For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3083 | - | - | 100% (211) | - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1356 | - | 4e-19 | 30.24% (205) | LysR family transcriptional regulator |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2680c | - | 1e-09 | 30.72% (153) | LysR family transcriptional regulator |
| M. marinum M | MMAR_4157 | - | 4e-06 | 29.45% (163) | LuxR family transcriptional regulator |
| M. avium 104 | MAV_1538 | - | 2e-06 | 28.14% (167) | transcriptional regulator, LysR family protein |
| M. smegmatis MC2 155 | MSMEG_5654 | - | 5e-17 | 32.81% (192) | transcriptional regulator, LysR family protein |
| M. ulcerans Agy99 | MUL_4020 | - | 6e-06 | 29.45% (163) | LuxR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_1027 | - | 2e-14 | 30.00% (200) | LysR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5654|M.smegmatis_MC2_155 ----------------------------MRHLRCFVVLAEELHFGRAAQR
Mvan_1027|M.vanbaalenii_PYR-1 -------------------------MFSLARLSCFVAVAEELHFGRAAER
Mflv_1356|M.gilvum_PYR-GCK MVSAVTGRPTNDPPHTWRHRTIKEPPMELRHLRYFLAVAETCHFGQAAEQ
MMAR_4157|M.marinum_M --------------------------MELYQLRYFQAVAECGTLRGASEQ
MUL_4020|M.ulcerans_Agy99 --------------------------MELYQLRYFQAVAECGTLRGASEQ
MAV_1538|M.avium_104 --------------------------MAVGDYEWFITLAELQHVTAAAEQ
TH_3083|M.thermoresistible__bu --------------------------------------------------
MAB_2680c|M.abscessus_ATCC_199 -------------------MDQWTSQLAPQLRALVELAAHDGHMTQAALT
MSMEG_5654|M.smegmatis_MC2_155 LHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQTLLPEARRILRD
Mvan_1027|M.vanbaalenii_PYR-1 LHMTQPPLSRQVQQLENELGVQLIDRTTRNVTLTPAGAAFLPDARRILQL
Mflv_1356|M.gilvum_PYR-GCK LHIAQPALSYAIRQLENSLDATLFTRTTRHVALTPAGEFLRVEATRILNG
MMAR_4157|M.marinum_M LLVSQSAVSRAITLLEAEIGVQLFTRRGRTNELNRYGQALLVGSRLAQRS
MUL_4020|M.ulcerans_Agy99 LLVSQSAVSRAITLLEAEIGVQLFTRRGRTNELNRYGQALLVGSRLAQRS
MAV_1538|M.avium_104 LHVAQPTLTRMLARLEQRLGVALFDRHGRRLSLNTYGRIFYEHARRAQLE
TH_3083|M.thermoresistible__bu --------------------------------------------------
MAB_2680c|M.abscessus_ATCC_199 LGIPQSSMSRRIHALQAALGVPLLIHDGRTVRLTPEARLLAARTREPLAE
MSMEG_5654|M.smegmatis_MC2_155 ADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSIRL
Mvan_1027|M.vanbaalenii_PYR-1 AEGAAQTVKRIPAGDLGTVVVGFTAASAHAVLPRLLERARERLPDVKLDL
Mflv_1356|M.gilvum_PYR-GCK VDAAQRGVRRIAAGRSGLLRLGLTGTAAFSHLPKIARIVRQELPAVALDI
MMAR_4157|M.marinum_M VSSAIDNVRELAGVSGGTVALGFLHSLGMQTVPHLIRLHHSRFPQARFEL
MUL_4020|M.ulcerans_Agy99 VSSAIDNVRELAGVSGGTVALGFLHSLGMQTVPHLIRLHHSRFPQARFEL
MAV_1538|M.avium_104 LDSARRAIADLADPAVGEIRLAYLSSFGSTVVPRLIARFKESSPRVTFTL
TH_3083|M.thermoresistible__bu ------------------VRITFPGMSTHPHVARLARVVRSQRPGIRLEL
MAB_2680c|M.abscessus_ATCC_199 LDHTLSEVTGDADPERGTVRFGFPLTMGSGHIPDLLAAFRHRHPGIRVLL
: . :. : : * . :
MSMEG_5654|M.smegmatis_MC2_155 E-EGTTAQQLEWLRDQRITVGLGRTPIDD--PAVSTVVLARESLVLAVPD
Mvan_1027|M.vanbaalenii_PYR-1 R-EMVTAAQIEGLMTGELDLGMARPPLKR--PGLVSRPLLHEQLLAALPE
Mflv_1356|M.gilvum_PYR-GCK HADLLTPDQCEGLRTGALDVGVLRPPAVG--GDVATRTIAAEPLVLAVSA
MMAR_4157|M.marinum_M H-QRSGQGVLSDLVSGVTDVSLSFPAAFEGYGEIAWQTLFTQQLYAVVST
MUL_4020|M.ulcerans_Agy99 H-QRSGQGVLSDLVSGVTDVSLSFPAAFEGYGEIAWQTLFTQQLYAVVST
MAV_1538|M.avium_104 E-EGAAESIADRVRSGGVDIGVVSPRPVER--TLAWRSLFRQRLGVAVPD
TH_3083|M.thermoresistible__bu SSQNFAQPAMQKLVRSETDIALGRWDLIP--ADVSSRIVMRDELVVALPE
MAB_2680c|M.abscessus_ATCC_199 K-QAHGSELGAQLLTGDLDLAVVIPAPER----LHHITIGAQHIHIAVPE
: : :.: : : : : .:.
