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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0050 | sodC | - | 100% (295) | PROBABLE PERIPLASMIC SUPEROXIDE DISMUTASE |
| M. thermoresistible (build 8) | TH_0949 | sodC | 4e-59 | 56.25% (208) | PROBABLE PERIPLASMIC SUPEROXIDE DISMUTASE |
| M. thermoresistible (build 8) | TH_2748 | - | 3e-12 | 51.25% (80) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0440 | sodC | 1e-57 | 51.34% (224) | periplasmic superoxide dismutase |
| M. gilvum PYR-GCK | Mflv_0172 | - | 1e-63 | 53.62% (235) | superoxide dismutase, copper/zinc binding |
| M. tuberculosis H37Rv | Rv0432 | sodC | 1e-57 | 51.34% (224) | periplasmic superoxide dismutase |
| M. leprae Br4923 | MLBr_01925 | sodC | 2e-56 | 50.00% (232) | superoxide dismutase precursor (Cu-Zn) |
| M. abscessus ATCC 19977 | MAB_4184c | - | 2e-57 | 50.63% (237) | superoxide dismutase |
| M. marinum M | MMAR_0747 | sodC | 8e-57 | 50.63% (237) | periplasmic superoxide dismutase |
| M. avium 104 | MAV_4722 | sodC | 2e-59 | 50.88% (228) | superoxide dismutase, Cu-Zn |
| M. smegmatis MC2 155 | MSMEG_0835 | sodC | 3e-63 | 53.42% (234) | copper/zinc superoxide dismutase |
| M. ulcerans Agy99 | MUL_1379 | sodC | 5e-56 | 50.21% (237) | periplasmic superoxide dismutase |
| M. vanbaalenii PYR-1 | Mvan_0735 | - | 2e-61 | 54.55% (231) | superoxide dismutase, copper/zinc binding |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0747|M.marinum_M ---MPKPAGHRNVAAVTMSALSAT---ACVALLSGCSS-PQHASTVPGTT
MUL_1379|M.ulcerans_Agy99 ---MPKPAGHRNVAAVTMSALSAT---ACVALLSGCSS-PQHASTVPGTT
Mb0440|M.bovis_AF2122/97 ---MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSS-PQHASTVPGTT
Rv0432|M.tuberculosis_H37Rv ---MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSS-PQHASTVPGTT
MLBr_01925|M.leprae_Br4923 ---MSKLAGHRNVAAVTRSALSLSFVAACVALLSACIQ-NQPPATLPGTT
MAV_4722|M.avium_104 ---MPK-------------LLPPVVLAGCVVALGACSS-PQHASSLPGTT
Mflv_0172|M.gilvum_PYR-GCK ---MLRS-----------VAAAT-LFAVPALALSACSPPGEVPSDSPGTT
Mvan_0735|M.vanbaalenii_PYR-1 ---MLRS-----------VAAAT-LFAVPALALSACSPPGEVPSDSPGTT
MSMEG_0835|M.smegmatis_MC2_155 ---MLKP-----------VSVAV-LFATPVLALSACSPPGETASSEPGTT
MAB_4184c|M.abscessus_ATCC_199 MKPMVKP-----------AVLASGTLAAVALSLSGCSP-DQQASTTPGTT
TH_0050|M.thermoresistible__bu ---MTNPK-----QVPRPAIAAALAAPVALALLTGCQQDGQSAEDTTSPT
* . . * .* : . ...*
MMAR_0747|M.marinum_M PSVWTGSPAP--------AGTNEHREGASESEGLATQLRAPDGTEVATAK
MUL_1379|M.ulcerans_Agy99 PSVWTGSPAS--------AGTNEHREGASESEGLATQLRAPDGAEVATAK
