For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RIAQHISDLIGGTPLVRLNSVVPAGTGVVAAKVEYFNSGGSSKDRIAAKMIDAAEASGQLKPGGTIVEPT SGNTGVGLALVAQHRGYKCVFVCPDKVSEDKRNVLLAYGAEVVVCPTAVPPDDPDSYYSVSDRLVAKIDG AWKPDQYANPAGPASHYETTGPEIWADTDGRVTHFVAGIGTGGTITGVGRYLKEVSGGLVRIIGADPEGS VYSGGTGRPYLVEGVGEDFWPAAYDPMVPDQIIAVSDSDSFNMTRRLAREEAMLVGGSCGMAVVAALQVA EEAGPAALVVVLLPDGGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQPIVGDVLRRKSGALPDLVHTHPSE TVRDAIGILREYAVSQIPVVGAEPPVMAGEVVGSVSERELLSAVFEGRASLADAVSEHMGPPLRLIGDGE LVSVAGEALRDSDALMVVEKGKLVGVITRYDLLGFLSEGAPLR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_02396 | cysM2 | - | 100% (464) | cystathionine beta-synthase |
M. leprae Br4923 | MLBr_00839 | cysK | 1e-65 | 44.26% (305) | putative cysteine synthase |
M. leprae Br4923 | MLBr_01130 | thrC | 2e-05 | 22.65% (309) | threonine synthase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1106 | cbs | 0.0 | 90.09% (464) | cystathionine beta-synthase CBS (Serine sulfhydrase) |
M. gilvum PYR-GCK | Mflv_2043 | - | 0.0 | 82.47% (462) | cystathionine beta-synthase |
M. tuberculosis H37Rv | Rv1077 | cbs | 0.0 | 90.09% (464) | cystathionine beta-synthase CBS (Serine sulfhydrase) |
M. abscessus ATCC 19977 | MAB_1195 | - | 0.0 | 81.41% (468) | cystathionine beta-synthase |
M. marinum M | MMAR_4390 | cbs | 0.0 | 90.02% (461) | cystathionine beta-synthase CBS |
M. avium 104 | MAV_1201 | - | 0.0 | 89.13% (460) | cystathionine beta-synthase |
M. smegmatis MC2 155 | MSMEG_5270 | - | 0.0 | 84.78% (460) | cystathionine beta-synthase |
M. thermoresistible (build 8) | TH_1371 | - | 0.0 | 79.70% (463) | cystathionine beta-synthase |
M. ulcerans Agy99 | MUL_0203 | cbs | 0.0 | 89.37% (461) | cystathionine beta-synthase CBS |
M. vanbaalenii PYR-1 | Mvan_4674 | - | 0.0 | 85.00% (460) | cystathionine beta-synthase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1106|M.bovis_AF2122/97 MRIAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVK Rv1077|M.tuberculosis_H37Rv MRIAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVK MLBr_02396|M.leprae_Br4923 MRIAQHISDLIGGTPLVRLNSVVPAGTGVVAAKVEYFNSGGSSKDRIAAK MMAR_4390|M.marinum_M MRIAQHISDLIGGTPLVRLNAVVPAGIGTVAAKVEYLNPGGSSKDRIAIK MUL_0203|M.ulcerans_Agy99 MRIAQHISDLIGGTPLVRLNAVVPAGIGTVAAKVEYLNPGGSSKDRIAIK MAV_1201|M.avium_104 MRIAQHISDLIGGTPLVRLNSVVPDGAGIVAAKVEYLNPGGSSKDRIAVR Mflv_2043|M.gilvum_PYR-GCK MRIARHISELIGNTPLVQLNSVVPPGAGTVVAKVEYLNPGGSSKDRIAIK Mvan_4674|M.vanbaalenii_PYR-1 MRIARHISELIGNTPLVQLNSVVPPGAGTVAAKIEYLNPGGSSKDRIAIK MSMEG_5270|M.smegmatis_MC2_155 MRIARHISELIGNTPLVQLNSVVPEGAGLVAAKIEYLNPGGSSKDRIALK TH_1371|M.thermoresistible__bu MRYARHVSELIGNTPLVQLNSVVPEGAGMVLAKIEYLNPGGSSKDRIAVK MAB_1195|M.abscessus_ATCC_1997 MRIAQHVSDLIGNTPLVRLNSVVPEGCATVAAKIEYLNPGGSSKDRIAVK ** *:*:*:***.