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VAGPDGGAGLRWGVEPMCAVLSEHGIAISPSTYYEWIAKTPTRREIRDAELVEIITAAREGKRKGRFVQT LGSRKLWIWLRGQGHDVARCTVERIMRENGWEGARYGSKHKTTVADSSHVRYPDLVDRRFYASAPNRLWV ADFTYVATWMGFVYVAFVIDAYSRRIVGWRAARSMTTDLVLDAIEHAFFTRTQDGTSLRGLIAHSDAGSQ YTSVAFTQRLIDEGVDPSVGSVGDALDNALAETTVGSFKNEVIRRQGPWRDVNQVELATAEWVVWFNTER PHEYLDDFTPEAVEKLHYDQKLTPPKAG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0665 | - | - | 100% (308) | integrase catalytic subunit |
| M. gilvum PYR-GCK | Mflv_3221 | - | 3e-83 | 52.16% (301) | integrase catalytic subunit |
| M. gilvum PYR-GCK | Mflv_2788 | - | 3e-83 | 52.16% (301) | integrase catalytic subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2838c | - | 1e-78 | 51.07% (280) | transposase |
| M. tuberculosis H37Rv | Rv3475 | - | 3e-86 | 51.82% (303) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2086c | - | 1e-23 | 49.57% (115) | putative transposase-like protein IS1601-D |
| M. marinum M | MMAR_2548 | - | 1e-109 | 65.98% (291) | transposase, ISMyma03_aa2 |
| M. avium 104 | MAV_5093 | - | 4e-72 | 48.14% (295) | transposase |
| M. smegmatis MC2 155 | MSMEG_1721 | - | 4e-83 | 52.49% (301) | IS1137, transposase orfB |
| M. thermoresistible (build 8) | TH_3317 | - | 6e-56 | 43.36% (286) | PUTATIVE Integrase, catalytic region |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5973 | - | 3e-53 | 50.23% (215) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 ------------------------------------MAFIDANR------
TH_3317|M.thermoresistible__bu -----------------------------------MIAFIDAHR------
Mvan_5973|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv AEALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGP
Mflv_0665|M.gilvum_PYR-GCK -------------------------------------------MAGPDGG
MMAR_2548|M.marinum_M --------------------------------------------------
MSMEG_1721|M.smegmatis_MC2_155 ------------------------------------MEFISAHQHMRVGV
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 --DEFGVEPICTVLRSAGLQVAPST-YYANKTRT-PSARAQRDAVMRPVI
TH_3317|M.thermoresistible__bu --DQFGVELICRVLRAAIAGFLTSRGYRAAKARP-PSERAMRDELLIAEL
Mvan_5973|M.vanbaalenii_PYR-1 ---------------------MAPSTYYDVKSRC-PSARARRDAELGPAL
Mb2838c|M.bovis_AF2122/97 -------------------MPIAPSTYYDHINRE-PSRRELRDGELKEHI
Rv3475|M.tuberculosis_H37Rv DGLRWGVESICTQLT-ELGVPIAPSTYYDHINRE-PSRRELRDGELKEHI
Mflv_0665|M.gilvum_PYR-GCK AGLRWGVEPMC-AVLSEHGIAISPSTYYEWIAKT-PTRREIRDAELVEII
MMAR_2548|M.marinum_M -------------MLTEHGIKISPSTYYEWMKRT-PSKQQLRDEAVTASI
MSMEG_1721|M.smegmatis_MC2_155 DGLKWGVESMC-AVLSEYGVTIAPSTYYAHRARQGPSKADWADAQVIDAI
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 TQLWEDN-----YRVYGARKLWKAARRAGHDIGRDQIARLMREAGIAGVR
TH_3317|M.thermoresistible__bu RTVHEQN-----FSVYGVKKMHHAMKRRGWRVGREQTRRLMRKAGLRGVQ
Mvan_5973|M.vanbaalenii_PYR-1 RVIWEDN-----YRVYGAVKLWKAARRGGHDVGRDQVARLMRSLGIEGVR
Mb2838c|M.bovis_AF2122/97 SRVHAAN-----YGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTT
Rv3475|M.tuberculosis_H37Rv SRVHAAN-----YGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTT
Mflv_0665|M.gilvum_PYR-GCK TAAREGKRKGRFVQTLGSRKLWIWLRGQGHDVARCTVERIMRENGWEGAR
MMAR_2548|M.marinum_M KEFRE---RNPLNKTLGSRKVWIKLRGDGMDVARCTVERLMQANRWQGAR
MSMEG_1721|M.smegmatis_MC2_155 WQLRQ---SQSLYRVLGARKTWIVLRTNGIDVSRCVVERVMREMGWRGAC