Mb0440|M.bovis_AF2122/97 PSIWTGSPAP--------SGLSGHDEESPGAQSLTSTLTAPDGTKVATAK
Rv0432|M.tuberculosis_H37Rv PSIWTGSPAP--------SGLSGHDEESPGAQSLTSTLTAPDGTKVATAK
MLBr_01925|M.leprae_Br4923 PTVWTGSPAP--------SGMLGAEAESMGPPNIITRLNAPDGTQVATAK
MAV_4722|M.avium_104 PAVWTGSPSP--------SGAGAAEAAPAAAPSITTHLKAPDGTQVATAK
Mflv_0172|M.gilvum_PYR-GCK PSVWTGSPSPSAEAGE-HGAGHGGGSGQASGETLTAELNLADGTTVANAE
Mvan_0735|M.vanbaalenii_PYR-1 PPVWTGSPSPTAGPDE-QGSGHGSGT-QAGGETLTADLKLADGTTVATAD
MSMEG_0835|M.smegmatis_MC2_155 PAIWTGSPSPAAPSGEDHGGGHGAGA-AGAGETLTAELKTADGTSVATAD
MAB_4184c|M.abscessus_ATCC_199 PPVWTGSTAP-ATAGE-HGGHGGGEQPVPAGEKLNATLKLADGTPVATAA
TH_0050|M.thermoresistible__bu ----TTSPAP-------------------RGETISTELKTPDGRTVADAD
* *.:. : : * .** ** *
MMAR_0747|M.marinum_M FDFADGFATVTIVTTGTGYLAPGFHGVHIHKVGKCEANSAGPTGGPVGDF
MUL_1379|M.ulcerans_Agy99 FDFADGFATVTIVTTGTGYLAPGFHGVHIHKVGKCEANSAGPTGGPVGDF
Mb0440|M.bovis_AF2122/97 FEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNF
Rv0432|M.tuberculosis_H37Rv FEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNF
MLBr_01925|M.leprae_Br4923 FEFNNGFATITIATTGVGHLAPGFHGVHIHKVGKCEPSSAGPTGGAPGDF
MAV_4722|M.avium_104 FEFSNGYATVTIETTANGVLTPGFHGVHIHKVGKCEPSSVAPTGGAPGDF
Mflv_0172|M.gilvum_PYR-GCK IVFSDGYATVTVETTGEGDLTPGFHGMHIHQVGKCEPNSVAPTGGAPGNF
Mvan_0735|M.vanbaalenii_PYR-1 ITFSDGYATVTVEASGAGELTPGFHGIHIHSVGKCEADSVAPTGGAPADF
MSMEG_0835|M.smegmatis_MC2_155 FQFADGFATVTIETTTPGRLTPGFHGVHIHSVGKCEANSVAPTGGAPGDF
MAB_4184c|M.abscessus_ATCC_199 FVFQDGYARITVKTTQNGKLTPGFHGLHIHSFKKCEANSVAPAGGAPGDF
TH_0050|M.thermoresistible__bu IEFTDGYATITVETTESGILSPGFHGLHIHEIGKCEANSVAPGGGEPGDF
: * :*:* :*: :: * *:*****:***.. ***..*..* ** .:*
MMAR_0747|M.marinum_M LSAGGHLQVSGRPVPGQSSGDLTSLQVRSDGSGTLVTTTDAFTMDDLTSG
MUL_1379|M.ulcerans_Agy99 LSAGGHLQVSGRPVPGQSSGDLTSLQVRSDGSGTLVTTTDAFTMDDLTSG
Mb0440|M.bovis_AF2122/97 LSAGGHYHVPG-HTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSG
Rv0432|M.tuberculosis_H37Rv LSAGGHYHVPG-HTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSG
MLBr_01925|M.leprae_Br4923 LSAGGHFQVPG-HTVEPASGNLTSLQVRKDGIGTLVTTTDAFTMNDLLAG
MAV_4722|M.avium_104 LSAGGHFQAPG-HTGEPASGDLTSLQVRKDGSGTLVTTTDAFTMEDLLGG
Mflv_0172|M.gilvum_PYR-GCK NSAGGHLQVGG-NTGHPASGDLTSLQVREDGSAKVVTTTDAFTAEDLTGD
Mvan_0735|M.vanbaalenii_PYR-1 NSAGGHFQVSG-HSGHPASGDLSSLQVREDGSAKLVTTTDAFTKEDLLDG
MSMEG_0835|M.smegmatis_MC2_155 NSAGGHFQVSG-HSGHPASGDLSSLQVRADGSGKLVTTTDAFTAEDLLDG
MAB_4184c|M.abscessus_ATCC_199 LSAGGHFNVPG-YTGHPSSGDLVSLNILKDGSGELVTTADSFTKEDLLAG
TH_0050|M.thermoresistible__bu LSAGGHLHMRG-DTPHPGTGDLTPLEVRSDGSARLVATTDSLTIEDLRGS
