For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3309 | - | - | 100% (148) | - |
| M. thermoresistible (build 8) | TH_2748 | - | 4e-24 | 42.94% (163) | PUTATIVE - |
| M. thermoresistible (build 8) | TH_0050 | sodC | 8e-08 | 39.53% (86) | PROBABLE PERIPLASMIC SUPEROXIDE DISMUTASE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0552 | - | 3e-10 | 34.11% (129) | hypothetical protein Mb0552 |
| M. gilvum PYR-GCK | Mflv_0270 | - | 4e-25 | 42.01% (169) | hypothetical protein Mflv_0270 |
| M. tuberculosis H37Rv | Rv0538 | - | 3e-10 | 34.11% (129) | hypothetical protein Rv0538 |
| M. leprae Br4923 | MLBr_00877 | mmpS3 | 3e-09 | 32.87% (143) | hypothetical protein MLBr_00877 |
| M. abscessus ATCC 19977 | MAB_4279 | - | 4e-13 | 30.43% (161) | hypothetical protein MAB_4279 |
| M. marinum M | MMAR_0618 | - | 7e-21 | 40.56% (143) | hypothetical protein MMAR_0618 |
| M. avium 104 | MAV_4816 | - | 3e-10 | 33.58% (137) | hypothetical protein MAV_4816 |
| M. smegmatis MC2 155 | MSMEG_0700 | - | 3e-26 | 45.03% (151) | hypothetical protein MSMEG_0700 |
| M. ulcerans Agy99 | MUL_0583 | - | 7e-18 | 39.58% (144) | hypothetical protein MUL_0583 |
| M. vanbaalenii PYR-1 | Mvan_0627 | - | 5e-24 | 41.57% (166) | hypothetical protein Mvan_0627 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 -MDVALGVAVTDRVARLALVDSAAPGTVIDQFVLDVAEHPVEVLTETVVG
Rv0538|M.tuberculosis_H37Rv -MDVALGVAVTDRVARLALVDSAAPGTVIDQFVLDVAEHPVEVLTETVVG
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 MRDMSEPLGLSIGVANLVAARAGSVPVIRSSVLTLFEQRPTEVGLPDENP
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 TDRSLAGENHRLVATRLCWPDQAKADELQHALQDSGVHDVAVISEAQ---
Rv0538|M.tuberculosis_H37Rv TDRSLAGENHRLVATRLCWPDQAKADELQHALQDSGVHDVAVISEAQ---
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 NLTEPGLVLRGFVERVGDRAPLVAADGTKYLGAALTVEAVEAMARAVGYG
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 ---------------------AATALVGAAHAGSAVLLVGDETATLSVVG
Rv0538|M.tuberculosis_H37Rv ---------------------AATALVGAAHAGSAVLLVGDETATLSVVG
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 APITIAVPAYWSDDQFAALREEFFAQSDLAREGVAPMLVSDATAALAMLR
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 DPDAPPTMVAVAPVAGADATSTVDTLMARLGDQALAPGDVFLVGRSAEHT
Rv0538|M.tuberculosis_H37Rv DPDAPPTMVAVAPVAGADATSTVDTLMARLGDQALAPGDVFLVGRSAEHT
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 GTPGFPSDGVIALCDFGAGGTTVTLMDGRAGFAPVGPSLRYTDFSGDAID
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 TVLADQLRAASTMRVQTPDDPTFALARGAAMAAGAATMAHPALVADATTS
Rv0538|M.tuberculosis_H37Rv TVLADQLRAASTMRVQTPDDPTFALARGAAMAAGAATMAHPALVADATTS
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 QLVLDHLLASDVSTAMRGGSGRIGSQSRLLGACRRAKEQLSTAVAVTVAG
MLBr_00877|M.leprae_Br4923 -------------MSGPNPPGRENEESDSGNELSGELDPHNGVESVDELV
Mflv_0270|M.gilvum_PYR-GCK -------MARYGDSDDPN-YSDDDPTQLSNY--AYGDYEQAPP-------
Mvan_0627|M.vanbaalenii_PYR-1 -------MARYGDSDDQNYYSDDEPTQLSNYGTGYGEYDQSP--------
MSMEG_0700|M.smegmatis_MC2_155 -------MANNYSDDEPTQYAHSYG---GDYGADYGAYPPPDQ-------
TH_3309|M.thermoresistible__bu -------VTRYGPPDDGGYYAED-------------PYPAPGG-------
MMAR_0618|M.marinum_M -------MARHDPPDYGAGDPTAYGN--YGYGDQGGGYGQQP--------
MUL_0583|M.ulcerans_Agy99 -------MARHDPPDYGAGDPTAYGN--YGYGDQRGGYGQQP--------
Mb0552|M.bovis_AF2122/97 LPPAEAGQSGSEGEQLAYSQASDYELLPVDEYEEHDEYGAAAD-------
Rv0538|M.tuberculosis_H37Rv LPRAEAGQSGSEGEQLAYSQASDYELLPVDEYEEHDEYGAAAD-------
MAB_4279|M.abscessus_ATCC_1997 -------MSYPEPPEDPTMFNQQYHD------------------------
MAV_4816|M.avium_104 APGQGAQLTRAEFEQLISTPLDRFLDWCQEALRRNGIGNSTLRGVAIVGG
MLBr_00877|M.leprae_Br4923 PVPDSDLVTASDHTSETEVYSQAYSAPEAEHFTAVPYVPADLRLYDYDES
: .
