For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_0451c (-)

annotation: cysteine synthase
coordinates: 454723 - 455823
length: 366

NNNIALSSRRSCTHLGPKFHDPNTLVGNTPVLWVSEPFSGPGTGFWAKLEAHNPNGMKDRPALYMVERAR
ERGDLKPGAMIVESTSGTLGLGLALAGIIYRHPVTLVTDPGLEPIIVQMLTAYGAVVDIVTEPHPIGGWQ
QARKDRVAEILAAEPDSWCPDQYQNPDNVDAYRGVAEELIDQLGTVDTLVCSVGTGGHSSGVGRVLREHN
PNLRLVGVDTIGSTIFGQPASTRLMRGLGSSIYPGNVDYRAFDEAHWVAPNEAVWAARTLAASYHASGGW
SVGAVALVAGWVARTSEPGTRVAAIFPDGPMRYHGTIYDDDYCRSHDLLDRPPAQDPDVIDDPSQRVVDR
WTRLTHVIDPLGRTA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_0451c--100% (366)cysteine synthase
M. abscessus ATCC 19977MAB_1273-0.092.62% (366) cysteine synthase A CysK2
M. abscessus ATCC 19977MAB_1195-1e-2931.53% (314) cystathionine beta-synthase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0871cysK21e-14572.43% (341) cysteine synthase A CysK2
M. gilvum PYR-GCKMflv_0899-1e-14770.85% (343) pyridoxal-5'-phosphate-dependent enzyme, beta subunit
M. tuberculosis H37RvRv0848cysK21e-14672.43% (341) cysteine synthase A CysK2
M. leprae Br4923MLBr_02396cysM23e-3032.80% (311) cystathionine beta-synthase
M. marinum MMMAR_4768cysK21e-14772.81% (342) cysteine synthase a CysK2
M. avium 104MAV_1201-2e-2931.05% (351) cystathionine beta-synthase
M. smegmatis MC2 155MSMEG_5270-3e-3032.91% (313) cystathionine beta-synthase
M. thermoresistible (build 8)TH_1449cysK5e-3534.42% (308) PROBABLE CYSTEINE SYNTHASE A CYSK1 (O-ACETYLSERINE
M. ulcerans Agy99MUL_0203cbs2e-2931.51% (311) cystathionine beta-synthase CBS
M. vanbaalenii PYR-1Mvan_5856-1e-14569.97% (343) pyridoxal-5'-phosphate-dependent enzyme, beta subunit

