-----
MUL_4374|M.ulcerans_Agy99           GIKERQSHIALVGALMVAALALSLDGLLALAGWASVPGTGRVSRFWHQPD
MMAR_0033|M.marinum_M               GIKLQQPVTLIVGAILVAALALFIDWLARLIEMVAAPRGL----------
                                    .    :    :.   : * :.:    :                       

MSMEG_3854|M.smegmatis_MC2_155      --------------------
Mvan_3413|M.vanbaalenii_PYR-1       --------------------
MAV_2433|M.avium_104                --------------------
MAB_2216|M.abscessus_ATCC_1997      --------------------
Mflv_3159|M.gilvum_PYR-GCK          --------------------
TH_4654|M.thermoresistible__bu      --------------------
Mb3782c|M.bovis_AF2122/97           ----AAVVDKPAAGGGHALR
Rv3756c|M.tuberculosis_H37Rv        ----AAVVDKPAAGGGHALR
MUL_4374|M.ulcerans_Agy99           DRIDVAVSANSAAVGSHVLR
MMAR_0033|M.marinum_M               --------------------