MSMEG_5654|M.smegmatis_MC2_155 SHALSG-AESAELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVV
Mvan_1027|M.vanbaalenii_PYR-1 GHPLADMTRELTLIDLDGQDFVMYSPVQARYFNELLISTFTIAGTTPRYV
Mflv_1356|M.gilvum_PYR-GCK DHRLAA-EPVVSLADLRSEPFIGYT-GQDSAVNDAVTRSCRAAGFVPHRE
MMAR_4157|M.marinum_M DHPLAG-RRLIRFPELAAYPFVVLD--RDHTLRRIVDAACARHGIDPTLA
MUL_4020|M.ulcerans_Agy99 DHPLAG-RRLIRFPELAAYPFVVLD--RDHTLRRIVDAACARHGIDPTPA
MAV_1538|M.avium_104 GHRFAR-GAAVSMVDLADEPFVTMH--PGFGMRRLLDELCAAAQFRPRVA
TH_3083|M.thermoresistible__bu DHALAG-RGRVSAGELAGESFVSLPPYEGSVLPDRLRRLAHANGFVPEVV
MAB_2680c|M.abscessus_ATCC_199 DHRLAG-AAQVRLRELSGETFIANP--PSYNLRQLTERWCREAGYAPNVT
.* :: * *: . *
MSMEG_5654|M.smegmatis_MC2_155 YETVRMQTIVGLVSGGLGVALVPESVRNLGRKGVRYVHLAD---APP-AI
Mvan_1027|M.vanbaalenii_PYR-1 QYVTQVHTMLVLVRSGIGIALVPASAATLHPEGVVFRTIGA---FRERPV
Mflv_1356|M.gilvum_PYR-GCK HSAPGTAVLLALVAADLGVSVVPASVRALPLHGVVFRDLVD---GGT--V
MMAR_4157|M.marinum_M FEGTDVGTLRGLIGANLGVGVLPQATARP---ADIIEIAID---DAQLVR
MUL_4020|M.ulcerans_Agy99 FEGTDVGTLRGLIGANLGVGVLPQATARP---ADIIEIAID---DAQLVR
MAV_1538|M.avium_104 LQAPNLTTAASLVAAGLGISLVPIDGSSYP--SGVSVKPLA---DADAYR
TH_3083|M.thermoresistible__bu QIAPDTQTALALVSAQVGCHLTFASVARNATDPHVVFVPLEGAAEADVDV
MAB_2680c|M.abscessus_ATCC_199 IEVTEFSTIRELIGRGLGVALLPHDDRALP--GIREIPLAG----DGYHR
. *: :* :
MSMEG_5654|M.smegmatis_MC2_155 ELSMMWRNDCESP---HLQPLRKTARHL-----------
Mvan_1027|M.vanbaalenii_PYR-1 ELDAVWRGDSTNP---ALLRVLKDVLPQQEWTT------
Mflv_1356|M.gilvum_PYR-GCK DLALAWRDGVDNPVVDAVVAVLAGALTSLDHPALQEQS-
MMAR_4157|M.marinum_M PIAIGWIADRCLP--SSAVAFRETALGCYGHRVSAAGV-
MUL_4020|M.ulcerans_Agy99 PIAIGWIADRCLP--SSAVAFRETAFGCYGHRDSAAGV-
MAV_1538|M.avium_104 DVGMIWDSGRPLPRSARDFIAGAAAVGHGGW--------
TH_3083|M.thermoresistible__bu DLRAAWRRDDRSPAVHAVLECLFDDAGVENR--------
MAB_2680c|M.abscessus_ATCC_199 AIALAWGTATRAAPTRRLNDFLLQHFSQAEVNSAAIRKG
: * .