Mflv_0270|M.gilvum_PYR-GCK -----PDAEPPVPWYRKPAALVGLGALGAVLIALIVFGLAKAITGDSD-S
Mvan_0627|M.vanbaalenii_PYR-1 -----TEADSATPWYRKPVALVSFGAVGALLIALVVFGLARAITGDST-S
MSMEG_0700|M.smegmatis_MC2_155 -----PPAPEPVPWYRKPAALVGLGALGALIVALVIYAVIQLFSSDDS-S
TH_3309|M.thermoresistible__bu -----PPEPEAPKWYRTPAAMFAAGVLAALLLVFIVWAVFR--TGSED-V
MMAR_0618|M.marinum_M -------PPEPTPGWRKPLALAGWGVLIAVLIGLIIFGIIQLAHGRPTPA
MUL_0583|M.ulcerans_Agy99 -------PPEPTPGWRKPLALAGWGVLIAVLIGLIIFGIIQLAHGRPTPA
Mb0552|M.bovis_AF2122/97 -----RSAPLSRRSLLIGNAVVAFAVIGFASLAVAVAVTIRPTAASKPVE
Rv0538|M.tuberculosis_H37Rv -----RSAPLSRRSLLIGNAVVAFAVIGFASLAVAVAVTIRPTAASKPVE
MAB_4279|M.abscessus_ATCC_1997 -----QEPDQPNPWYKQPAVLIALAGAGVAVVAVIAALIITRSDDKPAPA
MAV_4816|M.avium_104 GASIPLLTARLSGRFGVPVHSTAQPGLSAALGAATLGAQYASGAAPTAAA
MLBr_00877|M.leprae_Br4923 -----SVYDEPGAAPRWPWVVGVAAILAAISLVVSVSLLFTRTDTSKLST
Mflv_0270|M.gilvum_PYR-GCK ETTPTSS-------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 DTTTTTP-------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 STTSTTT-------------------------------------------
TH_3309|M.thermoresistible__bu PGSTEAP-------------------------------------------
MMAR_0618|M.marinum_M SVTKTVT-------------------------------------------
MUL_0583|M.ulcerans_Agy99 SVTKTVT-------------------------------------------
Mb0552|M.bovis_AF2122/97 GHQNAQPGKFMPLL-PTQQQAPVPPPPPDDPTAGFQGGTIPAVQNVVPRP
Rv0538|M.tuberculosis_H37Rv GHQNAQPGKFMPLL-PTQQQAPVPPPPPDDPTAGFQGGTIPAVQNVVPRP
MAB_4279|M.abscessus_ATCC_1997 GNTSSVS-------------------------------------------
MAV_4816|M.avium_104 AAAVETPTEMVGAGGLDMTQAAWAAQATDVDDALAWSQDADTSDEPVPYT
MLBr_00877|M.leprae_Br4923 PTTGRSTP------------------------------------------
.