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 RGKRVRTTKPGPGAPRHPDLVGRDFTASAPNQLWVTDLTFVPTWAGVAYV
TH_3317|M.thermoresistible__bu RGKPVFTTISDPAHCRPADLVNRQFSAEAPDRLWVADITFVRTWQGFCYT
Mvan_5973|M.vanbaalenii_PYR-1 RGKRVTTTRADPAAPRHPDLVKRQFTATAPNQLWVTDLTFVPTWVGVAYV
Mb2838c|M.bovis_AF2122/97 RGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYV
Rv3475|M.tuberculosis_H37Rv RGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYV
Mflv_0665|M.gilvum_PYR-GCK YGSKHKTTVADSSHVRYPDLVDRRFYASAPNRLWVADFTYVATWMGFVYV
MMAR_2548|M.marinum_M YGGAPKTTIQDEKAQRATDLVDRVFAAPAPNRLWVADFTYCPTWAGMVYV
MSMEG_1721|M.smegmatis_MC2_155 KRRRVRTTVADPAATRAPDRVRRNFVAGAPDRLWVADFTYCRTRAGWAYT
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------MPGLTC
MAV_5093|M.avium_104 CFLTDAFSRMIIGWRVASHMRTT-VVLDTIEMARWSRGK----MLAGLRC
TH_3317|M.thermoresistible__bu AFVTDACTKAIKGWAVAASMRTEDLPLEAFNHAVWHSDS----DLSELIH
Mvan_5973|M.vanbaalenii_PYR-1 CFIVDAFSRLIVGWRAASNMRTT-MVLDALEMARWSRGN----TLSGLRC
Mb2838c|M.bovis_AF2122/97 AFVTDAYARRILGWRVASTMATS-MVLDAIEQAIWTRQQEGVLDLKDVIH
Rv3475|M.tuberculosis_H37Rv AFVTDAYARRILGWRVASTMATS-MVLDAIEQAIWTRQQEGVLDLKDVIH
Mflv_0665|M.gilvum_PYR-GCK AFVIDAYSRRIVGWRAARSMTTD-LVLDAIEHAFFTRTQDG-TSLRGLIA
MMAR_2548|M.marinum_M AFVIDAFARRVIGWRAATSMKTA-LVIDALEHAFFTRAQEGFTDLSGLVA
MSMEG_1721|M.smegmatis_MC2_155 AFVTDVYARKIVGWKVATEMTQK-LVTDAIDHAIDTRKRSGAASLDSLIH
: :
MAB_2086c|M.abscessus_ATCC_199 HSDAGSQFTSIRYGERLAEIGAVPSIGTIGDSYDNAL-ETVNGYYKAELI
MAV_5093|M.avium_104 HSDAGSQFTSIRYSERLAEIGAVPSIGTVGDSFDNALAETVNGYYKAELI
TH_3317|M.thermoresistible__bu HSDRGSQYLSLTYTDRLAELGIAPSVGSRGDSYDNALAEAVNAAYKTELI
Mvan_5973|M.vanbaalenii_PYR-1 HSDAGSQFTSIRYGERLAELGAVPSIGSVGDSFDNALAERAC------LI
Mb2838c|M.bovis_AF2122/97 HTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Rv3475|M.tuberculosis_H37Rv HTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Mflv_0665|M.gilvum_PYR-GCK HSDAGSQYTSVAFTQRLIDEGVDPSVGSVGDALDNALAETTVGSFKNEVI
MMAR_2548|M.marinum_M HSDAGSQYTSIAFTTRLIDAGIDASVGSVADAYDNALAETTVGSFKNELI
MSMEG_1721|M.smegmatis_MC2_155 HSDAGSQYTAVAFTERLAAEGILPSVGSVGDSFDNALAESVNSSYKTELI
*:* ***: :: : ** * .*:*: ..: **** * :*
MAB_2086c|M.abscessus_ATCC_199 YGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYLNDIPPTEFEAAFY-D
MAV_5093|M.avium_104 YGPARPGPWKTVEDVELATLSWVHWHNTSRLHGYLNDVPPAEFEAAFY-A
TH_3317|M.thermoresistible__bu N---RGKPWRSVDDVELATAGWVAWYNQERLHEALGYVPPAEYEAALTGT
Mvan_5973|M.vanbaalenii_PYR-1 D----------------CVSGWA---------------------------
Mb2838c|M.bovis_AF2122/97 K---PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQ
Rv3475|M.tuberculosis_H37Rv K---PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQ
Mflv_0665|M.gilvum_PYR-GCK R---RQGPWRDVNQVELATAEWVVWFNTERPHEYLDDFTPEAVEKLHYDQ
MMAR_2548|M.marinum_M R---RQGPWRDVDHVEIGTLNWVDWFNNERPHEYLADLTPTQAEALHYRH
MSMEG_1721|M.smegmatis_MC2_155 D---RQPLYPGATELALGTAEWVAFYNRQRPNGYCQDLTPDRAEALYYHR
. *.
MAB_2086c|M.abscessus_ATCC_199 AHGTDQPLAGIQ--
MAV_5093|M.avium_104 TKRTDHPLVEIQ--
TH_3317|M.thermoresistible__bu SHPASQPTPALATN
Mvan_5973|M.vanbaalenii_PYR-1 --------------
Mb2838c|M.bovis_AF2122/97 RQRPAAG-------
Rv3475|M.tuberculosis_H37Rv RQRPAAG-------
Mflv_0665|M.gilvum_PYR-GCK KLTPPKAG------
MMAR_2548|M.marinum_M KSSLAAAG------
MSMEG_1721|M.smegmatis_MC2_155 QRHPHAEEALR---