***** : * .:*:* .*:: ** . :*:*:*::* :** .
MMAR_0747|M.marinum_M QKTAIIIHAGADNFANIPADRYNQTNGTAGPDQTTLATGDAGKRVACGVI
MUL_1379|M.ulcerans_Agy99 QKTAIIIHAGADNFANIPADRYNQTNGTAGPDQTTLATGDAGKRVACGVI
Mb0440|M.bovis_AF2122/97 AKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI
Rv0432|M.tuberculosis_H37Rv AKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI
MLBr_01925|M.leprae_Br4923 QKTAIIIHAGADNFGNIPPERYSQVNGTPGPDATTISTGDAGKRVACGVI
MAV_4722|M.avium_104 QKTAIIIHAGADNFANIPAERYNQTNGTPGPDEMTMSTGDAGKRVACGVI
Mflv_0172|M.gilvum_PYR-GCK AGTAIIIHEKADNFANIPPERYQQVDGAPPPDQTTLATGDAGARVACGVI
Mvan_0735|M.vanbaalenii_PYR-1 AGTALIIHEKADNFANIPPERYQQVNGAPPPDQTTLATGDAGARVACGVI
MSMEG_0835|M.smegmatis_MC2_155 AKTAIIIHEKADNFANIPPERYQQVNGAPGPDQTTMATGDAGSRVACGVI
MAB_4184c|M.abscessus_ATCC_199 NGTAIIIHEKSDNFANIPAERYTQANGASGPDDTTKSTGDAGKRVACGLI
TH_0050|M.thermoresistible__bu QGSALMLHERPDNFANIPP-RYT-VNGAPGPDAETLATGDAGSRIACGAL
:*:::* .***.***. ** .:*:. ** * :***** *:*** :
MMAR_0747|M.marinum_M GSG-----------------------------------------------
MUL_1379|M.ulcerans_Agy99 GSG-----------------------------------------------
Mb0440|M.bovis_AF2122/97 GSG-----------------------------------------------
Rv0432|M.tuberculosis_H37Rv GSG-----------------------------------------------
MLBr_01925|M.leprae_Br4923 GAD-----------------------------------------------
MAV_4722|M.avium_104 GAG-----------------------------------------------
Mflv_0172|M.gilvum_PYR-GCK TGS-----------------------------------------------
Mvan_0735|M.vanbaalenii_PYR-1 TGG-----------------------------------------------
MSMEG_0835|M.smegmatis_MC2_155 SAG-----------------------------------------------
MAB_4184c|M.abscessus_ATCC_199 DAG-----------------------------------------------
TH_0050|M.thermoresistible__bu AAASAQATPTTETTTITETAPGGPPAGTAPPATEPPGTTGPPATTESPQT
.
MMAR_0747|M.marinum_M ----------------------------
MUL_1379|M.ulcerans_Agy99 ----------------------------
Mb0440|M.bovis_AF2122/97 ----------------------------
Rv0432|M.tuberculosis_H37Rv ----------------------------
MLBr_01925|M.leprae_Br4923 ----------------------------
MAV_4722|M.avium_104 ----------------------------
Mflv_0172|M.gilvum_PYR-GCK ----------------------------
Mvan_0735|M.vanbaalenii_PYR-1 ----------------------------
MSMEG_0835|M.smegmatis_MC2_155 ----------------------------
MAB_4184c|M.abscessus_ATCC_199 ----------------------------
TH_0050|M.thermoresistible__bu TTTTAETTVTTPPTTTVTTTVPEGEGPG