CLUSTAL 2.0.9 multiple sequence alignment


Mb0871|M.bovis_AF2122/97            ---------------------------------MRSRQTRDRYRLLPEGY
Rv0848|M.tuberculosis_H37Rv         ---------------------------------MRSRQTRDRYRLLPEGY
MMAR_4768|M.marinum_M               MNPNLPLVNAANSAGDNLNISPTTLPGRSHLTSMRPRQTRDRYRVVPEGY
Mflv_0899|M.gilvum_PYR-GCK          ---------------------------------MNHALSIHHAQDTDRFE
Mvan_5856|M.vanbaalenii_PYR-1       ---------------------------------MNHVLSIHHAQLS---E
MAB_0451c|M.abscessus_ATCC_199      ---------------------------------MNNNIALSSRRSCT---
MAV_1201|M.avium_104                --------------------------------------------------
MUL_0203|M.ulcerans_Agy99           --------------------------------------------------
MLBr_02396|M.leprae_Br4923          --------------------------------------------------
MSMEG_5270|M.smegmatis_MC2_155      --------------------------------------------------
TH_1449|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mb0871|M.bovis_AF2122/97            QVTPGRNRHPGTMVGNTPVLWIP-ELSGTSDPDRGFWAKLEGFNPGG-MK
Rv0848|M.tuberculosis_H37Rv         QVTPGRNRHPGTMVGNTPVLWIP-ELSGTSDPDRGFWAKLEGFNPGG-MK
MMAR_4768|M.marinum_M               HPIPGRNRHPGTMVGNTPVLWVSGDASPVGSADRGFWAKLEGFNPGG-MK
Mflv_0899|M.gilvum_PYR-GCK          QLRLGRYERPATMVGQTPVLRIG---APFTAAEHGFWAKLEGFNPGG-MK
Mvan_5856|M.vanbaalenii_PYR-1       QRQLGRYERPATMVGQTPVLRIT---VPFTDADRGFWAKLEGFNPGG-MK
MAB_0451c|M.abscessus_ATCC_199      HLGP-KFHDPNTLVGNTPVLWVS---EPFSGPGTGFWAKLEAHNPNG-MK
MAV_1201|M.avium_104                --MR-IAQHISDLIGGTPLVRLN---SVVPDGAGIVAAKVEYLNPGGSSK
MUL_0203|M.ulcerans_Agy99           --MR-IAQHISDLIGGTPLVRLN---AVVPAGIGTVAAKVEYLNPGGSSK
MLBr_02396|M.leprae_Br4923          --MR-IAQHISDLIGGTPLVRLN---SVVPAGTGVVAAKVEYFNSGGSSK
MSMEG_5270|M.smegmatis_MC2_155      --MR-IARHISELIGNTPLVQLN---SVVPEGAGLVAAKIEYLNPGGSSK
TH_1449|M.thermoresistible__bu      --MGNIYNDVTEIVGRTPLVRLN---RLTEGLDAQVLAKLEFYNPANSVK
                                           .    ::* **:: :             . **:*  *. .  *

Mb0871|M.bovis_AF2122/97            DRPALYMVECARARGDIAPGAAIVESTSGTLGLGLALAGKVYRHPVTLVT
Rv0848|M.tuberculosis_H37Rv         DRPALYMVECARARGDIAPGAAIVESTGGTLGLGLALAGKVYRHPVTLVT
MMAR_4768|M.marinum_M               DRPAMHMVERARARGELAPGAAIVESTSGTLGLGLALAGSVYGHPVTLVT
Mflv_0899|M.gilvum_PYR-GCK          DRPALHMVERARSRGKLVPGARIVESTSGTLGLGLALAGTVYGHPVTLVT
Mvan_5856|M.vanbaalenii_PYR-1       DRPALHMVQRARAAGALKPGARIVESTSGTLGLGLALAGTGYGHPVTLVT
MAB_0451c|M.abscessus_ATCC_199      DRPALYMVERARERGDLKPGAMIVESTSGTLGLGLALAGIIYRHPVTLVT
MAV_1201|M.avium_104                DRIAVRMIDAAEASGALKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVC
MUL_0203|M.ulcerans_Agy99           DRIAIKMIDAAEASGALRPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVC
MLBr_02396|M.leprae_Br4923          DRIAAKMIDAAEASGQLKPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVC
MSMEG_5270|M.smegmatis_MC2_155      DRIALKMIEAAEVSGELKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVC
TH_1449|M.thermoresistible__bu      DRIGVAIVDAAEASGALKPGGTIVEATSGNTGIALAMVGAARGYRVILTM
                                    ** .  ::: *.  * : **. ***.*.*. *:.**:..    :   :. 

