For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. ulcerans Agy99 MUL_0203 (cbs)

annotation: cystathionine beta-synthase CBS
coordinates: 205748 - 207142
length: 464

RIAQHISDLIGGTPLVRLNAVVPAGIGTVAAKVEYLNPGGSSKDRIAIKMIDAAEASGALRPGGTIVEPT
SGNTGVGLALVAQHRGYKCVFVCPDKVSEDKRNVLRAYGAEVVVCPTAVPPEDPDSYYSVSDRLVREIDG
AWKPDQYANPEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGCYLKEVSGGKVRVIGADPEGS
VYSGGTGRPYLVEGVGEDFWPATYDHAVPDEIIAVSDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVA
EQAGPDALVVVLLPDGGRGYMSKIFNDAWMSSYGFLRSRLDGRTDTSTVGDVLRRKSGALPALVHTHPSE
TVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVFSGKAKLADAVSQHMSPPLKLIGAGE
LVGVAGKALRDWDALMVVEEGKPVGVITRYDLLGFLSEGALRR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_0203cbs-100% (464)cystathionine beta-synthase CBS
M. ulcerans Agy99MUL_1465cysK13e-6945.95% (309) cysteine synthase a CysK1
M. ulcerans Agy99MUL_0242cysM2e-4236.33% (300) cysteine synthase B CysM

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1106cbs0.091.81% (464) cystathionine beta-synthase CBS (Serine sulfhydrase)
M. gilvum PYR-GCKMflv_2043-0.085.90% (461) cystathionine beta-synthase
M. tuberculosis H37RvRv1077cbs0.091.81% (464) cystathionine beta-synthase CBS (Serine sulfhydrase)
M. leprae Br4923MLBr_02396cysM20.089.37% (461) cystathionine beta-synthase
M. abscessus ATCC 19977MAB_1195-0.083.62% (464) cystathionine beta-synthase
M. marinum MMMAR_4390cbs0.099.14% (464) cystathionine beta-synthase CBS
M. avium 104MAV_1201-0.092.17% (460) cystathionine beta-synthase
M. smegmatis MC2 155MSMEG_5270-0.085.31% (463) cystathionine beta-synthase
M. thermoresistible (build 8)TH_1371-0.080.99% (463) cystathionine beta-synthase
M. vanbaalenii PYR-1Mvan_4674-0.086.21% (464) cystathionine beta-synthase

CLUSTAL 2.0.9 multiple sequence alignment


MUL_0203|M.ulcerans_Agy99           MRIAQHISDLIGGTPLVRLNAVVPAGIGTVAAKVEYLNPGGSSKDRIAIK
MMAR_4390|M.marinum_M               MRIAQHISDLIGGTPLVRLNAVVPAGIGTVAAKVEYLNPGGSSKDRIAIK
MAV_1201|M.avium_104                MRIAQHISDLIGGTPLVRLNSVVPDGAGIVAAKVEYLNPGGSSKDRIAVR
Mb1106|M.bovis_AF2122/97            MRIAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVK
Rv1077|M.tuberculosis_H37Rv         MRIAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVK
MLBr_02396|M.leprae_Br4923          MRIAQHISDLIGGTPLVRLNSVVPAGTGVVAAKVEYFNSGGSSKDRIAAK
Mflv_2043|M.gilvum_PYR-GCK          MRIARHISELIGNTPLVQLNSVVPPGAGTVVAKVEYLNPGGSSKDRIAIK
Mvan_4674|M.vanbaalenii_PYR-1       MRIARHISELIGNTPLVQLNSVVPPGAGTVAAKIEYLNPGGSSKDRIAIK
MSMEG_5270|M.smegmatis_MC2_155      MRIARHISELIGNTPLVQLNSVVPEGAGLVAAKIEYLNPGGSSKDRIALK
TH_1371|M.thermoresistible__bu      MRYARHVSELIGNTPLVQLNSVVPEGAGMVLAKIEYLNPGGSSKDRIAVK
MAB_1195|M.abscessus_ATCC_1997      MRIAQHVSDLIGNTPLVRLNSVVPEGCATVAAKIEYLNPGGSSKDRIAVK
                                    ** *:*:*:***.****:**:*** * . * **:**:*.********* :

