For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYVAGAAAVISLTPGLGGL GRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGD SRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHY GLTLLVFFFGFTDQIAAFKIIMLALWWGAATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVD DLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFS LFYLFGHYAGVTATGLSSPLLLVILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRRGAEDK IEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADEADYLLRDGEIV AGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDAKTGLIEAGHVDVAS MLSRQPWPEPGDEYPVHVHG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3343 | - | - | 100% (581) | hypothetical protein MAV_3343 |
M. avium 104 | MAV_1261 | - | e-163 | 49.74% (581) | hypothetical protein MAV_1261 |
M. avium 104 | MAV_1654 | - | e-146 | 46.22% (582) | hypothetical protein MAV_1654 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1466 | - | 0.0 | 75.30% (583) | hypothetical protein Mb1466 |
M. gilvum PYR-GCK | Mflv_2113 | - | 1e-156 | 49.40% (581) | hypothetical protein Mflv_2113 |
M. tuberculosis H37Rv | Rv1431 | - | 0.0 | 75.30% (583) | hypothetical protein Rv1431 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4552 | - | 1e-150 | 49.23% (583) | hypothetical protein MAB_4552 |
M. marinum M | MMAR_2236 | - | 0.0 | 75.30% (579) | hypothetical protein MMAR_2236 |
M. smegmatis MC2 155 | MSMEG_5202 | - | 1e-160 | 50.60% (583) | hypothetical protein MSMEG_5202 |
M. thermoresistible (build 8) | TH_0493 | - | 1e-163 | 51.03% (582) | conserved membrane protein |
M. ulcerans Agy99 | MUL_0139 | - | 1e-158 | 49.05% (579) | hypothetical protein MUL_0139 |
M. vanbaalenii PYR-1 | Mvan_4591 | - | 1e-156 | 49.40% (581) | hypothetical protein Mvan_4591 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2113|M.gilvum_PYR-GCK MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVIHLFYVVK Mvan_4591|M.vanbaalenii_PYR-1 MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVLHLFYVVK MSMEG_5202|M.smegmatis_MC2_155 MGFLKQTAPQVDFEEWSKGTRAEKIRPMARHWAEVGFGTPVALHLFYVVK TH_0493|M.thermoresistible__bu MGFLKQNTPVVDYEQWRTGTRAEKIKPMARHWAEVGFGTPVALHLFYVLK MAB_4552|M.abscessus_ATCC_1997 MGFLKPTLPVVDVADWGKGTRAEKIRPMARHWAEVGFGTPVALHLFYVLK MUL_0139|M.ulcerans_Agy99 MGFLKPVLPQVDIVEWGKGTRSEKIRPMARHWAEVGFGTPVVMHLFYVGK Mb1466|M.bovis_AF2122/97 MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTK Rv1431|M.tuberculosis_H37Rv MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTK MMAR_2236|M.marinum_M MGFMSPDLPDVDHETWHTLPRATRLQVVTRHWAEHGFGTPYAVYLLYLLK MAV_3343|M.avium_104 MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFK ***:. * ** * .