Mb0871|M.bovis_AF2122/97            DPGLEPIIARMLTAYGAGVDMGTQPHPVGGWQQARKDRVAQLMAEYPGAW
Rv0848|M.tuberculosis_H37Rv         DPGLEPIIARMLTAYGAGVDMVTQPHPVGGWQQARKDRVAQLMAEYPGAW
MMAR_4768|M.marinum_M               DPGLEPIIARMLTAYGARVDMVTEPHPVGGWQQARKDRVAQLLAADPSAW
Mflv_0899|M.gilvum_PYR-GCK          DPGMEPMIQHMLAAFGAHIELVTEPHPRGGWQQARTERVHEILGTDPQAW
Mvan_5856|M.vanbaalenii_PYR-1       DPGLEPIVARMLTAFGAHIELVVEPHQHGGWQQARRERVQQILSSDPHAW
MAB_0451c|M.abscessus_ATCC_199      DPGLEPIIVQMLTAYGAVVDIVTEPHPIGGWQQARKDRVAEILAAEPDSW
MAV_1201|M.avium_104                PDKVGEDKRNVLMAYGAEVVVCPTAVPPEHPDSYYS-VSDRLVTEIEGAW
MUL_0203|M.ulcerans_Agy99           PDKVSEDKRNVLRAYGAEVVVCPTAVPPEDPDSYYS-VSDRLVREIDGAW
MLBr_02396|M.leprae_Br4923          PDKVSEDKRNVLLAYGAEVVVCPTAVPPDDPDSYYS-VSDRLVAKIDGAW
MSMEG_5270|M.smegmatis_MC2_155      PDKVSEDKRNVLRAYGAEVVVCPTAVPPDHPDSYYS-VSNRLVTEIEGAW
TH_1449|M.thermoresistible__bu      PDTMSVERRVMLRAFGAEIVLTPGAEG---MAGAVA-RAEQILAETENAV
                                       :      :* *:** : :   .               .::     : 

Mb0871|M.bovis_AF2122/97            NPNQYGNPDNVGAYRSLA--LELVAQLGRIDVLVCSVGTGGHSAGVARVL
Rv0848|M.tuberculosis_H37Rv         NPNQYGNPDNVGAYRSLA--LELVAQLGRIDVLVCSVGTGGHSAGVARVL
MMAR_4768|M.marinum_M               NPDQYSNPDNVDAYRPLA--LEMAAQLGRVDVLVCSVGTGGHSSGVARVL
Mflv_0899|M.gilvum_PYR-GCK          HPDQYNNPDNVEAYRGLA--MELIEQLGSVDVLVCSVGTGGHSAGVARVL
Mvan_5856|M.vanbaalenii_PYR-1       HPDQYNNPDNVEAYRGLA--HELIDQLGSVDVLVCSVGTGGHSAGVARVL
MAB_0451c|M.abscessus_ATCC_199      CPDQYQNPDNVDAYRGVA--EELIDQLGTVDTLVCSVGTGGHSSGVGRVL
MAV_1201|M.avium_104                KPDQYANPEGPASHYATTGPEIWADTDGKVTHFVAGIGTGGTITGAGRYL
MUL_0203|M.ulcerans_Agy99           KPDQYANPEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGCYL
MLBr_02396|M.leprae_Br4923          KPDQYANPAGPASHYETTGPEIWADTDGRVTHFVAGIGTGGTITGVGRYL
MSMEG_5270|M.smegmatis_MC2_155      KPDQYSNQMGPESHYETTGPEIWADTEGKITHFVAGVGTGGTITGTGRYL
TH_1449|M.thermoresistible__bu      AAKQFANPANPDIHERTTGEEVWADTDGTVDIFVAGIGTGGTLTGVGRLL
                                     ..*: *  .   :   :         * :  :*..:****  :*..  *

