For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTGPRKGARYHGDQALIPGVLDFAVNVRAAAPPPWLRDRLASRLDELGSYPRREDEQRAVDAVAERHGRP PDEVLLLAGAAEGFAMLPRLNPRRAAVVAPGFTEPEAVLADAGIPLEHVVLPPPFTLGDTVRVPDEADLV VVGNPTNPTGVLHTREQLLALRRPGRILVVDEAFIDAVPGEPESVASLSLPGLVVLRSLTKTWALAGLRA GYAVGDPELLRRLARGRAHWPLGTLQLEALAACNTAQAVGSAVLDAQRLVETRHRQAEGLRGLGLAVTEG VAPFLLVAVPHADLMRKHLKVKNIAVRRCDTFVGLDGDYLRVAVRPEWPELVQAMKEIL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1902 | - | - | 100% (339) | hypothetical protein MAB_1902 |
M. abscessus ATCC 19977 | MAB_0220c | - | 3e-17 | 27.05% (281) | putative aminotransferase |
M. abscessus ATCC 19977 | MAB_2168 | - | 9e-15 | 30.11% (279) | putative aminotransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2256c | cobC | 1e-116 | 64.29% (336) | hypothetical protein Mb2256c |
M. gilvum PYR-GCK | Mflv_1195 | - | 1e-13 | 25.44% (283) | putative aminotransferase |
M. tuberculosis H37Rv | Rv2231c | cobC | 1e-116 | 64.29% (336) | hypothetical protein Rv2231c |
M. leprae Br4923 | MLBr_01488 | - | 1e-10 | 30.25% (238) | N-succinyldiaminopimelate aminotransferase |
M. marinum M | MMAR_3307 | cobC | 1e-119 | 64.69% (337) | aminotransferase CobC |
M. avium 104 | MAV_2208 | - | 1e-117 | 65.76% (330) | hypothetical protein MAV_2208 |
M. smegmatis MC2 155 | MSMEG_5121 | - | 1e-13 | 28.01% (357) | N-succinyldiaminopimelate aminotransferase |
M. thermoresistible (build 8) | TH_1662 | hisC2 | 9e-17 | 27.05% (281) | PROBABLE HISTIDINOL-PHOSPHATE AMINOTRANSFERASE HISC2 |
M. ulcerans Agy99 | MUL_1321 | cobC | 1e-118 | 64.39% (337) | hypothetical protein MUL_1321 |
M. vanbaalenii PYR-1 | Mvan_5611 | - | 2e-12 | 23.93% (280) | putative aminotransferase |
CLUSTAL 2.0.9 multiple sequence alignment Mb2256c|M.bovis_AF2122/97 MLWILGPHTGPLLFDAVASLDTSPLAAARYHGDQDVAPGVLDFAVNVRHD Rv2231c|M.tuberculosis_H37Rv MLWILGPHTGPLLFDAVASLDTSPLAAARYHGDQDVAPGVLDFAVNVRHD MMAR_3307|M.marinum_M -----------------MSLDTSPLAAARYHGDQAATPGMLDFAVNVRHP MUL_1321|M.ulcerans_Agy99 ----------------MVSLDTSPLAAARYHGDQAATPGMLDFAVNVRHP MAV_2208|M.avium_104 ----------------MASLNLSP-PAARYHGDQAVAPGMLDFAVNVRHS MAB_1902|M.abscessus_ATCC_1997 --------------------MTGPRKGARYHGDQALIPGVLDFAVNVRAA Mflv_1195|M.gilvum_PYR-GCK -------MRAGHKLSQVSARLRPELADLPAYTPGRTVPGAIKIASNETVH Mvan_5611|M.vanbaalenii_PYR-1 ----------------MSARLRPELADLPAYAPGKTVPGAIKIASNETVH TH_1662|M.thermoresistible__bu ----------------VTARLRPELADIPAYVPGKMVPGAIKIASNETVH MLBr_01488|M.leprae_Br4923 ------MSPFGRVSATLPVFPWDTLADAKAVAES-HPDGIVDLSVGTPVD MSMEG_5121|M.smegmatis_MC2_155 ------MVRQ-RRSATLPEFPWDTLADVTALARS-HPDGIVDLSVGTPVD * :.:: . Mb2256c|M.bovis_AF2122/97 RPPEWLVRQLAALLPELARYPS------TDDVHRAQDAVAERHGRTRDEV Rv2231c|M.tuberculosis_H37Rv RPPEWLVRQLAALLPELARYPS------TDDVHRAQDAVAERHGRTRDEV MMAR_3307|M.marinum_M HPPHWLVELLAQRLTTLARYPS------IEDTQRAQDAAALRHRRTRAEV MUL_1321|M.ulcerans_Agy99 HPPHWLVELLAQRLTTLARYPS------IEDTQCAQDAAALRHRRTRAEV MAV_2208|M.avium_104 RPPQWLLDRLAARLPDLARYPG------DDDVHRAQDAAAERHGRRRDEV MAB_1902|M.abscessus_ATCC_1997 APPPWLRDRLASRLDELGSYPR------REDEQRAVDAVAERHGRPPDEV Mflv_1195|M.gilvum_PYR-GCK GPLPSVRAAIADAVGGINRYPDNGYVDLNERLAKYVGFAPENISVGCGSV Mvan_5611|M.vanbaalenii_PYR-1 GPLPSVRAAIEKAIDGINRYPDNGYVELRERLAKHVNFAPEYISVGCGSV TH_1662|M.thermoresistible__bu PPLPSVREAIARAGETLNRYPDNGYLDLRDRLARHVGFAPEHISVGCGSV MLBr_01488|M.leprae_Br4923 PVAPLIQEALAAASSVAGYPTTAGTARLREAAVAALDRRYGITGLTEAAV MSMEG_5121|M.smegmatis_MC2_155 PVAPVIRDALAAGSSSPGYPTTAGTPELREAMVRALDRRYGITGLTPQTV : : . : . * Mb2256c|M.bovis_AF2122/97 LPLVGAAEGFALLHN--LSPVRAAIVVPAFTEPAIALSAAGITAHHVVLK Rv2231c|M.tuberculosis_H37Rv LPLVGAAEGFALLHN--LSPVRAAIVVPAFTEPAIALSAAGITAHHVVLK MMAR_3307|M.marinum_M LPLAGAAEGFALLSN--LRPVRAAIIAPSFTEPAAALSAAGIPVHHVVLA MUL_1321|M.ulcerans_Agy99 LPLAGAAEGFALLSN--LRPVRAAIIAPSFTEPAAALSAAGIPVHHVVLA MAV_2208|M.avium_104 LPLAGAAEAFALLSN--LRPKRAAVIAPSFTEPAAALSAAGVPVHHVVLE MAB_1902|M.abscessus_ATCC_1997 LLLAGAAEGFAMLPR--LNPRRAAVVAPGFTEPEAVLADAGIPLEHVVLP Mflv_1195|M.gilvum_PYR-GCK SLCQQLIQITATVGDEVLFGWRSFEIYPLQVRTAGATPVQVPLT-DHTFD Mvan_5611|M.vanbaalenii_PYR-1 SLCQQLIQITSTVGDEVLFGWRSFEIYPLQVRTAGATPVQVPLT-DHTFD TH_1662|M.thermoresistible__bu SLCQQLVQITAGAGDEVLFGWRSFEIYPLQVRTAGAVPVQVPLT-DHTFD MLBr_01488|M.leprae_Br4923 LPVIGTKELIAWLP--TLLGLRAGDVVVVPELAYPTYNVGARLAGARVLR MSMEG_5121|M.smegmatis_MC2_155 LPVIGTKELIAWLP--TLLGLGSDDVVVVPELAYPTYEVGARLAGAQVLR : : * : : . . .: Mb2256c|M.bovis_AF2122/97 PPFVL-DTAHVPDDADLVVVGNPTNPTSVLHLREQLLELRRPGR----IL Rv2231c|M.tuberculosis_H37Rv PPFVL-DTAHVPDDADLVVVGNPTNPTSVLHLREQLLELRRPGR----IL MMAR_3307|M.marinum_M PPFRL-DEAAVPDDADLVVVGNPTNPTSVLHSREQLLALRRPGR----IL MUL_1321|M.ulcerans_Agy99 PPFRL-DEAAVPDDADLVVVGNPTNPTSVLHSREQLLALRRPGR----IL MAV_2208|M.avium_104 PPFGL-HGAAVPEEADLVVVGNPTNPTAVLHGREQLLALRRPGR----LL MAB_1902|M.abscessus_ATCC_1997 PPFTLGDTVRVPDEADLVVVGNPTNPTGVLHTREQLLALRRPGR----IL Mflv_1195|M.gilvum_PYR-GCK LDAML---AAITDRTRLIFVCNPNNPSSTVVDPGALARFVAAVP-PHILV Mvan_5611|M.vanbaalenii_PYR-1 LDAML---AAITDRTRLIFVCNPNNPTSTVVDPDALARFVEAVP-PHIMV TH_1662|M.thermoresistible__bu LDAIL---AAITDRTRLIFICNPNNPTSTVVDPDALARFVAAVP-EHILI MLBr_01488|M.leprae_Br4923 ADSLT---QLGLQSPALFYLNSPSNPTGQVLAVNHLRKMVGWARNRGVVV MSMEG_5121|M.smegmatis_MC2_155 ADSLT---QIGPQVPALIYLNSPSNPTGRVLGRDHLRKVVTWARERGVLV : . *. : .*.**:. : * . :: Mb2256c|M.bovis_AF2122/97 VVDEAFADWVPGEPQS------LADDSLPDVLVLRSLTKTWSLAGLRVGY Rv2231c|M.tuberculosis_H37Rv VVDEAFADWVPGEPQS------LADDSLPDVLVLRSLTKTWSLAGLRVGY MMAR_3307|M.marinum_M VVDEAFADAVPGEPQS------LAGNCLPDVLVLRSLTKTWSLAGLRVGY MUL_1321|M.ulcerans_Agy99 VVDEAFADAVPGEPQS------LAGDCLPDVLVLRSLTKTWSLAGLRVGY MAV_2208|M.avium_104 VVDEAFADAIPGEPQS------LAGDALPDVLVLRSLTKTWALAGLRVGY MAB_1902|M.abscessus_ATCC_1997 VVDEAFIDAVPGEPES------VASLSLPGLVVLRSLTKTWALAGLRAGY Mflv_1195|M.gilvum_PYR-GCK VLDEAYIEYVRGDLVPDSFG---LVRAHSNVVVLRTFSKAYGLAGLRIGY Mvan_5611|M.vanbaalenii_PYR-1 VVDEAYVEYIRDGLAPDSFG---LVRAHSNVVVLRTFSKAYGLAGLRIGY TH_1662|M.thermoresistible__bu ALDEAYIEYVRPPFVPDSLG---LVRAHDNVVVLRTFSKAYGLAGLRVGY MLBr_01488|M.leprae_Br4923 VSDECYLGLGWDAEPFSVLHPLVCDGNHTGLLAVHSLSKSSSLAGYRAGF MSMEG_5121|M.smegmatis_MC2_155 ASDECYLGLSWDADPVSVLHPSVCDGDHTGLLAIHSLSKTSSLAGYRAGF . **.: .::.:::::*: .*** * *: Mb2256c|M.bovis_AF2122/97 ALGSPDVLARLTVQRAHWPLGTLQLTAIAACCAPRAVAAAAADAVRLTAL Rv2231c|M.tuberculosis_H37Rv ALGSPDVLARLTVQRAHWPLGTLQLTAIAACCAPRAVAAAAADAVRLTAL MMAR_3307|M.marinum_M ALGAPDLLDRLTRMRAHWPVGTLPLTAIAACCTPEAVAEAAADARLLLAA MUL_1321|M.ulcerans_Agy99 ALGTPDLLDRLTRIRAHWPVGTLPLTAIAACCTPEAVAEAAADARLLLAA MAV_2208|M.avium_104 