* : ::*.*.* ***:* .::*:*: * Mflv_2113|M.gilvum_PYR-GCK ILLYVLVAWLIVLS-TSGIDGFTDVAAWYHEPIVYQKVVFYTMLFEVVGL Mvan_4591|M.vanbaalenii_PYR-1 ILLYILVAWLIVLT-TSGIDGFTNVAAWYHEPIVYQKVVFYTMLFEVVGL MSMEG_5202|M.smegmatis_MC2_155 ICLYVLGAWLVVLS-TRGIDGFTAVADWWTEPIVFEKVVLYTMLYEVVGL TH_0493|M.thermoresistible__bu IGLYILGAWLIAAA-TPGIGGLTDVADWWSEPIVFQKVVLYTMLFEVVGL MAB_4552|M.abscessus_ATCC_1997 IALYILGGWLFAMVTTEGIDRWTD----FSLPIVFQKVVLYTMLFEVVGL MUL_0139|M.ulcerans_Agy99 ILLYILVGWLIVFS-TKGIEGFTDVKSWYTEPIVFQKVVLYTMLFEVVGL Mb1466|M.bovis_AF2122/97 IAVYVAAGAAIISL-TPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGF Rv1431|M.tuberculosis_H37Rv IAVYVAAGAAIISL-NPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGF MMAR_2236|M.marinum_M IGIYVAAPAAIISL-TPGLGGLGHIADWWTQPIVYQKVIIFTLLFEVLGF MAV_3343|M.avium_104 IAGYVAGAAAVISL-TPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGL * *: . . *: : ***::*::.:*:*:*::*: Mflv_2113|M.gilvum_PYR-GCK GCGFGPLNNRFFPPMGSVLYWLRPRTIRLPPWPNRVPLTAGDTRTPVDVV Mvan_4591|M.vanbaalenii_PYR-1 GCGFGPLNNRFFPPMGSILYWLRPRTIRLPPWPNRVPLTAGDSRTPFDVL MSMEG_5202|M.smegmatis_MC2_155 GCGFGPLNNRFFPPMGSILYWLRPKTIRLPPWPDRVPLTKGDTRTVFDAV TH_0493|M.thermoresistible__bu GCGFGPLNNRFFPPMGSILYWLRPNTIRLPPWPNRIPFTRGTTRTPVDVA MAB_4552|M.abscessus_ATCC_1997 GCGFGPLNNRFFPPLGSILYWLRPNTIRLPPWP-RIPLTKGSARTAVDIA MUL_0139|M.ulcerans_Agy99 GCGFGPLNNRFFPPMGSSLYWLRFGTIRLPPWPERVPWTAGTKRKPVDVA Mb1466|M.bovis_AF2122/97 GCGSGPLTGRFWPPIGGFLYWLRPNTIRLPAWPDKVPFTQGDTRTVVDVA Rv1431|M.tuberculosis_H37Rv GCGSGPLTGRFWPPIGGFLYWLRPNTIRLPAWPDKVPFTQGDTRTVVDVA MMAR_2236|M.marinum_M GCGSGPLTGRFMPPVGGFLYWLRPKTIRLPPWPAKVPFTDGDTRTVVDVT MAV_3343|M.avium_104 GCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVA *** ***. ** **.*. ***** *****.** ::* * * *. .* Mflv_2113|M.gilvum_PYR-GCK LYAALLAVLVIALFSDGTGP----IPEIGSEVGVLPVWQTATIIGLLVVA Mvan_4591|M.vanbaalenii_PYR-1 LYAALLVMLLFALFSDGTGP----IPELGSEVGVLPVWQTATIIGLLVVA MSMEG_5202|M.smegmatis_MC2_155 LYGALLVVLLIAIFSDGTGP----LPALGTEIGVLPMWQIAAVLVLLAVL TH_0493|M.thermoresistible__bu LYGALLVMLVVALASGGTGP----VEALGTDIGLLPAWQIWAVLGLLAAA MAB_4552|M.abscessus_ATCC_1997 LYAAFLGMVLVALLSQP------------TAAGLLPTWQTAAILGLLVIT MUL_0139|M.ulcerans_Agy99 LYALLLIMLVTALFTDGSGP----MPELGSKVGLLPMWEIVMILLLLAMV Mb1466|M.bovis_AF2122/97 LYAIVLIGGVWALLSPGSPGPGGTPVTAAGDVGLINPVLVVPTIVALGVL Rv1431|M.tuberculosis_H37Rv LYAIVLIGGVWALLSPGSPGPGGTPVTAAGDVGLINPVLVVPTIVALGVL MMAR_2236|M.marinum_M LYAIVLISGGWALFSPGHAG----PVTASGDVGLIDPILVVPTIIALALL MAV_3343|M.avium_104 LYLVVLGSGVAALLSPGRGG----PVTAAGDVGLIDPVLVVPAIVALALL ** .