MUL_0203|M.ulcerans_Agy99           MIDAAEASGALRPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE
MMAR_4390|M.marinum_M               MIDAAEASGALRPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE
MAV_1201|M.avium_104                MIDAAEASGALKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVCPDKVGE
Mb1106|M.bovis_AF2122/97            MIEAAEASGQLKPGGTIVEPTSGNTGVGLALVAQRRGYKCVFVCPDKVSE
Rv1077|M.tuberculosis_H37Rv         MIEAAEASGQLKPGGTIVEPTSGNTGVGLALVAQRRGYKCVFVCPDKVSE
MLBr_02396|M.leprae_Br4923          MIDAAEASGQLKPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE
Mflv_2043|M.gilvum_PYR-GCK          MIDAAEASGELKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE
Mvan_4674|M.vanbaalenii_PYR-1       MIDAAEASGELKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE
MSMEG_5270|M.smegmatis_MC2_155      MIEAAEVSGELKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVCPDKVSE
TH_1371|M.thermoresistible__bu      MIEDAEKRGLLKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE
MAB_1195|M.abscessus_ATCC_1997      MIEAAEEAGLLKPGGTIVEPTSGNTGVGLALVAQRKGYHCVFVCPDKVSE
                                    **: **  * *:******************:***::**:*:*******.*

MUL_0203|M.ulcerans_Agy99           DKRNVLRAYGAEVVVCPTAVPPEDPDSYYSVSDRLVREIDGAWKPDQYAN
MMAR_4390|M.marinum_M               DKRNVLRAYGAEVVVCPTAVPPEDPDSYYSVSDRLVREIDGAWKPDQYAN
MAV_1201|M.avium_104                DKRNVLMAYGAEVVVCPTAVPPEHPDSYYSVSDRLVTEIEGAWKPDQYAN
Mb1106|M.bovis_AF2122/97            DKRNVLIAYGAEVVVCPTAVPPHDPASYYSVSDRLVRDIDGAWKPDQYAN
Rv1077|M.tuberculosis_H37Rv         DKRNVLIAYGAEVVVCPTAVPPHDPASYYSVSDRLVRDIDGAWKPDQYAN
MLBr_02396|M.leprae_Br4923          DKRNVLLAYGAEVVVCPTAVPPDDPDSYYSVSDRLVAKIDGAWKPDQYAN
Mflv_2043|M.gilvum_PYR-GCK          DKQNVLRAYGAEVVVCPTAVAPDDPASYYSVSNRLVSEIDGAWKPDQYSN
Mvan_4674|M.vanbaalenii_PYR-1       DKQNVLRAYGADVVVCPTAVAPEDPASYYSVSNRLVEEIDGAWKPDQYSN
MSMEG_5270|M.smegmatis_MC2_155      DKRNVLRAYGAEVVVCPTAVPPDHPDSYYSVSNRLVTEIEGAWKPDQYSN
TH_1371|M.thermoresistible__bu      DKQNVLRAYGAEVVVCPTAVPPEHPDSYYSVSDRLTREIDGAWKPDQYSN
MAB_1195|M.abscessus_ATCC_1997      DKRNVLRAYGAEVVVCPTAVPPEHPDSYYNVSDRLVREIEGAWKPDQYSN
                                    **:*** ****:********.*..* ***.**:**. .*:********:*

MUL_0203|M.ulcerans_Agy99           PEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGCYLKEVSG--
MMAR_4390|M.marinum_M               PEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGRYLKEVSG--
MAV_1201|M.avium_104                PEGPASHYATTGPEIWADTDGKVTHFVAGIGTGGTITGAGRYLKEVSG--
Mb1106|M.bovis_AF2122/97            PEGPASHYVTTGPEIWADTEGKVTHFVAGIGTGGTITGAGRYLKEVSG--
Rv1077|M.tuberculosis_H37Rv         PEGPASHYVTTGPEIWADTEGKVTHFVAGIGTGGTITGAGRYLKEVSG--
MLBr_02396|M.leprae_Br4923          PAGPASHYETTGPEIWADTDGRVTHFVAGIGTGGTITGVGRYLKEVSG--
Mflv_2043|M.gilvum_PYR-GCK          PMGPESHYETTGPEIWADTDGKITHFVAGVGTGGTITGAGRYLKEVSG--
Mvan_4674|M.vanbaalenii_PYR-1       PMGPESHYETTGPEIWADTDGKVTHFVAGVGTGGTITGAGRYLKEVSG--
MSMEG_5270|M.smegmatis_MC2_155      QMGPESHYETTGPEIWADTEGKITHFVAGVGTGGTITGTGRYLKEVSG--
TH_1371|M.thermoresistible__bu      QMGPQSHYETTGPEIWNDTDGKVTHFVAGVGTGGTITGAGRYLKEVSGRR
MAB_1195|M.abscessus_ATCC_1997      PNGPASHYETTGPEIWADTDGKITHFVAGVGTGGTITGAGRYLKEVSGGR
                                      ** *** ******* **:*::******:********.* *******  

