For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_2040c (-)

annotation: hypothetical protein MAB_2040c
coordinates: 2041870 - 2042448
length: 192

TMAERVPMLDREQAQLRAAECGLPEELAELSVFRVALHQPRVAVALYGLLDALLFRGSLDARLRELVILR
IGWITGSEYEWTQHWRIATLLGVPERDLLAVRDWQNSESLGPVERAVLAATDDVVRDGVISEENWAGCQK
AFNSDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDGWPPDGRAPRRRD*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_2040c--100% (192)hypothetical protein MAB_2040c
M. abscessus ATCC 19977MAB_4488c-3e-1230.68% (176) carboxymuconolactone decarboxylase
M. abscessus ATCC 19977MAB_3073-2e-1031.86% (113) hypothetical protein MAB_3073

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1558-1e-5753.26% (184) hypothetical protein Mb1558
M. gilvum PYR-GCKMflv_4627-5e-7268.89% (180) carboxymuconolactone decarboxylase
M. tuberculosis H37RvRv1531-1e-5753.26% (184) hypothetical protein Rv1531
M. leprae Br4923MLBr_02465-1e-0928.48% (151) hypothetical protein MLBr_02465
M. marinum MMMAR_3164-6e-9284.38% (192) hypothetical protein MMAR_3164
M. avium 104MAV_3238pcaC2e-5755.19% (183) hypothetical protein MAV_3238
M. smegmatis MC2 155MSMEG_4839-1e-1131.45% (159) carboxymuconolactone decarboxylase
M. thermoresistible (build 8)TH_2018-2e-1130.30% (165) carboxymuconolactone decarboxylase
M. ulcerans Agy99MUL_4533-5e-0622.06% (136) hypothetical protein MUL_4533
M. vanbaalenii PYR-1Mvan_4316-1e-1127.95% (161) carboxymuconolactone decarboxylase

CLUSTAL 2.0.9 multiple sequence alignment


Mb1558|M.bovis_AF2122/97            ---------------------------------------MTTSRVPLLPV
Rv1531|M.tuberculosis_H37Rv         ---------------------------------------MTTSRVPLLPV
MAV_3238|M.avium_104                ---------------------------------------MPTARLPKLPL
MAB_2040c|M.abscessus_ATCC_199      --------------------------------------MTMAERVPMLDR
MMAR_3164|M.marinum_M               --------------------------------------MTRTERVPMLDL
Mflv_4627|M.gilvum_PYR-GCK          ----------------------------------------------MLAL
MSMEG_4839|M.smegmatis_MC2_155      -------------------------MRLTPLPADEWDDEVRLALSVML--
TH_2018|M.thermoresistible__bu      -------------------------VRLAPLPAEQWDDEVLSALAVML--
Mvan_4316|M.vanbaalenii_PYR-1       MPFEPRPSHPRQRRTQHMNSTDGAESLLAPLTAAEWGDDEYAAFGALLGL
MLBr_02465|M.leprae_Br4923          ---------------------------MSGGTGTGPVGRIPPGSLRQLG-
MUL_4533|M.ulcerans_Agy99           ---------------------------MTG----DQVARIPSGGIRQLG-
                                                                                   *  

Mb1558|M.bovis_AF2122/97            DEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDS
Rv1531|M.tuberculosis_H37Rv         DEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDS
MAV_3238|M.avium_104                DEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALDS
MAB_2040c|M.abscessus_ATCC_199      EQAQLRAAECGLPEELAELSVFRVALHQPRVAVALYGLLDALLFRGSLDA
MMAR_3164|M.marinum_M               EQARLRAAECGLPAEMAELSVFRVALHQPSLAVALYGMLEALLFNGVLDA
Mflv_4627|M.gilvum_PYR-GCK          TDARERAAQCGIPDAMAELSVFRIALHQPPVAVALHGMLEALLWKGALDA
MSMEG_4839|M.smegmatis_MC2_155      PEERLNPEGAGTALS--------TLARHPRLTKAFLRFSNHLLFRSTLDP
TH_2018|M.thermoresistible__bu      PEERRNPDGAGTALS--------TLVRHPRLTKAFLRFSNHLLFRSTLPP
Mvan_4316|M.vanbaalenii_PYR-1       PGEKVPRAGSGHAADPLKFDIIGLLARHPKMARRFLTFNGWLLQCGELPL
MLBr_02465|M.leprae_Br4923          PINWVIAKLAASLLRTSEMHLFTILGQRQLLFWAWLIYGGRLLR-GKLPR
MUL_4533|M.ulcerans_Agy99           PVNWALAKLAARSVRAPEMHLFTALGYRQYLFWTWAIYSGRLLH-GRLPR
                                             ..                :  :          :*  . *  

