For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4039 | - | - | 100% (594) | conserved hypothetical membrane protein |
M. thermoresistible (build 8) | TH_0493 | - | e-115 | 40.65% (583) | conserved membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1466 | - | 1e-120 | 41.92% (594) | hypothetical protein Mb1466 |
M. gilvum PYR-GCK | Mflv_2113 | - | 1e-114 | 40.57% (594) | hypothetical protein Mflv_2113 |
M. tuberculosis H37Rv | Rv1431 | - | 1e-119 | 41.75% (594) | hypothetical protein Rv1431 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4552 | - | 1e-109 | 40.48% (583) | hypothetical protein MAB_4552 |
M. marinum M | MMAR_1581 | - | 0.0 | 69.23% (598) | hypothetical protein MMAR_1581 |
M. avium 104 | MAV_3343 | - | 1e-125 | 43.30% (582) | hypothetical protein MAV_3343 |
M. smegmatis MC2 155 | MSMEG_5202 | - | 1e-108 | 38.49% (582) | hypothetical protein MSMEG_5202 |
M. ulcerans Agy99 | MUL_3453 | - | 0.0 | 69.23% (598) | hypothetical protein MUL_3453 |
M. vanbaalenii PYR-1 | Mvan_4591 | - | 1e-115 | 41.58% (594) | hypothetical protein Mvan_4591 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2113|M.gilvum_PYR-GCK MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVIHLFYVVK Mvan_4591|M.vanbaalenii_PYR-1 MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVLHLFYVVK MSMEG_5202|M.smegmatis_MC2_155 MGFLKQTAPQVDFEEWSKGTRAEKIRPMARHWAEVGFGTPVALHLFYVVK MAB_4552|M.abscessus_ATCC_1997 MGFLKPTLPVVDVADWGKGTRAEKIRPMARHWAEVGFGTPVALHLFYVLK Mb1466|M.bovis_AF2122/97 MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTK Rv1431|M.tuberculosis_H37Rv MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTK MAV_3343|M.avium_104 MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFK MMAR_1581|M.marinum_M MGFFKPRFPDVDPDTFLRKPLMERGRILAQSWVEYGFPSPRMVHAIYILK MUL_3453|M.ulcerans_Agy99 MGFFKPRFPDVDPDTFLRKPLMERGRILAQSWVEYGFPSPRMVHAIYILK TH_4039|M.thermoresistible__bu MSFTQHDYPDVEPKEFLRRPLLERIRILSTHWVEHGFGTPFMVPLVYVAK *.* * *: : . : :: *.* ** :* : .