****:**:*** * . * **:**:*.********* : Mb1106|M.bovis_AF2122/97 MIEAAEASGQLKPGGTIVEPTSGNTGVGLALVAQRRGYKCVFVCPDKVSE Rv1077|M.tuberculosis_H37Rv MIEAAEASGQLKPGGTIVEPTSGNTGVGLALVAQRRGYKCVFVCPDKVSE MLBr_02396|M.leprae_Br4923 MIDAAEASGQLKPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE MMAR_4390|M.marinum_M MIDAAEASGALRPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE MUL_0203|M.ulcerans_Agy99 MIDAAEASGALRPGGTIVEPTSGNTGVGLALVAQHRGYKCVFVCPDKVSE MAV_1201|M.avium_104 MIDAAEASGALKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVCPDKVGE Mflv_2043|M.gilvum_PYR-GCK MIDAAEASGELKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE Mvan_4674|M.vanbaalenii_PYR-1 MIDAAEASGELKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE MSMEG_5270|M.smegmatis_MC2_155 MIEAAEVSGELKPGGTIVEPTSGNTGVGLALVAQQRGYKCVFVCPDKVSE TH_1371|M.thermoresistible__bu MIEDAEKRGLLKPGGTIVEPTSGNTGVGLAIVAQQRGYKCIFVCPDKVSE MAB_1195|M.abscessus_ATCC_1997 MIEAAEEAGLLKPGGTIVEPTSGNTGVGLALVAQRKGYHCVFVCPDKVSE **: ** * *:******************:***::**:*:*******.* Mb1106|M.bovis_AF2122/97 DKRNVLIAYGAEVVVCPTAVPPHDPASYYSVSDRLVRDIDGAWKPDQYAN Rv1077|M.tuberculosis_H37Rv DKRNVLIAYGAEVVVCPTAVPPHDPASYYSVSDRLVRDIDGAWKPDQYAN MLBr_02396|M.leprae_Br4923 DKRNVLLAYGAEVVVCPTAVPPDDPDSYYSVSDRLVAKIDGAWKPDQYAN MMAR_4390|M.marinum_M DKRNVLRAYGAEVVVCPTAVPPEDPDSYYSVSDRLVREIDGAWKPDQYAN MUL_0203|M.ulcerans_Agy99 DKRNVLRAYGAEVVVCPTAVPPEDPDSYYSVSDRLVREIDGAWKPDQYAN MAV_1201|M.avium_104 DKRNVLMAYGAEVVVCPTAVPPEHPDSYYSVSDRLVTEIEGAWKPDQYAN Mflv_2043|M.gilvum_PYR-GCK DKQNVLRAYGAEVVVCPTAVAPDDPASYYSVSNRLVSEIDGAWKPDQYSN Mvan_4674|M.vanbaalenii_PYR-1 DKQNVLRAYGADVVVCPTAVAPEDPASYYSVSNRLVEEIDGAWKPDQYSN MSMEG_5270|M.smegmatis_MC2_155 DKRNVLRAYGAEVVVCPTAVPPDHPDSYYSVSNRLVTEIEGAWKPDQYSN TH_1371|M.thermoresistible__bu DKQNVLRAYGAEVVVCPTAVPPEHPDSYYSVSDRLTREIDGAWKPDQYSN MAB_1195|M.abscessus_ATCC_1997 DKRNVLRAYGAEVVVCPTAVPPEHPDSYYNVSDRLVREIEGAWKPDQYSN **:*** ****:********.*..* ***.**:**. .*:********:* Mb1106|M.bovis_AF2122/97 PEGPASHYVTTGPEIWADTEGKVTHFVAGIGTGGTITGAGRYLKEVSG-- Rv1077|M.tuberculosis_H37Rv PEGPASHYVTTGPEIWADTEGKVTHFVAGIGTGGTITGAGRYLKEVSG-- MLBr_02396|M.leprae_Br4923 PAGPASHYETTGPEIWADTDGRVTHFVAGIGTGGTITGVGRYLKEVSG-- MMAR_4390|M.marinum_M PEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGRYLKEVSG-- MUL_0203|M.ulcerans_Agy99 PEGPASHYATTGPEIWADTDGKITHFVAGIGTGGTITGAGCYLKEVSG-- MAV_1201|M.avium_104 PEGPASHYATTGPEIWADTDGKVTHFVAGIGTGGTITGAGRYLKEVSG-- Mflv_2043|M.gilvum_PYR-GCK PMGPESHYETTGPEIWADTDGKITHFVAGVGTGGTITGAGRYLKEVSG-- Mvan_4674|M.vanbaalenii_PYR-1 PMGPESHYETTGPEIWADTDGKVTHFVAGVGTGGTITGAGRYLKEVSG-- MSMEG_5270|M.smegmatis_MC2_155 QMGPESHYETTGPEIWADTEGKITHFVAGVGTGGTITGTGRYLKEVSG-- TH_1371|M.thermoresistible__bu QMGPQSHYETTGPEIWNDTDGKVTHFVAGVGTGGTITGAGRYLKEVSGRR MAB_1195|M.abscessus_ATCC_1997 PNGPASHYETTGPEIWADTDGKITHFVAGVGTGGTITGAGRYLKEVSGGR ** *** ******* **:*::******:********.