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M. abscessus ATCC 19977 MAB_1225 (-)

annotation: ABC transporter permease
coordinates: 1237251 - 1237898
length: 215

MGFVEFVKDRWAVLSFLAYQHMSLVLQTLVVAAMCAVFLGVLIYRSPWGVASGNALAAIGLTIPSYALLG
VLVGVVGIGVSPSVIMLVFFGSLPILRNVLVGLTGVDQTLVESARGMGMSRLATLVRLELPLAWPVIMTG
IRVSAQMLMGTAAIAAFALGPGLGGYIFSGISRMGGANATNSVIAGTVGILILAVILDSVLNVVTRLTTP
RGIRV
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_1225--100% (215)ABC transporter permease
M. abscessus ATCC 19977MAB_1227-2e-3038.76% (209) ABC transporter permease
M. abscessus ATCC 19977MAB_0264-3e-2332.72% (217) osmoprotectant ABC transporter ProZ

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3783cproW3e-2230.96% (197) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. gilvum PYR-GCKMflv_3108-1e-5146.67% (210) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv3757cproW3e-2230.96% (197) osmoprotectant (glycine betaine/carnitine/choline/L-proline)
M. leprae Br4923-----
M. marinum MMMAR_0035-1e-9480.37% (214) ABC transporter permease
M. avium 104MAV_0320-2e-1929.74% (195) ABC transporter, permease protein
M. smegmatis MC2 155MSMEG_2927-2e-9881.40% (215) ABC transporter, permease protein OpuCB
M. thermoresistible (build 8)TH_0698-3e-9376.74% (215) ABC transporter, permease protein OpuCB
M. ulcerans Agy99MUL_0034-8e-9278.97% (214) ABC transporter permease
M. vanbaalenii PYR-1Mvan_5598-3e-2133.00% (203) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


Mb3783c|M.bovis_AF2122/97           -----------MHYLMTHPG---AAWALTVVHLRLSLLPVLIGLMSAVPL
Rv3757c|M.tuberculosis_H37Rv        -----------MHYLMTHPG---AAWALTVVHLRLSLLPVLIGLMSAVPL
MAB_1225|M.abscessus_ATCC_1997      -------MG-FVEFVKDRWA---VLSFLAYQHMSLVLQTLVVAAMCAVFL
MSMEG_2927|M.smegmatis_MC2_155      -------MG-FVEFVQDRWA---VLSFLAYQHMSFVVQTLLIATAAALVV
MMAR_0035|M.marinum_M               MEAATEFMG-LYDFVVDRWS---VLWFLAYQHISLVGQTLILATAIALIL
MUL_0034|M.ulcerans_Agy99           -------MG-LYDFVVDRWS---VLWFLAYQHISLVGQALILATAIALIL
TH_0698|M.thermoresistible__bu      -------MD-FIEFVRERWS---VLSFLAYQHMSLVVQTLLLSTLLAVAV
Mflv_3108|M.gilvum_PYR-GCK          -------MNSLWDYVSTHYQ---QLAFDSYQHVSAVVQSVLLATVIGVAI
MAV_0320|M.avium_104                --MNFVQRAIAYLLSADNWTGPVGLAARILEHLEYTGIAVGASALIAVPV
Mvan_5598|M.vanbaalenii_PYR-1       --MNFLQEALSFIFTAANWGGPAGLSARILEHLQYTVIAVFFSAVIAVPL
                                                     .             *:     .:  .   .: :

Mb3783c|M.bovis_AF2122/97           GLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVA
Rv3757c|M.tuberculosis_H37Rv        GLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVA
MAB_1225|M.abscessus_ATCC_1997      GVLIYRSPWGVASGNALAAIGLTIPSYALLGVLVGVVG---IGVSPSVIM
MSMEG_2927|M.smegmatis_MC2_155      GVLIYRSPWASAIGNTLTSVGLTIPSYALLGVLVAFIG---IGVLPSVIM
MMAR_0035|M.marinum_M               GVLIYNSPLGVAAGNAVTAVGLTIPSYALLGVLVGIVG---LGVLPSVIM
MUL_0034|M.ulcerans_Agy99           GVLIYNSPLRVAAGNAVTAVGLTIPSYALLGVLVGIVG---LGVLPSVIM
TH_0698|M.thermoresistible__bu      GVMLYRSTWGRSLGDSVTSLGLTVPSYALLGVLVGIFG---VGVLPSVVL
Mflv_3108|M.gilvum_PYR-GCK          GVLTYRNSLAANLATATSSVILTVPSFALLGLLIPLFG---LGVIPSVAA
MAV_0320|M.avium_104                GLLIGHTGRGTLLVVGAVNGLRALPTLGVLLFGTLLFG---LGLGPSLVA
Mvan_5598|M.vanbaalenii_PYR-1       GMLIGHTGRGTFVVVTGVNALRALPTLGVLLLGVLLWG---LGLIPPTVA
                                    *::  .                ::*: .:: .   . *   :.       