Mb0871|M.bovis_AF2122/97            REFNPD-MRLIGVDTIGS-TIFGQPASNRLMRGLGSSIYPRNVDYRAFDE
Rv0848|M.tuberculosis_H37Rv         REFNPD-MRLIGVDTIGS-TIFGQPASNRLMRGLGSSIYPRNVDYRAFDE
MMAR_4768|M.marinum_M               REFNPA-MRLIGVDTIGS-TIFGQPASSRLMRGLGSSIFPRNVDYSAFNE
Mflv_0899|M.gilvum_PYR-GCK          REYNPG-LRLIGVDTVGS-TIFGQPATTRLMRGLGSSIYPGNVDYAAFNE
Mvan_5856|M.vanbaalenii_PYR-1       RETDPQ-LRLIGVDTVGS-TIFGQPAGARLMRGLGSSIYPGNVDYAAFDE
MAB_0451c|M.abscessus_ATCC_199      REHNPN-LRLVGVDTIGS-TIFGQPASTRLMRGLGSSIYPGNVDYRAFDE
MAV_1201|M.avium_104                KEVSGGRVRVIGADPEGS-VYSGGTGRPYLVEGVGEDFWPQAYDRTVPDE
MUL_0203|M.ulcerans_Agy99           KEVSGGKVRVIGADPEGS-VYSGGTGRPYLVEGVGEDFWPATYDHAVPDE
MLBr_02396|M.leprae_Br4923          KEVSGGLVRIIGADPEGS-VYSGGTGRPYLVEGVGEDFWPAAYDPMVPDQ
MSMEG_5270|M.smegmatis_MC2_155      KEVSGGKVKVIGADPEGS-VYSGGTGRPYLVEGVGEDFWPTAYDPSVPDE
TH_1449|M.thermoresistible__bu      KSRKPG-VKIVGVEPLDSPILNGGQPGPHKIQGIGANFIPEVLDRDVYDE
                                    :. .   ::::*.:. .*    *       :.*:* .: *   *  . ::

Mb0871|M.bovis_AF2122/97            VHWVAPPEAVWACRSLAATHYASGGWSVGAVALVAGWAARNLP-ADTTIA
Rv0848|M.tuberculosis_H37Rv         VHWVAPPEAVWACRSLAATHYASGGWSVGAVALVAGWAARNLP-ADTTIA
MMAR_4768|M.marinum_M               VHWVAPAEAVWACRSMAATHYASGGWSVGAVALVAGWAARTLP-SDITIA
Mflv_0899|M.gilvum_PYR-GCK          VHWVAPADAVWACRTLAATHYASGGWSVGAVAVVAGWAARGSD-PGTTVA
Mvan_5856|M.vanbaalenii_PYR-1       VHWVAPAEAVWACRTLAATHYASGGWSVGAVALVAGWAARNSP-PATTVA
MAB_0451c|M.abscessus_ATCC_199      AHWVAPNEAVWAARTLAASYHASGGWSVGAVALVAGWVARTSE-PGTRVA
MAV_1201|M.avium_104                IIAVSDSDSFNMTRRLAREEAMLVGGSCGMAVVAALRVAEQAG-PDALVV
MUL_0203|M.ulcerans_Agy99           IIAVSDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVAEQAG-PDALVV
MLBr_02396|M.leprae_Br4923          IIAVSDSDSFNMTRRLAREEAMLVGGSCGMAVVAALQVAEEAG-PAALVV
MSMEG_5270|M.smegmatis_MC2_155      IIAVSDADSFEMTRRLAREEALLVGGSCGMAVVAAIEVARKAG-PDAVVV
TH_1449|M.thermoresistible__bu      IIDAGFEDAISVSRALATQEGILGGISAGANVWAALEVAKRPENAGKVIV
                                       ..  ::.   * :*       * * *  . .*  .*.    .   :.

Mb0871|M.bovis_AF2122/97            AVFPDGPQRYFDTIYNDAYCNEHELLGGQ---------------------
Rv0848|M.tuberculosis_H37Rv         AVFPDGPQRYFDTIYNDAYCNEHELLGGQ---------------------
MMAR_4768|M.marinum_M               AVFPDGPQRYFDTVYNDDYCNEHGLLGQR---------------------
Mflv_0899|M.gilvum_PYR-GCK          AIFPDGPQRYFDTIYNDEYCRTHGLLDKA---------------------
Mvan_5856|M.vanbaalenii_PYR-1       AIFPDGPQRYFDTVYNDDYCRAHHLLGGA---------------------
MAB_0451c|M.abscessus_ATCC_199      AIFPDGPMRYHGTIYDDDYCRSHDLLDRP---------------------
MAV_1201|M.avium_104                VLLPDGGRGYMAKIFNDAWMSSYGFLRTRLDGSTDQSRVGDVLRRKSGEL
MUL_0203|M.ulcerans_Agy99           VLLPDGGRGYMSKIFNDAWMSSYGFLRSRLDGRTDTSTVGDVLRRKSGAL
MLBr_02396|M.leprae_Br4923          VLLPDGGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQPIVGDVLRRKSGAL
MSMEG_5270|M.smegmatis_MC2_155      VLLPDGGRGYLSKIFNDAWMSSYGFLRTRLDGSVEKT-VGDVLRGKSGAL
TH_1449|M.thermoresistible__bu      VVIPDFGERYVS--------------------------------------
                                    .::**    *                                        