* *: : *:: : * Mflv_2113|M.gilvum_PYR-GCK GLRDKVIFLAARGEVYGSLAVCFLFS--GADIIIAAKLVCLTIWIGAATS Mvan_4591|M.vanbaalenii_PYR-1 GLRDKVIFLAARGEVYGSLAVCFLFS--GADIIIAAKLVCLVIWLGAATS MSMEG_5202|M.smegmatis_MC2_155 GLRDKVIFLAARGEVYASFTVAFLFAGHGVDAILAAKLVCMVIWLGAATS TH_0493|M.thermoresistible__bu GLRDKVIFLAARGEVYASLTVTFLFA--GPDMIVAAKIVFLIIWLGAGVS MAB_4552|M.abscessus_ATCC_1997 GLRDKVIFLAARGEVYGALTVAFLFT--GADMIMAAKLIFMVIWIGAATS MUL_0139|M.ulcerans_Agy99 GLRDKVIFLAARGEVYGTLTVTFLLG--GIDMIVAAKLVFLVIWMGAATS Mb1466|M.bovis_AF2122/97 GLRDKTIFLAARGEHYWLKLFVFFFP--FTDQIAAFKIIMLCLWWGAATS Rv1431|M.tuberculosis_H37Rv GLRDKTIFLAARGEHYWLKLFVFFFP--FTDQIAAFKIIMLCLWWGAATS MMAR_2236|M.marinum_M GLRDKTVFLAARGEHYWLKLLVFFFP--FTDQIAAFKIIMLCLWWGAATS MAV_3343|M.avium_104 GLRDKTIFLAARGEHYGLTLLVFFFG--FTDQIAAFKIIMLALWWGAATS *****.:******* * . *:: * * * *:: : :* **..* Mflv_2113|M.gilvum_PYR-GCK KLNKHFPFVISTMMSNNPVIRPR---SIKRKFFEHFPDDLRPGRASRVLA Mvan_4591|M.vanbaalenii_PYR-1 KLNKHFPFVISTMMSNNPVMRPR---WIKRKFFEHFPDDLRPGRASRFLA MSMEG_5202|M.smegmatis_MC2_155 KLNKHFPFVISTMMSNNPVLRPR---FIKRKFFEHFPDDLRPGRPSRWLA TH_0493|M.thermoresistible__bu KLNRHFPFVISTMMSNNPVFRPR---WIKRRFFERFPDDLRPGRASRWLA MAB_4552|M.abscessus_ATCC_1997 KLNRHFPFVISTMMSNNPLIRAR---RLKRAFFEKFPDDLRPGRLSRVVA MUL_0139|M.ulcerans_Agy99 KLNRHFPFVISTMMSNNPLFRPR---FIKRMFFAKFPDDLRPGLLSRMLA Mb1466|M.bovis_AF2122/97 KLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKLMA Rv1431|M.tuberculosis_H37Rv KLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKLMA MMAR_2236|M.marinum_M KLNHHFPYVVAVMTSNNALLRGRLFNPIKHLLYRDHVNDLRPSWLPKIMA MAV_3343|M.avium_104 KLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMA ***:***:*::.* **..::* * :*: :: :****. .: :* Mflv_2113|M.gilvum_PYR-GCK HFS-TAIEMLVPLVLFFSHGG--WPTAIAAFVMLVFHFGILSAIPMGVPL Mvan_4591|M.vanbaalenii_PYR-1 HFS-TAIEGLVPLVLFFSHGG--WATAIAAFVMLVFHFGILSAIPMGVPL MSMEG_5202|M.smegmatis_MC2_155 HVS-TAIEMLVPLALFFSHGG--WPTALAATVMICFHFGILSAIPMGVPL TH_0493|M.thermoresistible__bu HLA-TAIELLVPLVLFFSHGG--WATAIAAGVMVLFHFGILSAIPMGVPL MAB_4552|M.abscessus_ATCC_1997 HVS-TAVEGLVPFALFFSHGG--WVTTVAAGVMVCFHLGILTAIPMGVPL MUL_0139|M.ulcerans_Agy99 HLS-TFIEMFVPVALFLSHGG--WPTTAAAIAMVCFHLGILTAIPMGVPL Mb1466|M.bovis_AF2122/97 HGGGTTAEFLVPGILVLVADGHPWRWFLIG-FMVLFHLNILSNLPMGVPL Rv1431|M.tuberculosis_H37Rv HGGGTTAEFLVPGILVLVADGHPWRWFLIG-FMVLFHLNILSNLPMGVPL MMAR_2236|M.marinum_M HVGGTTAEFLVPAVLVLVAGDQPWRWFLIG-FMVIFHLNILSNLPMGVPL MAV_3343|M.avium_104 HVGGTTAEFLVPLVLVFVADGHRWAWFLIA-FMVLFHLNIASTIPMGVPL * . * * :** *.: .. * . *: **:.