Mb1558|M.bovis_AF2122/97            RLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFG
Rv1531|M.tuberculosis_H37Rv         RLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFG
MAV_3238|M.avium_104                RLRELIIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFG
MAB_2040c|M.abscessus_ATCC_199      RLRELVILRIGWITGSEYEWTQHWRIATLLGVPERDLLAVRDWQNSESLG
MMAR_3164|M.marinum_M               RLRELIIMRIGWVTGSVYEWTQHWRIATLLGVASDDLLAVRDWQSSNRLG
Mflv_4627|M.gilvum_PYR-GCK          RLRELIIMRIGWVTDSVYEWTQHWRVARLLDVPERDLLGVRDWQNAGHFG
MSMEG_4839|M.smegmatis_MC2_155      RLRELAILRIARRRNCEYEWAHHAFIGKAEGLTDDDIDGIGRG---VVSD
TH_2018|M.thermoresistible__bu      RLRELAVLRVAHRRSCDYEWAHHVFIGKAEGLTDDDIAGVQRG---AVDD
Mvan_4316|M.vanbaalenii_PYR-1       RLRELAILRIAHTRRSAFFWGEHTKVATEGGVPEADIARLAEGN--EAFT
MLBr_02465|M.leprae_Br4923          VDTELVILRVAHLRTCEYELQHHRRMARKRGLDTKIQAMIFAWPDVPTGA
MUL_4533|M.ulcerans_Agy99           IDTELVILRVAHLRSCEYELQHHRRMARAAGLDAHAQATIFAWPDAPQGD
                                       ** ::*:.    . :   .*  :.   .:       :          

Mb1558|M.bovis_AF2122/97            P-------AEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVT
Rv1531|M.tuberculosis_H37Rv         P-------AEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVT
MAV_3238|M.avium_104                P-------TERAVLAATDDVVRHGSVSAASWAQCEHEFKRDTTVLVELVT
MAB_2040c|M.abscessus_ATCC_199      P-------VERAVLAATDDVVRDGVISEENWAGCQKAFNSDHAVLVELVG
MMAR_3164|M.marinum_M               H-------AERAVLAATDDVVRDGVIAEENWAACHKAFNGDHAVLVELVG
Mflv_4627|M.gilvum_PYR-GCK          E-------AERAVLAATDETLRDGTISDETWAECQRALHGDPAVLVELVA
MSMEG_4839|M.smegmatis_MC2_155      P-------FDQVVIDAVDELDELSTISDPTWAALGEKLD--DRQRMDLVF
TH_2018|M.thermoresistible__bu      P-------FDQAVLDAVDELEEHYRISDATWATLGARLD--ERQLMDLVF
Mvan_4316|M.vanbaalenii_PYR-1       G-------ADRLVLDATDELLHDGHAEPATWHRLTDELG--THQAMELIF
MLBr_02465|M.leprae_Br4923          G----LSVRQQALLAATDEFVKDRKITSSSWQQLETHLD--RRRLIEFCM
MUL_4533|M.ulcerans_Agy99           GPRRVLSSRQQALLTATDELIKNRSVTPATWEQLEIHLN--RRRLIEFCL
                                             :: :: *.*:  .       .*      :       :::  

Mb1558|M.bovis_AF2122/97            VISAWRMVASILHSLEVPLEDGVSS--WPPDGLSPR----
Rv1531|M.tuberculosis_H37Rv         VISAWRMVASILHSLEVPLEDGVSS--WPPDGLSPR----
MAV_3238|M.avium_104                VIGAWRMVASILQSLEVPLEDGVAS--WPPDGREPAS---
MAB_2040c|M.abscessus_ATCC_199      AIANWRLFSILLRSLNIPLESGTDG--WPPDGRAPRRRD-
MMAR_3164|M.marinum_M               AIANWRLFSILLRSLNIPLESGTDS--WPPDGRAPRRDD-
Mflv_4627|M.gilvum_PYR-GCK          AIGNWRLFSALLRSLHVPLEDGLEG--WPPDGVRPSVD--
MSMEG_4839|M.smegmatis_MC2_155      TVGGYGLMAMAYNTFGIEPESGH-----------------
TH_2018|M.thermoresistible__bu      TVGCYGLMAMAYNTFGITPETGR-----------------
Mvan_4316|M.vanbaalenii_PYR-1       VVGTYAMLAMAFDTWRLPPPAGSASLPEPPAGVPPGGGTH
MLBr_02465|M.leprae_Br4923          LISQYDGLAATISSLDIPLDNSC-----------------
MUL_4533|M.ulcerans_Agy99           LATQYDALAATITALGVPLDNPR-----------------
                                        :  .:    :  :