*: * Mflv_2113|M.gilvum_PYR-GCK ILLYVLVAWLIVLS-TSGIDGFTDVAAWYHEPIVYQKVVFYTMLFEVVGL Mvan_4591|M.vanbaalenii_PYR-1 ILLYILVAWLIVLT-TSGIDGFTNVAAWYHEPIVYQKVVFYTMLFEVVGL MSMEG_5202|M.smegmatis_MC2_155 ICLYVLGAWLVVLS-TRGIDGFTAVADWWTEPIVFEKVVLYTMLYEVVGL MAB_4552|M.abscessus_ATCC_1997 IALYILGGWLFAMVTTEGIDRWTDFS----LPIVFQKVVLYTMLFEVVGL Mb1466|M.bovis_AF2122/97 IAVYVAAGAAIISL-TPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGF Rv1431|M.tuberculosis_H37Rv IAVYVAAGAAIISL-NPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGF MAV_3343|M.avium_104 IAGYVAGAAAVISL-TPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGL MMAR_1581|M.marinum_M LIFGYALGGVIVATLTSGLPAFWHVAAWWNQPIVYQKVILWTVLLESIGV MUL_3453|M.ulcerans_Agy99 LIFGYALGVVIVATLTSGLPAFWHVAAWWNQPIVYQKVILWTVLLESIGV TH_4039|M.thermoresistible__bu VTLLYILGGVVIATVTSGLPAFWHVSQWWDQPIVYQKFILWTVLLEAIGL : . . . *: .. ***::*.:.:*:* * :*. Mflv_2113|M.gilvum_PYR-GCK GCGFGPLNNRFFPPMGSVLYWLRPRTIRLPPWPNRVPLTAGDTRTPVDVV Mvan_4591|M.vanbaalenii_PYR-1 GCGFGPLNNRFFPPMGSILYWLRPRTIRLPPWPNRVPLTAGDSRTPFDVL MSMEG_5202|M.smegmatis_MC2_155 GCGFGPLNNRFFPPMGSILYWLRPKTIRLPPWPDRVPLTKGDTRTVFDAV MAB_4552|M.abscessus_ATCC_1997 GCGFGPLNNRFFPPLGSILYWLRPNTIRLPPWP-RIPLTKGSARTAVDIA Mb1466|M.bovis_AF2122/97 GCGSGPLTGRFWPPIGGFLYWLRPNTIRLPAWPDKVPFTQGDTRTVVDVA Rv1431|M.tuberculosis_H37Rv GCGSGPLTGRFWPPIGGFLYWLRPNTIRLPAWPDKVPFTQGDTRTVVDVA MAV_3343|M.avium_104 GCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVA MMAR_1581|M.marinum_M AGSWGPLAGKIKPMTGGIRFWARPGTIRLRPWK-WVPFTKGDRRTLLDVA MUL_3453|M.ulcerans_Agy99 AGSWGPLAGKIKPMTGGIRFWTRPGTIRLRPWK-WVPFTKGDRRTLLDVA TH_4039|M.thermoresistible__bu GGSWGPLAGKVKPMTGGIQFWLRRGTIRLRPWA-WVPLTAGNRRGWPDVI . . *** :. * *.. :* * **** .* :*:* *. * * Mflv_2113|M.gilvum_PYR-GCK LYAALLAVLVIALFSDGTG----PIPEIGSEVGVLPVWQTATIIGLLVVA Mvan_4591|M.vanbaalenii_PYR-1 LYAALLVMLLFALFSDGTG----PIPELGSEVGVLPVWQTATIIGLLVVA MSMEG_5202|M.smegmatis_MC2_155 LYGALLVVLLIAIFSDGTG----PLPALGTEIGVLPMWQIAAVLVLLAVL MAB_4552|M.abscessus_ATCC_1997 LYAAFLGMVLVALLSQPT------------AAGLLPTWQTAAILGLLVIT Mb1466|M.bovis_AF2122/97 LYAIVLIGGVWALLSPGSPGPGGTPVTAAGDVGLINPVLVVPTIVALGVL Rv1431|M.tuberculosis_H37Rv LYAIVLIGGVWALLSPGSPGPGGTPVTAAGDVGLINPVLVVPTIVALGVL MAV_3343|M.avium_104 LYLVVLGSGVAALLSPGR----GGPVTAAGDVGLIDPVLVVPAIVALALL MMAR_1581|M.marinum_M LYVALLVSVAVALFSPGVPSDSLSAALPGNTSGLVSPALLIAPMVLLVLV MUL_3453|M.ulcerans_Agy99 LYVALLVSVAVALFSPGVPSDSLSAALPGNTSGLVSPALLIAPMVLLVLV TH_4039|M.thermoresistible__bu LYASLLISLVVALLSPGVTTASLLERLPDNTSGLVNPLLMVAPIVLLILV ** .