* ******* Mb1106|M.bovis_AF2122/97 --GRVRIVGADPEGSVYSGGAGRPYLVEGVGEDFWPAAYDPSVPDEIIAV Rv1077|M.tuberculosis_H37Rv --GRVRIVGADPEGSVYSGGAGRPYLVEGVGEDFWPAAYDPSVPDEIIAV MLBr_02396|M.leprae_Br4923 --GLVRIIGADPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPMVPDQIIAV MMAR_4390|M.marinum_M --GKVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPAVPDEIIAV MUL_0203|M.ulcerans_Agy99 --GKVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPATYDHAVPDEIIAV MAV_1201|M.avium_104 --GRVRVIGADPEGSVYSGGTGRPYLVEGVGEDFWPQAYDRTVPDEIIAV Mflv_2043|M.gilvum_PYR-GCK --GRVKVIGADPEGSVYSGGTGRPYLVEGVGEDFWPSAYDPSVPDEIIAV Mvan_4674|M.vanbaalenii_PYR-1 --GRVKVIGVDPEGSVYSGGTGRPYLVEGVGEDFWPAAYDPSVPDEIIAV MSMEG_5270|M.smegmatis_MC2_155 --GKVKVIGADPEGSVYSGGTGRPYLVEGVGEDFWPTAYDPSVPDEIIAV TH_1371|M.thermoresistible__bu PEGPVRVVGADPEGSVYSGGTGRPYLVEGVGEDFWPSVYDPSVPDEIIAV MAB_1195|M.abscessus_ATCC_1997 AIGEVKIVGADPEGSVYSGGTGRPYLVEGVGEDFWPSAYDPSVVDEVIAV * *:::*.**********:*************** .** * *::*** Mb1106|M.bovis_AF2122/97 SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALKVAEEAGPDALIVVLLPD Rv1077|M.tuberculosis_H37Rv SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALKVAEEAGPDALIVVLLPD MLBr_02396|M.leprae_Br4923 SDSDSFNMTRRLAREEAMLVGGSCGMAVVAALQVAEEAGPAALVVVLLPD MMAR_4390|M.marinum_M SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD MUL_0203|M.ulcerans_Agy99 SDSDSFDMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD MAV_1201|M.avium_104 SDSDSFNMTRRLAREEAMLVGGSCGMAVVAALRVAEQAGPDALVVVLLPD Mflv_2043|M.gilvum_PYR-GCK SDADSFDMTRRLAREEALLVGGSCGMAAVAAIRVAEREGPDALVVVLLPD Mvan_4674|M.vanbaalenii_PYR-1 SDADSFDMTRRLAREEALLVGGSCGMAAVAAIKVAEREGPDALVVVLLPD MSMEG_5270|M.smegmatis_MC2_155 SDADSFEMTRRLAREEALLVGGSCGMAVVAAIEVARKAGPDAVVVVLLPD TH_1371|M.thermoresistible__bu SDADSFEMTRRLAREEGLLVGGSCGMAVVAANKVALEAGPDAVVVVLLPD MAB_1195|M.abscessus_ATCC_1997 SDADSFEMTRRLAREEGLLVGGSCGMAVVAAIRLAEKVGPDGLVVVLLPD **:***:*********.:*********.*** .:* . ** .::****** Mb1106|M.bovis_AF2122/97 GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQSTVGDVLRRKSGALPALVH Rv1077|M.tuberculosis_H37Rv GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQSTVGDVLRRKSGALPALVH MLBr_02396|M.leprae_Br4923 GGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQPIVGDVLRRKSGALPDLVH MMAR_4390|M.marinum_M GGRGYMSKIFNDAWMSSYGFLRSRLDGRTDASTVGDVLRRKSGALPALVH MUL_0203|M.ulcerans_Agy99 GGRGYMSKIFNDAWMSSYGFLRSRLDGRTDTSTVGDVLRRKSGALPALVH MAV_1201|M.avium_104 GGRGYMAKIFNDAWMSSYGFLRTRLDGSTDQSRVGDVLRRKSGELPDLVH Mflv_2043|M.gilvum_PYR-GCK GGRGYLSKIFNDGWMSSYGFLRTRLDGSVQESTVGDVLRGKSGALPALVH Mvan_4674|M.vanbaalenii_PYR-1 GGRGYLSKIFNDAWMSSYGFLRSRLDGSVEESTVGDVLRGKSGALPDLVH