MUL_0203|M.ulcerans_Agy99           --GKVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPATYDHAVPDEIIAV
MMAR_4390|M.marinum_M               --GKVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPAVPDEIIAV
MAV_1201|M.avium_104                --GRVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPQAYDRTVPDEIIAV
Mb1106|M.bovis_AF2122/97            --GRVRIVGADPEGSVYSGGAGRPYLVEGVGEDFWPAAYDPSVPDEIIAV
Rv1077|M.tuberculosis_H37Rv         --GRVRIVGADPEGSVYSGGAGRPYLVEGVGEDFWPAAYDPSVPDEIIAV
MLBr_02396|M.leprae_Br4923          --GLVRIIGADPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPMVPDQIIAV
Mflv_2043|M.gilvum_PYR-GCK          --GRVKVIGADPEGSVYSGGTGRPYLVEGVGEDFWPSAYDPSVPDEIIAV
Mvan_4674|M.vanbaalenii_PYR-1       --GRVKVIGVDPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPSVPDEIIAV
MSMEG_5270|M.smegmatis_MC2_155      --GKVKVIGADPEGSVYSGGTGRPYLVEGVGEDFWPTAYDPSVPDEIIAV
TH_1371|M.thermoresistible__bu      PEGPVRVVGADPEGSVYSGGTGRPYLVEGVGEDFWPSVYDPSVPDEIIAV
MAB_1195|M.abscessus_ATCC_1997      AIGEVKIVGADPEGSVYSGGTGRPYLVEGVGEDFWPSAYDPSVVDEVIAV
                                      * *:::*.**********:*************** .**  * *::***

MUL_0203|M.ulcerans_Agy99           SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD
MMAR_4390|M.marinum_M               SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD
MAV_1201|M.avium_104                SDSDSFNMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD
Mb1106|M.bovis_AF2122/97            SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALKVAEEAGPDALIVVLLPD
Rv1077|M.tuberculosis_H37Rv         SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALKVAEEAGPDALIVVLLPD
MLBr_02396|M.leprae_Br4923          SDSDSFNMTRRLAREEAMLVGGSCGMAVVAALQVAEEAGPAALVVVLLPD
Mflv_2043|M.gilvum_PYR-GCK          SDADSFDMTRRLAREEALLVGGSCGMAAVAAIRVAEREGPDALVVVLLPD
Mvan_4674|M.vanbaalenii_PYR-1       SDADSFDMTRRLAREEALLVGGSCGMAAVAAIKVAEREGPDALVVVLLPD
MSMEG_5270|M.smegmatis_MC2_155      SDADSFEMTRRLAREEALLVGGSCGMAVVAAIEVARKAGPDAVVVVLLPD
TH_1371|M.thermoresistible__bu      SDADSFEMTRRLAREEGLLVGGSCGMAVVAANKVALEAGPDAVVVVLLPD
MAB_1195|M.abscessus_ATCC_1997      SDADSFEMTRRLAREEGLLVGGSCGMAVVAAIRLAEKVGPDGLVVVLLPD
                                    **:***:*********.:*********.*** .:* . ** .::******

MUL_0203|M.ulcerans_Agy99           GGRGYMSKIFNDAWMSSYGFLRSRLDGRTDTSTVGDVLRRKSGALPALVH
MMAR_4390|M.marinum_M               GGRGYMSKIFNDAWMSSYGFLRSRLDGRTDASTVGDVLRRKSGALPALVH
MAV_1201|M.avium_104                GGRGYMAKIFNDAWMSSYGFLRTRLDGSTDQSRVGDVLRRKSGELPDLVH
Mb1106|M.bovis_AF2122/97            GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQSTVGDVLRRKSGALPALVH
Rv1077|M.tuberculosis_H37Rv         GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQSTVGDVLRRKSGALPALVH
MLBr_02396|M.leprae_Br4923          GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQPIVGDVLRRKSGALPDLVH
Mflv_2043|M.gilvum_PYR-GCK          GGRGYLSKIFNDGWMSSYGFLRTRLDGSVQESTVGDVLRGKSGALPALVH
Mvan_4674|M.vanbaalenii_PYR-1       GGRGYLSKIFNDAWMSSYGFLRSRLDGSVEESTVGDVLRGKSGALPDLVH
MSMEG_5270|M.smegmatis_MC2_155      GGRGYLSKIFNDAWMSSYGFLRTRLDGSVEK-TVGDVLRGKSGALPDLVH
TH_1371|M.thermoresistible__bu      GGRGYLSKIFNDEWMSSYGFLRTPLDGKVHQPTVGDVLRGKSGELPDLVH
MAB_1195|M.abscessus_ATCC_1997      GGRGYLSKVFNDAWMSSYGFLRSRLDGSVSEPTVGDVLRGKSGALPDLVH
                                    *****::*:*** *********: *** .    ****** *** ** ***