* *::* *:: . : * : Mflv_2113|M.gilvum_PYR-GCK GLRDKVIFLAARGEVYG--SLAVCFLFS--GADIIIAAKLVCLTIWIGAA Mvan_4591|M.vanbaalenii_PYR-1 GLRDKVIFLAARGEVYG--SLAVCFLFS--GADIIIAAKLVCLVIWLGAA MSMEG_5202|M.smegmatis_MC2_155 GLRDKVIFLAARGEVYA--SFTVAFLFAGHGVDAILAAKLVCMVIWLGAA MAB_4552|M.abscessus_ATCC_1997 GLRDKVIFLAARGEVYG--ALTVAFLFT--GADMIMAAKLIFMVIWIGAA Mb1466|M.bovis_AF2122/97 GLRDKTIFLAARGEHYW--LKLFVFFFP--FTDQIAAFKIIMLCLWWGAA Rv1431|M.tuberculosis_H37Rv GLRDKTIFLAARGEHYW--LKLFVFFFP--FTDQIAAFKIIMLCLWWGAA MAV_3343|M.avium_104 GLRDKTIFLAARGEHYG--LTLLVFFFG--FTDQIAAFKIIMLALWWGAA MMAR_1581|M.marinum_M GLRDKTIFLGARGEQYLPAMFFFAVLGFANFADMIIALKLLIVVVWVGAG MUL_3453|M.ulcerans_Agy99 GLRDKTIFLGARGEQYLPAMFFFAVLGFANFADMIIALKLLIVVVWVGAG TH_4039|M.thermoresistible__bu GLRDKTIFLAARGEQYLPAMVFFAVLGFT---DMIVALKLLIVVVWVCAG *****.***.**** * . .: * * * *:: : :* *. Mflv_2113|M.gilvum_PYR-GCK TSKLNKHFPFVISTMMSNNPVIRPR---SIKRKFFEHFPDDLRPGRASRV Mvan_4591|M.vanbaalenii_PYR-1 TSKLNKHFPFVISTMMSNNPVMRPR---WIKRKFFEHFPDDLRPGRASRF MSMEG_5202|M.smegmatis_MC2_155 TSKLNKHFPFVISTMMSNNPVLRPR---FIKRKFFEHFPDDLRPGRPSRW MAB_4552|M.abscessus_ATCC_1997 TSKLNRHFPFVISTMMSNNPLIRAR---RLKRAFFEKFPDDLRPGRLSRV Mb1466|M.bovis_AF2122/97 TSKLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKL Rv1431|M.tuberculosis_H37Rv TSKLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKL MAV_3343|M.avium_104 TSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKV MMAR_1581|M.marinum_M ASKFGKHFANVIPPMVSNSPAIAFR---WLKRAHYRNFPRDLRPSRLAEV MUL_3453|M.ulcerans_Agy99 ASKFGKHFANVIPPMVSNSPAIAFR---WLKRAHYRNFPRDLRPSRLAEV TH_4039|M.thermoresistible__bu VSKFGRHFARVIPPMTSNSPTVATLP--AFKRAMYRDPRNDLRPSRLAEF .**:.:**. *:. * **.. : :*: : . ****. .. Mflv_2113|M.gilvum_PYR-GCK LAHFS-TAIEMLVPLVLFFSHGG--WPTAIAAFVMLVFHFGILSAIPMGV Mvan_4591|M.vanbaalenii_PYR-1 LAHFS-TAIEGLVPLVLFFSHGG--WATAIAAFVMLVFHFGILSAIPMGV MSMEG_5202|M.smegmatis_MC2_155 LAHVS-TAIEMLVPLALFFSHGG--WPTALAATVMICFHFGILSAIPMGV MAB_4552|M.abscessus_ATCC_1997 VAHVS-TAVEGLVPFALFFSHGG--WVTTVAAGVMVCFHLGILTAIPMGV Mb1466|M.bovis_AF2122/97 MAHGGGTTAEFLVPGILVLVADGHPWRWFLIG-FMVLFHLNILSNLPMGV Rv1431|M.tuberculosis_H37Rv MAHGGGTTAEFLVPGILVLVADGHPWRWFLIG-FMVLFHLNILSNLPMGV MAV_3343|M.avium_104 MAHVGGTTAEFLVPLVLVFVADGHRWAWFLIA-FMVLFHLNIASTIPMGV MMAR_1581|M.marinum_M MAHAAGTTVEILAPLTLLFSTNK--WLTLAAAALMVSFHLFIISTFPLAV MUL_3453|M.ulcerans_Agy99 MAHAAGTTVEVLAPLTLLFSTNK--WLTLAAAALMVSFHLFIISTFPLAV TH_4039|M.thermoresistible__bu MAHVLGTVVEVVAPLVLLFSHNK--TLTVAAVVLMLGLHLYIISAFPLAV :** *. * :.* *.: . .*: :*: * : :*:.