Mb3783c|M.bovis_AF2122/97           LAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPV
Rv3757c|M.tuberculosis_H37Rv        LAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPV
MAB_1225|M.abscessus_ATCC_1997      LVFFGSLPILRNVLVGLTGVDQTLVESARGMGMSRLATLVRLELPLAWPV
MSMEG_2927|M.smegmatis_MC2_155      LVFFGFLPILRNVLVGLGGVDRALIESARGMGMSRLSTLLRLEIPLAWPV
MMAR_0035|M.marinum_M               LTFFGVFPILRNVVVGLTGVDKGLVESARGMGMSRLTTLVRLELPLAWPV
MUL_0034|M.ulcerans_Agy99           PTFFGVFPILRNVVVGLTGVDKGLVESARGMGMSRLTTLVRLELPLAWPV
TH_0698|M.thermoresistible__bu      LTFFGFLPILRNVLVGLNGVDAGLVESARAMGMSRPATLLRLELPLAWPV
Mflv_3108|M.gilvum_PYR-GCK          LVLYSLLPIIRNTIVGLNAVDPALTDAARGIGLSRLQTLGRVELRLVWPA
MAV_0320|M.avium_104                LMLLGVPALLAGTYAGIANVEPTVVDAARAMGMTESQVLLRVEVPNALPL
Mvan_5598|M.vanbaalenii_PYR-1       LMLLGIPPLLAGTYSGIANVDRDVVDAARAMGMTESRILLRVETPIAMPL
                                            ::  .  .:  *   : ::* .:* :.   : ::*     * 

Mb3783c|M.bovis_AF2122/97           LVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQ----TNKSDQIVAG
Rv3757c|M.tuberculosis_H37Rv        LVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQ----TNKSDQIVAG
MAB_1225|M.abscessus_ATCC_1997      IMTGIRVSAQMLMGTAAIAAFALGPGLGGYIFSGISRMGGANATNSVIAG
MSMEG_2927|M.smegmatis_MC2_155      IMTGVRVSAQMLMGVAAIAAYALGPGLGGYIFSGISRTGGANATNSIVAG
MMAR_0035|M.marinum_M               IMTGVRVSAQMLMGIAAIVAFALGPGLGGYIFSGISRMGGANATNSIVAA
MUL_0034|M.ulcerans_Agy99           IMTGVRVSAQMLMGIAAIVAFALGPGLGGYIFSGISRMGGANATNSIVAA
TH_0698|M.thermoresistible__bu      IMTGVRISAQMLMGIAAIAAFALGPGLGGYIFSGISRMGGANATNSIIVA
Mflv_3108|M.gilvum_PYR-GCK          ILSAMRLSTQMSMGVLAIAAYVKGPGLGNLIFAGLARVGSPTALPMALSG
MAV_0320|M.avium_104                ILGGLRSATLQVVATATVAAYASLGGLGRYLIDGIK----EREFHLALVG
Mvan_5598|M.vanbaalenii_PYR-1       ILGGLRTATLQIVATATVAAYASLGGLGRYLIDGIK----VREFYLALVG
                                    :: .:*  :   :.  :: :     ***  :  *             : .

Mb3783c|M.bovis_AF2122/97           VVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR---
Rv3757c|M.tuberculosis_H37Rv        VVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR---
MAB_1225|M.abscessus_ATCC_1997      TVGILILAVILDSVLNVVTRLTTPRGIRV---------------------
MSMEG_2927|M.smegmatis_MC2_155      TVGILILAVVLDTVLNIITRLTTPRGIRV---------------------
MMAR_0035|M.marinum_M               TIGILILAVILDTVLNLIARLTTPRGIRA---------------------
MUL_0034|M.ulcerans_Agy99           TIGILILAVILDTVLNVIARLTTPREIRA---------------------
TH_0698|M.thermoresistible__bu      TVGILLLAVILDAVLNLVTRLTTPRGIRV---------------------
Mflv_3108|M.gilvum_PYR-GCK          TLLIVILALLLDAALVLLGRLTTSKGIR----------------------
MAV_0320|M.avium_104                ALTVAALALVLDGLLAVAVWASVPGTGRLRRTYRPLPHRLAG--------
Mvan_5598|M.vanbaalenii_PYR-1       ALMVTALALILDAALAFAVWASVPGSGRLHRS-GSMPQPLLGDEVALESR
                                    .: :  **:::*  : .    :..                          

Mb3783c|M.bovis_AF2122/97           ------------------------
Rv3757c|M.tuberculosis_H37Rv        ------------------------
MAB_1225|M.abscessus_ATCC_1997      ------------------------
MSMEG_2927|M.smegmatis_MC2_155      ------------------------
MMAR_0035|M.marinum_M               ------------------------
MUL_0034|M.ulcerans_Agy99           ------------------------
TH_0698|M.thermoresistible__bu      ------------------------
Mflv_3108|M.gilvum_PYR-GCK          ------------------------
MAV_0320|M.avium_104                TSYGR-------------------
Mvan_5598|M.vanbaalenii_PYR-1       SRAGRRPDSEARHERGNPSPTVEA