* : :****** Mflv_2113|M.gilvum_PYR-GCK EWNVFMMFSVLALFVGNAGIGLGDLQSPWPIVLFAVVAG-TVVIGNLFPR Mvan_4591|M.vanbaalenii_PYR-1 EWNVFMMFSVLALFVGNAGIGLADLQSPWPILLFAAVAG-TVVIGNLFPR MSMEG_5202|M.smegmatis_MC2_155 EWNVFMIFCVATLFVGHADVGITDLSTPLPLLLLAVLVT-TVTLGNLFPR TH_0493|M.thermoresistible__bu EWNVFMIFGVLWLFVTHAQFGLADVGNPWPVAALSLVLAGTVVLGNLFPH MAB_4552|M.abscessus_ATCC_1997 EWNVFMIFGVLALFVSHANVGLSDMQHPAPVLLLLAVSAGVVATGNLLPR MUL_0139|M.ulcerans_Agy99 EWNVFMIFGVLALFVGHADLGLTDVKSPVPVAILFAVVAGIVILGNLFPR Mb1466|M.bovis_AF2122/97 EWNVFFIFSLCYLFGHYGAITATDLRSPLLLAIVIAVVAVV-IMGNLLPE Rv1431|M.tuberculosis_H37Rv EWNVFFIFSLCYLFGHYGAITATDLRSPLLLAIVIAVVAVV-IMGNLLPE MMAR_2236|M.marinum_M EWNVFFIFSLFYLFGHYGSIRAIDLRSPLLLAIVLAAVAVV-VAGNLFPE MAV_3343|M.avium_104 EWNVFFIFSLFYLFGHYAGVTATGLSSPLLLVILIAALAVVPILGNLFPQ *****::* : ** . . .: * : . ***:*. Mflv_2113|M.gilvum_PYR-GCK KVSFLPGMRYYAGNWDTTLWCVKPSASEKITSGIVAIASMPAAQMEKFYG Mvan_4591|M.vanbaalenii_PYR-1 KVSFLPGMRYYAGNWDTTLWCVKPSAAEKIANGIVAIASMPAAQMEKFYG MSMEG_5202|M.smegmatis_MC2_155 KISFLPGMRYYAGNWDTSLWCVKPSAAEKIEKNIVAIASMPAAQMERYYG TH_0493|M.thermoresistible__bu KVSFLPGMRYYAGNWDTTLWCVKPSAEEKINNGIVAIASMPAAQMERYYG MAB_4552|M.abscessus_ATCC_1997 KVSFLPGMRYYAGNWDTTLWCIKPSASAKIEKGIVAIASMPQAQMERYYG MUL_0139|M.ulcerans_Agy99 KISFLPGMRYYAGNWDTTLWCIKPSADAKIKRGIVAIASMPQAQLERFYG Mb1466|M.bovis_AF2122/97 KISFLPAMRYYAGNWATSIWCFRGDAEATMETSVVKSSALVVNQLAKLYD Rv1431|M.tuberculosis_H37Rv KISFLPAMRYYAGNWATSIWCFRGDAEATMETSVVKSSALVVNQLAKLYD MMAR_2236|M.marinum_M KISFLPAMRYYAGNWATSVWCFRAGAEEKIEASVVKSSALVVNQLAKLYD MAV_3343|M.avium_104 QISFLPAMRYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYD ::****.******** *: **.: .* .: .:. ::: *: : *. Mflv_2113|M.gilvum_PYR-GCK SKETAEMYQYMGYAFRSFNTHGRAMFTLAHRAMAG-QDEGEYVLTDGERI Mvan_4591|M.vanbaalenii_PYR-1 SKETAEVYQYMGYAFRSFNTHGRAMFTLAHRAMAD-GSEDDYVLTDGERI MSMEG_5202|M.smegmatis_MC2_155 SPETAQMYLYMGYAFRGFNSHGRALFTLAHRAMAG-HDEGEYVLTDGERI TH_0493|M.thermoresistible__bu SKETAEMYLYMGYAFRAFNTHGKALFTLAHRAMAG-HDEDDYTIIDGERI MAB_4552|M.abscessus_ATCC_1997 SKDAAQIYMYIGYAFRAMNTHGRAMFTLAHRAMAG-QDESEYVITDGERI MUL_0139|M.ulcerans_Agy99 -KDRAQIPMYLGYAFRAMNTHGRALFTLAHRAMAG-QDEDDYVITDGERI Mb1466|M.bovis_AF2122/97 -GATAEIMTDQVAAFRAMHTHGRALNGLLPRALD---DEAHYRIREGEIV Rv1431|M.tuberculosis_H37Rv -GATAEIMTDKVAAFRAMHTHGRALNGLLPRALD---DEAHYRIREGEIV MMAR_2236|M.marinum_M -ANTAEIMADKTAAFRAMHTHGRALNGLLPRAIG---NEAEYKVREGEIV MAV_3343|M.avium_104 -PQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADEADYLLRDGEIV *:: .:*.:::**:*: * **: .* .* : :** : Mflv_2113|M.gilvum_PYR-GCK CSTAIGWNFGDGHMHNEQLITALQKRCRFEPGEVRVLILDAQPIHKQRQE Mvan_4591|M.vanbaalenii_PYR-1 CSTAIGWNFGDGHMHNEQLIAALQKRCQFEPGEVRVLLLDAQPIHRQRQE MSMEG_5202|M.smegmatis_MC2_155 VSTAIGWNFGDGHMSNEQLVDALQKRCHFEPGEVRIVMLDAQPIQRQTQN TH_0493|M.thermoresistible__bu CSTAIGWNFGDGHMHNEQLIEAMQQRCGFEPGEVRVVLLDAQPIHRQTQQ MAB_4552|M.abscessus_ATCC_1997 CSTAIGWNFGDGHMHNEQLIAAMQERCHFEPGEVRIVLLDAQPIHRQTQR MUL_0139|M.ulcerans_Agy99 CSTAVGWNFGDGHMHNEQLIAAMQQRCNFEPGEVRIVLLDAQPIHKQTQA Mb1466|M.bovis_AF2122/97 AGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQPIHVQKQW Rv1431|M.tuberculosis_H37Rv AGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQPIHVQKQW MMAR_2236|M.marinum_M AGPLVGWNFGEGHLHNEQLVQAVQRRCNFADGDLRVIILEGQPIHIQKQW MAV_3343|M.avium_104 AGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQA .. :*****:**: ****: *:*.** * *::*:::*:.***: * * Mflv_2113|M.gilvum_PYR-GCK YRLVDAATGEFERGYVMVADMVTRQPWD---DTVPVHVTWQKSG------ Mvan_4591|M.vanbaalenii_PYR-1 YRLVDAATGEFERGYVMVADMVTRQPWD---DTVPVHVTWRR-------- MSMEG_5202|M.smegmatis_MC2_155 YRLVDAATGEFERGYVKVADMVTRQPWD---DDVPVHGVHSLSGERREHA TH_0493|M.thermoresistible__bu YRLVDAATGEFERGYVRVADMVVRQPWD---DTVPVHVTSSTLPTDRDSA MAB_4552|M.abscessus_ATCC_1997 YRLVDAATGEFESGYVRVADMVNRQPWD---DELPVQVNS---------- MUL_0139|M.ulcerans_Agy99 YRLVDAATGEFERGWVRVSDMVTRQPWA---DDVPVQVQSE--------- Mb1466|M.bovis_AF2122/97 YRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHVTTQRGTPSKP-- Rv1431|M.tuberculosis_H37Rv YRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHVTTQRGTPSKP-- MMAR_2236|M.marinum_M YRIVDAKTGLIEAGYVTVEDMLARQPWPEPGDEFPVHVTTQRAAQ----- MAV_3343|M.avium_104 YRIVDAKTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG---------- **:*** ** :* * * * .*: **** * **: Mflv_2113|M.gilvum_PYR-GCK - Mvan_4591|M.vanbaalenii_PYR-1 - MSMEG_5202|M.smegmatis_MC2_155 - TH_0493|M.thermoresistible__bu R MAB_4552|M.abscessus_ATCC_1997 - MUL_0139|M.ulcerans_Agy99 - Mb1466|M.bovis_AF2122/97 - Rv1431|M.tuberculosis_H37Rv - MMAR_2236|M.marinum_M - MAV_3343|M.avium_104 -