* Mflv_2113|M.gilvum_PYR-GCK PLEWNVFMMFSVLALFVGN---AGIGLGDLQSPWP-IVLFAVVAGTVVIG Mvan_4591|M.vanbaalenii_PYR-1 PLEWNVFMMFSVLALFVGN---AGIGLADLQSPWP-ILLFAAVAGTVVIG MSMEG_5202|M.smegmatis_MC2_155 PLEWNVFMIFCVATLFVGH---ADVGITDLSTPLP-LLLLAVLVTTVTLG MAB_4552|M.abscessus_ATCC_1997 PLEWNVFMIFGVLALFVSH---ANVGLSDMQHPAPVLLLLAVSAGVVATG Mb1466|M.bovis_AF2122/97 PLEWNVFFIFSLCYLFGHY---GAITATDLRSPLLLAIVIAVVAVV-IMG Rv1431|M.tuberculosis_H37Rv PLEWNVFFIFSLCYLFGHY---GAITATDLRSPLLLAIVIAVVAVV-IMG MAV_3343|M.avium_104 PLEWNVFFIFSLFYLFGHY---AGVTATGLSSPLLLVILIAALAVVPILG MMAR_1581|M.marinum_M PLEWNVLFAYATIFLFLGFPAWQGYGVTSMSSPWLLAAIVAALLFFPILG MUL_3453|M.ulcerans_Agy99 PLEWNVLFAYATIFLFLGFPAWQGYGVTSMSSPWLLAAIVAALLFFPILG TH_4039|M.thermoresistible__bu PLEWNVLFSFATVFLFLGFPSWEGYAVGDMSSPWLTVVIVAALLFFPILG ******:: : ** .: * :.*. * Mflv_2113|M.gilvum_PYR-GCK NLFPRKVSFLPGMRYYAGNWDTTLWCVKPSASEKITSGIVAIASMPAAQM Mvan_4591|M.vanbaalenii_PYR-1 NLFPRKVSFLPGMRYYAGNWDTTLWCVKPSAAEKIANGIVAIASMPAAQM MSMEG_5202|M.smegmatis_MC2_155 NLFPRKISFLPGMRYYAGNWDTSLWCVKPSAAEKIEKNIVAIASMPAAQM MAB_4552|M.abscessus_ATCC_1997 NLLPRKVSFLPGMRYYAGNWDTTLWCIKPSASAKIEKGIVAIASMPQAQM Mb1466|M.bovis_AF2122/97 NLLPEKISFLPAMRYYAGNWATSIWCFRGDAEATMETSVVKSSALVVNQL Rv1431|M.tuberculosis_H37Rv NLLPEKISFLPAMRYYAGNWATSIWCFRGDAEATMETSVVKSSALVVNQL MAV_3343|M.avium_104 NLFPQQISFLPAMRYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQL MMAR_1581|M.marinum_M NFRPDKVSFLPSMRQYAGNWASAVWAFAPGTEHKLNK-VTRSSKNQLDQF MUL_3453|M.ulcerans_Agy99 NFRPDKVSFLPSMRQYAGNWASAVWAFAPGTEHKLNK-VTRSSKNQLDQF TH_4039|M.thermoresistible__bu NVRPDKVSFLPSMRQYSGNWACSVWAFAPGAEAKLDR-VKRPAINQIDQF *. * ::****.** *:*** : *.. .: .: : : *: Mflv_2113|M.gilvum_PYR-GCK EKFYGSKETAEMYQYMGYAFRSFNTHGRAMFTLAHRAMAGQ-DEGEYVLT Mvan_4591|M.vanbaalenii_PYR-1 EKFYGSKETAEVYQYMGYAFRSFNTHGRAMFTLAHRAMADG-SEDDYVLT MSMEG_5202|M.smegmatis_MC2_155 ERYYGSPETAQMYLYMGYAFRGFNSHGRALFTLAHRAMAGH-DEGEYVLT MAB_4552|M.abscessus_ATCC_1997 ERYYGSKDAAQIYMYIGYAFRAMNTHGRAMFTLAHRAMAGQ-DESEYVIT Mb1466|M.bovis_AF2122/97 AKLYDG-ATAEIMTDQVAAFRAMHTHGRALNGLLPRALD---DEAHYRIR Rv1431|M.tuberculosis_H37Rv AKLYDG-ATAEIMTDKVAAFRAMHTHGRALNGLLPRALD---DEAHYRIR MAV_3343|M.avium_104 ARLYDP-QSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADEADYLLR MMAR_1581|M.marinum_M IDFGYEPQWAEITMQHSIAWRSMHSQGRGLFSVLLKNLP---DIDTRTVR MUL_3453|M.ulcerans_Agy99 