MUL_0203|M.ulcerans_Agy99           THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
MMAR_4390|M.marinum_M               THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
MAV_1201|M.avium_104                THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
Mb1106|M.bovis_AF2122/97            THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
Rv1077|M.tuberculosis_H37Rv         THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
MLBr_02396|M.leprae_Br4923          THPSETVRDAIGILREYAVSQIPVVGAEPPVMAGEVVGSVSERELLSAVF
Mflv_2043|M.gilvum_PYR-GCK          THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERDLVSAVF
Mvan_4674|M.vanbaalenii_PYR-1       THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
MSMEG_5270|M.smegmatis_MC2_155      THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
TH_1371|M.thermoresistible__bu      THPSETIRDAINILREYGVSQMPVVGAEPPVMAGEVAGSVTERELLSAVY
MAB_1195|M.abscessus_ATCC_1997      THPSETVRDAIEILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF
                                    ******:**** *****.***:**************.***:**:*:***:

MUL_0203|M.ulcerans_Agy99           SGKAKLADAVSQHMSPPLKLIGAGELVGVAGKALRDWDALMVVEEGKPVG
MMAR_4390|M.marinum_M               SGKAKLADAVSQHMSPPLKLIGAGELVGVAGKALRDWDALMVVEEGKPVG
MAV_1201|M.avium_104                EGRAKLADAVSLHMSPPLPMIGAGESVSAAGKALRDWDALMVVEEGKPVG
Mb1106|M.bovis_AF2122/97            EGRAKLADAVSAHMSPPLRMIGAGELVSAAGKALRDWDALMVVEEGKPVG
Rv1077|M.tuberculosis_H37Rv         EGRAKLADAVSAHMSPPLRMIGAGELVSAAGKALRDWDALMVVEEGKPVG
MLBr_02396|M.leprae_Br4923          EGRASLADAVSEHMGPPLRLIGDGELVSVAGEALRDSDALMVVEKGKLVG
Mflv_2043|M.gilvum_PYR-GCK          EGRAKLADAVAQHMSPPLPLIGAGELVSAAAKTLRECDAVMVVEEGKPAG
Mvan_4674|M.vanbaalenii_PYR-1       EGRAKLADAVADHMGPPLPLIGVGELVSTAAKALRESDAVMVVEEGKPVG
MSMEG_5270|M.smegmatis_MC2_155      EGRAKLADAVAEHMSPPLPLIGAGELVSTAAKTLRESDAVMVVEDGKPVG
TH_1371|M.thermoresistible__bu      EGRAKLTDAVAEHMGAPLPLIGAGEPVQAAAKMLRECDAVMVVEEGKPAG
MAB_1195|M.abscessus_ATCC_1997      EGRAQLADAVAQHMSPPLPLVGSGEPLSTAGSMLRDTDAVMVVDEGKPVG
                                    .*:*.*:***: **..** ::* ** : .*.. **: **:***:.** .*

MUL_0203|M.ulcerans_Agy99           VITRYDLLGFLSEG----ALRR
MMAR_4390|M.marinum_M               VITRYDLLGFLSEG----ALRR
MAV_1201|M.avium_104                VITRYDLLGFLSEGPRGSGGRR
Mb1106|M.bovis_AF2122/97            VITRYDLLGFLSEG----AGRR
Rv1077|M.tuberculosis_H37Rv         VITRYDLLGFLSEG----AGRR
MLBr_02396|M.leprae_Br4923          VITRYDLLGFLSEG----APLR
Mflv_2043|M.gilvum_PYR-GCK          VLTRHDLLGYLSDS----SPGH
Mvan_4674|M.vanbaalenii_PYR-1       VLTRHDLLGYLSEG----NARR
MSMEG_5270|M.smegmatis_MC2_155      VLTRHDLLGFLSEG----GYRH
TH_1371|M.thermoresistible__bu      VLTRHDLLGFLSES----TAAH
MAB_1195|M.abscessus_ATCC_1997      VITRHDLLGFVSSGR---GVRH
                                    *:**:****::*..       :