ALGAPEVLARLTAQRAHWPVGTLQLTALAACCGRRAVADAAAGAERLSRL MAB_1902|M.abscessus_ATCC_1997 AVGDPELLRRLARGRAHWPLGTLQLEALAACNTAQAVGSAVLDAQRLVET Mflv_1195|M.gilvum_PYR-GCK AVADPDIVTALSKV--YVPFTATTVSQAAAIACLDAADELLERTDAVVAE Mvan_5611|M.vanbaalenii_PYR-1 AVADPDIIAALSKV--YVPFTATSVSQAAAIACLDAADELLERTDAVVAE TH_1662|M.thermoresistible__bu AVAAPEIVTALGKV--YVPFSVSTLAQAAAIASLDAADELLARTDEVVAE MLBr_01488|M.leprae_Br4923 VAGDPDLVAELLAVRKHAGMMVPTPVQAAMVAALGDDAHEREQRDRYARR MSMEG_5121|M.smegmatis_MC2_155 VAGDPAVVAELLAVRKHAGMMVPGPIQVAMVAALDDDEHEALQRDRYAQR . . * :: * : . . * Mb2256c|M.bovis_AF2122/97 RAEMVAGLRSVGAEVVDGAAPFVLFN--IADADGLRNYLQSKGIAVRRGD Rv2231c|M.tuberculosis_H37Rv RAEMVAGLRSVGAEVVDGAAPFVLFN--IADADGLRNYLQSKGIAVRRGD MMAR_3307|M.marinum_M RAEMVSGLGSVGASVVDGCAPFVLFG--VPDADELRKRLHQRGIAIRRCD MUL_1321|M.ulcerans_Agy99 RAEMVSGLGSVGASVVDGCAPFVLFS--VPDADELRKRLHQRGIAIRRCD MAV_2208|M.avium_104 REKMAAGLASVGADVLDGRAPFVLFR--MPDAVRVRKLLHDKGIAVRRGD MAB_1902|M.abscessus_ATCC_1997 RHRQAEGLRGLGLAVTEGVAPFLLVA--VPHADLMRKHLKVKNIAVRRCD Mflv_1195|M.gilvum_PYR-GCK RTRVSAALREAGYDLPPSQAN-FVWLPLVGRAQQFAADAADARIIVRP-- Mvan_5611|M.vanbaalenii_PYR-1 RTRVSAALREAGYDLPPSQAN-FVWLPLVGRAQQFAADAANSRVIVRP-- TH_1662|M.thermoresistible__bu RARVTAALRDAGYTVPESGAN-FVWLPLAERTVDFVNSAAEDRLLVRP-- MLBr_01488|M.leprae_Br4923 RDVLLPAVVSAGFTVDHSEAGLYLWASRGEPCRDSVEWFAQRGILVALGE MSMEG_5121|M.smegmatis_MC2_155 RNLLLPAFREAGFTVDHSEAGLYLWATRGEACRDTLRWLAERGILVAPGE * .. * : . * : : : Mb2256c|M.bovis_AF2122/97 TFVGLDARYLRAAVRPEWPVLVAAIAEWAKRG--GRR- Rv2231c|M.tuberculosis_H37Rv TFVGLDARYLRAAVRPEWPVLVAAIAEWAKRG--GRR- MMAR_3307|M.marinum_M TFVGLDDGYLRAAVRPEWPQLVDAIAEVRQAGRSGRRR MUL_1321|M.ulcerans_Agy99 TFVGLDDGYLRAAVRPEWPQLVDAIAEVRQAGRSGRRR MAV_2208|M.avium_104 TFVGLDERYLRAAVRPEWPLLVQAIAEAQR-------- MAB_1902|M.abscessus_ATCC_1997 TFVGLDGDYLRVAVRPEWPELVQAMKEIL--------- Mflv_1195|M.gilvum_PYR-GCK -YGEDGVRVTVASPDENDMFLDFARDWIARP------- Mvan_5611|M.vanbaalenii_PYR-1 -YGEDGVRVTIAAPHENDAFLGFARGWDGLR------- TH_1662|M.thermoresistible__bu -YGTDGVRVTVAAPHENDAFLSFATRWISER------- MLBr_01488|M.leprae_Br4923 FYGPGGCQHVRVALTASDERIAAVVARLS--------- MSMEG_5121|M.smegmatis_MC2_155 FYGPAGDRYVRVALTATDERIQQAAERLAG-------- : . .: : .