MSMEG_5270|M.smegmatis_MC2_155 GGRGYLSKIFNDAWMSSYGFLRTRLDGSVEK-TVGDVLRGKSGALPDLVH TH_1371|M.thermoresistible__bu GGRGYLSKIFNDEWMSSYGFLRTPLDGKVHQPTVGDVLRGKSGELPDLVH MAB_1195|M.abscessus_ATCC_1997 GGRGYLSKVFNDAWMSSYGFLRSRLDGSVSEPTVGDVLRGKSGALPDLVH *****::*:*** *********: *** . ****** *** ** *** Mb1106|M.bovis_AF2122/97 THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF Rv1077|M.tuberculosis_H37Rv THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF MLBr_02396|M.leprae_Br4923 THPSETVRDAIGILREYAVSQIPVVGAEPPVMAGEVVGSVSERELLSAVF MMAR_4390|M.marinum_M THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF MUL_0203|M.ulcerans_Agy99 THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF MAV_1201|M.avium_104 THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF Mflv_2043|M.gilvum_PYR-GCK THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERDLVSAVF Mvan_4674|M.vanbaalenii_PYR-1 THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF MSMEG_5270|M.smegmatis_MC2_155 THPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF TH_1371|M.thermoresistible__bu THPSETIRDAINILREYGVSQMPVVGAEPPVMAGEVAGSVTERELLSAVY MAB_1195|M.abscessus_ATCC_1997 THPSETVRDAIEILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVF ******:**** *****.***:**************.***:**:*:***: Mb1106|M.bovis_AF2122/97 EGRAKLADAVSAHMSPPLRMIGAGELVSAAGKALRDWDALMVVEEGKPVG Rv1077|M.tuberculosis_H37Rv EGRAKLADAVSAHMSPPLRMIGAGELVSAAGKALRDWDALMVVEEGKPVG MLBr_02396|M.leprae_Br4923 EGRASLADAVSEHMGPPLRLIGDGELVSVAGEALRDSDALMVVEKGKLVG MMAR_4390|M.marinum_M SGKAKLADAVSQHMSPPLKLIGAGELVGVAGKALRDWDALMVVEEGKPVG MUL_0203|M.ulcerans_Agy99 SGKAKLADAVSQHMSPPLKLIGAGELVGVAGKALRDWDALMVVEEGKPVG MAV_1201|M.avium_104 EGRAKLADAVSLHMSPPLPMIGAGESVSAAGKALRDWDALMVVEEGKPVG Mflv_2043|M.gilvum_PYR-GCK EGRAKLADAVAQHMSPPLPLIGAGELVSAAAKTLRECDAVMVVEEGKPAG Mvan_4674|M.vanbaalenii_PYR-1 EGRAKLADAVADHMGPPLPLIGVGELVSTAAKALRESDAVMVVEEGKPVG MSMEG_5270|M.smegmatis_MC2_155 EGRAKLADAVAEHMSPPLPLIGAGELVSTAAKTLRESDAVMVVEDGKPVG TH_1371|M.thermoresistible__bu EGRAKLTDAVAEHMGAPLPLIGAGEPVQAAAKMLRECDAVMVVEEGKPAG MAB_1195|M.abscessus_ATCC_1997 EGRAQLADAVAQHMSPPLPLVGSGEPLSTAGSMLRDTDAVMVVDEGKPVG .*:*.*:***: **..** ::* ** : .*.. **: **:***:.** .* Mb1106|M.bovis_AF2122/97 VITRYDLLGFLSEG----AGRR Rv1077|M.tuberculosis_H37Rv VITRYDLLGFLSEG----AGRR MLBr_02396|M.leprae_Br4923 VITRYDLLGFLSEG----APLR MMAR_4390|M.marinum_M VITRYDLLGFLSEG----ALRR MUL_0203|M.ulcerans_Agy99 VITRYDLLGFLSEG----ALRR MAV_1201|M.avium_104 VITRYDLLGFLSEGPRGSGGRR Mflv_2043|M.gilvum_PYR-GCK VLTRHDLLGYLSDS----SPGH Mvan_4674|M.vanbaalenii_PYR-1 VLTRHDLLGYLSEG----NARR MSMEG_5270|M.smegmatis_MC2_155 VLTRHDLLGFLSEG----GYRH TH_1371|M.thermoresistible__bu VLTRHDLLGFLSES----TAAH MAB_1195|M.abscessus_ATCC_1997 VITRHDLLGFVSSGR---GVRH *:**:****::*.. :