Mb0871|M.bovis_AF2122/97            ----PPTEPDEIASPLDAVVTRWTRSTTVIDPTQVVS-------------
Rv0848|M.tuberculosis_H37Rv         ----PPTEPDEIASPLDAVVTRWTRSTTVIDPTQVVS-------------
MMAR_4768|M.marinum_M               ----PATEPEVIASPSAAVVQRWTRSATVIDPTQVAA-------------
Mflv_0899|M.gilvum_PYR-GCK          ----PPNEPATIDHPLRHAVKAWTRCPVVVDPTQVVPR------------
Mvan_5856|M.vanbaalenii_PYR-1       ----PPSHPATIADPLAQVATAWSRCTRIVDPTRVMPR------------
MAB_0451c|M.abscessus_ATCC_199      ----PAQDPDVIDDPSQRVVDRWTRLTHVIDPLGRTA-------------
MAV_1201|M.avium_104                PDLVHTHPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSEREL
MUL_0203|M.ulcerans_Agy99           PALVHTHPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSEREL
MLBr_02396|M.leprae_Br4923          PDLVHTHPSETVRDAIGILREYAVSQIPVVGAEPPVMAGEVVGSVSEREL
MSMEG_5270|M.smegmatis_MC2_155      PDLVHTHPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSEREL
TH_1449|M.thermoresistible__bu      -----TALFEHIRD------------------------------------
                                         .     :                                      

Mb0871|M.bovis_AF2122/97            --------------------------------------------------
Rv0848|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_4768|M.marinum_M               --------------------------------------------------
Mflv_0899|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_5856|M.vanbaalenii_PYR-1       --------------------------------------------------
MAB_0451c|M.abscessus_ATCC_199      --------------------------------------------------
MAV_1201|M.avium_104                LSAVFEGRAKLADAVSLHMSPPLPMIGAGESVSAAGKALRDWDALMVVEE
MUL_0203|M.ulcerans_Agy99           LSAVFSGKAKLADAVSQHMSPPLKLIGAGELVGVAGKALRDWDALMVVEE
MLBr_02396|M.leprae_Br4923          LSAVFEGRASLADAVSEHMGPPLRLIGDGELVSVAGEALRDSDALMVVEK
MSMEG_5270|M.smegmatis_MC2_155      LSAVFEGRAKLADAVAEHMSPPLPLIGAGELVSTAAKTLRESDAVMVVED
TH_1449|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mb0871|M.bovis_AF2122/97            ---------------------------
Rv0848|M.tuberculosis_H37Rv         ---------------------------
MMAR_4768|M.marinum_M               ---------------------------
Mflv_0899|M.gilvum_PYR-GCK          ---------------------------
Mvan_5856|M.vanbaalenii_PYR-1       ---------------------------
MAB_0451c|M.abscessus_ATCC_199      ---------------------------
MAV_1201|M.avium_104                GKPVGVITRYDLLGFLSEGPRGSGGRR
MUL_0203|M.ulcerans_Agy99           GKPVGVITRYDLLGFLSEG----ALRR
MLBr_02396|M.leprae_Br4923          GKLVGVITRYDLLGFLSEG----APLR
MSMEG_5270|M.smegmatis_MC2_155      GKPVGVLTRHDLLGFLSEG----GYRH
TH_1449|M.thermoresistible__bu      ---------------------------