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 --------------------------------------------------
TH_3309|M.thermoresistible__bu --------------------------------------------------
MMAR_0618|M.marinum_M --------------------------------------------------
MUL_0583|M.ulcerans_Agy99 --------------------------------------------------
Mb0552|M.bovis_AF2122/97 GTSPGVGGTPASPAPEAPAVPGVVPAPVPIPVPIIIPPFPGWQPGMPTIP
Rv0538|M.tuberculosis_H37Rv GTSPGVGGTPASPAPEAPAVPGVVPAPVPIPVPIIIPPFPGWQPGMPTIP
MAB_4279|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4816|M.avium_104 GRDATGEYASEARRFDDVAAGGLPWYKRTALVLSVAGAGAAVLIALVLAI
MLBr_00877|M.leprae_Br4923 ----------------------------------------------PVQD
Mflv_0270|M.gilvum_PYR-GCK -LTPVTTTSAPAAVPPATVTETASESATTTTEPTTTTTTTEP-----TTT
Mvan_0627|M.vanbaalenii_PYR-1 -LTPVTTTSAPAVVPPATVTETA--TATTTTEPVTTTTTTEP-----TTT
MSMEG_0700|M.smegmatis_MC2_155 -STTSTTPVTTSQVAPVAPVPTR--TVTETSTPAQTTVTETA-----TTT
TH_3309|M.thermoresistible__bu -LTPITPT------APATTATTA------ERVTETVTVTETS-----TVP
MMAR_0618|M.marinum_M -ATMTTTTPTTTTTAPTKTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
MUL_0583|M.ulcerans_Agy99 -ATMTTTTP-TTTTAPTKTTTTTTTTTTTTTTTTTTTTTTT------TTT
Mb0552|M.bovis_AF2122/97 TAPPTTPVTTSATTPPTTPPTTPVTTPPTTPPTTPVTTPPTTPPTTPVTT
Rv0538|M.tuberculosis_H37Rv TAPPTTPVTTSATTPPTTPPTTPVTTPPTTPPTTPVTTPPTTPPTTPVTT
MAB_4279|M.abscessus_ATCC_1997 ---STTSSTPADSGGGGHEGHGGHSGGGNTTVTETQTVPESPTSQDTTTT
MAV_4816|M.avium_104 NLLLTKSTQDRPTSPPSTPAPPQTVTITGPNDSTTVTVVPAPPPPSSEAP
MLBr_00877|M.leprae_Br4923 EITTVKPPPPSTETSTATETQTVTVTPLPPPSATSTAVPPSSVVPPPPTT
.. . :. ..
Mflv_0270|M.gilvum_PYR-GCK TTTTTPTTTTTPSTSVSTSTS----TSTVTQTETQTE------------T
Mvan_0627|M.vanbaalenii_PYR-1 TTTTT-TTTTTPSTSVSTSTS----TSTVTQTETQTE------------T
MSMEG_0700|M.smegmatis_MC2_155 PPTTTTTTTAPPTTSTTVETS----TSVVTSTVTETT------------T
TH_3309|M.thermoresistible__bu PTTTTVTTTTTPEPTVSTTVS----TTVSTTVSTTTV------------T
MMAR_0618|M.marinum_M TPTTTTTTTTAPTTTTTTTTNPMSPGAMPTFPSQLTP------------S
MUL_0583|M.ulcerans_Agy99 TPTTTTTTTTAPTTTTTTTTNPMSPGAMPTFPSQLTP------------S
Mb0552|M.bovis_AF2122/97 PPTTVAPTTVAPTTVAPTTVAPTTVAPATATPTTVAP------------Q
Rv0538|M.tuberculosis_H37Rv PPTTVAPTTVAPTTVAPTTVAPTTVAPATATPTTVAP------------Q
MAB_4279|M.abscessus_ATCC_1997 EPTTTTTTTTEPTTTTTQPTTTTTQPTTSTRPSVVVP------------I
MAV_4816|M.avium_104 PPPATTTTAPPEPSTTTTTTTPPPSSTTTTSAAPTTT------------A
MLBr_00877|M.leprae_Br4923 PTTTVTTLTGPRQVTYSVTGTKAPGDIISVTYVDASGRRRTQHNVYIPWS
..:. . : . .
Mflv_0270|M.gilvum_PYR-GCK VTEPPPAPPTP--------------------------------------
Mvan_0627|M.vanbaalenii_PYR-1 VTETP-APPAP--------------------------------------
MSMEG_0700|M.smegmatis_MC2_155 VPEEE-GGEQP--------------------------------------
TH_3309|M.thermoresistible__bu VTEPPPEGE----------------------------------------
MMAR_0618|M.marinum_M IPTVINLPPGL--------------------------------------
MUL_0583|M.ulcerans_Agy99 IPTVINLPPGL--------------------------------------
Mb0552|M.bovis_AF2122/97 PTQQPTQQPTQQMPTQQQTVAPQTVAPAPQPPSGGRNGSGGGDLFGGF-
Rv0538|M.tuberculosis_H37Rv PTQQPTQQPTQQMPTQQQTVAPQTVAPAPQPPSGGRNGSGGGDLFGGF-
MAB_4279|M.abscessus_ATCC_1997 PGGGNIQVPVGGQ------------------------------------
MAV_4816|M.avium_104 QPSTTSAAPTTTRVRPIPPIFQPPFGR----------------------
MLBr_00877|M.leprae_Br4923 MTVTPISQSDVGSVEAFSLFRVSKLNCLITTSDGTVLSSNSNDAPQTSC