IDFGYEPQWAEITMQRSIAWRSMHSQGRGLFSVLLKNLP---DIDTRTVR TH_4039|M.thermoresistible__bu IAYGYEPEWAAVIMNLPATFRAMHTQGRGLLSVLVKNLP---DIDTRTVR * : :*.::::**.: : : : . : Mflv_2113|M.gilvum_PYR-GCK DGERICSTAIGWNFGDGHMHNEQLITALQKRCRFEPGEVRVLILDAQPIH Mvan_4591|M.vanbaalenii_PYR-1 DGERICSTAIGWNFGDGHMHNEQLIAALQKRCQFEPGEVRVLLLDAQPIH MSMEG_5202|M.smegmatis_MC2_155 DGERIVSTAIGWNFGDGHMSNEQLVDALQKRCHFEPGEVRIVMLDAQPIQ MAB_4552|M.abscessus_ATCC_1997 DGERICSTAIGWNFGDGHMHNEQLIAAMQERCHFEPGEVRIVLLDAQPIH Mb1466|M.bovis_AF2122/97 EGEIVAGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQPIH Rv1431|M.tuberculosis_H37Rv EGEIVAGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQPIH MAV_3343|M.avium_104 DGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQ MMAR_1581|M.marinum_M EGEFICNSLIGFNFGDGHLHNEDLIAAMQTQAAFEPGELVVVWVESQAWG MUL_3453|M.ulcerans_Agy99 EGEFICNSLIGFNFGDGHLHNEDLIAAMQTQAAFEPGELVVVWVESQAWG TH_4039|M.thermoresistible__bu EGEWVCNSLIGWNFGDGHLHDERMIAAVQEQVGFEPGDLVVAWAESQAWG :** : .. :*:***:**: :* :: *:* : * *:: : :.*. Mflv_2113|M.gilvum_PYR-GCK KQRQEYRLVDAATGEFERGYVMVADMVTRQPWD---DTVPVHVTWQKSG- Mvan_4591|M.vanbaalenii_PYR-1 RQRQEYRLVDAATGEFERGYVMVADMVTRQPWD---DTVPVHVTWRR--- MSMEG_5202|M.smegmatis_MC2_155 RQTQNYRLVDAATGEFERGYVKVADMVTRQPWD---DDVPVHGVHSLSGE MAB_4552|M.abscessus_ATCC_1997 RQTQRYRLVDAATGEFESGYVRVADMVNRQPWD---DELPVQVNS----- Mb1466|M.bovis_AF2122/97 VQKQWYRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHVTTQRGTP Rv1431|M.tuberculosis_H37Rv VQKQWYRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHVTTQRGTP MAV_3343|M.avium_104 RQTQAYRIVDAKTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG----- MMAR_1581|M.marinum_M SKVQHYKVIDAALGVLERGTWKVADAVAEQPWLP-NGPIPTQVTWSLGGR MUL_3453|M.ulcerans_Agy99 SKVQHYKVIDAALGVLERGTWKVADAVAEQPWLP-NGPIPTQVTWSLRGR TH_4039|M.thermoresistible__bu SPVQHYKLIDAALGVIETGTWRVDDVAEAQPWLP-NGPVPTTVTWS---- * *:::** * :* * * . *** . *. Mflv_2113|M.gilvum_PYR-GCK ---------------- Mvan_4591|M.vanbaalenii_PYR-1 ---------------- MSMEG_5202|M.smegmatis_MC2_155 RREHA----------- MAB_4552|M.abscessus_ATCC_1997 ---------------- Mb1466|M.bovis_AF2122/97 SKP------------- Rv1431|M.tuberculosis_H37Rv SKP------------- MAV_3343|M.avium_104 ---------------- MMAR_1581|M.marinum_M RERIRDGQDREHGALA MUL_3453|M.ulcerans_Agy99 RERIRDGQEREHGALA TH_4039|M.thermoresistible__bu --RFRDGR----GAVV