For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2813 | - | - | 100% (408) | - |
| M. thermoresistible (build 8) | TH_4350 | - | 3e-41 | 30.41% (434) | PUTATIVE putative conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_3688 | - | 1e-38 | 29.98% (437) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1679c | PE_PGRS30 | 2e-07 | 24.83% (286) | PE-PGRS family protein |
| M. gilvum PYR-GCK | Mflv_1343 | - | 1e-15 | 24.74% (380) | hypothetical protein Mflv_1343 |
| M. tuberculosis H37Rv | Rv1651c | PE_PGRS30 | 2e-07 | 24.83% (286) | PE-PGRS family protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2973 | - | 4e-12 | 26.74% (273) | PE-PGRS family protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5578 | - | 1e-20 | 27.42% (434) | hypothetical protein MSMEG_5578 |
| M. ulcerans Agy99 | MUL_1639 | - | 3e-10 | 28.84% (319) | PE-PGRS family protein |
| M. vanbaalenii PYR-1 | Mvan_3971 | - | 6e-30 | 31.46% (391) | hypothetical protein Mvan_3971 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1679c|M.bovis_AF2122/97 --------------------------------------------------
Rv1651c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_1639|M.ulcerans_Agy99 --------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 MCLIEPARITISAFLNALMLRRSMTSRQLRERSGKSDSLRFFSGSFRCAR
Mb1679c|M.bovis_AF2122/97 -------------MSFLLVEPDLVTAAAANLAGIRSALS----EAAAAAS
Rv1651c|M.tuberculosis_H37Rv -------------MSFLLVEPDLVTAAAANLAGIRSALS----EAAAAAS
MUL_1639|M.ulcerans_Agy99 -------------MSFLLVQPEMVSAATESLTAIRSALG----EVSAAVA
MMAR_2973|M.marinum_M -------------MSFLTVLPDMVATSAENLVDVCSTLG----VANAAAA
TH_2813|M.thermoresistible__bu -----------VHAAPTAVAPVDLAAESNPLVALTQLFQ----NTTGNVG
Mflv_1343|M.gilvum_PYR-GCK -----------MRAGVRSCLTASVALVGAGAIAITPVNP----LTTDVLP
Mvan_3971|M.vanbaalenii_PYR-1 -----------MHVAVRSPLATGVALVGAGAIALTPVHPS--LPDISVPA
MSMEG_5578|M.smegmatis_MC2_155 AHIRTAYEGIFMEVAARSRLLAGAAIIGAGALVAAPIQPVPDVIAAPVIQ
. :
Mb1679c|M.bovis_AF2122/97 TPTTALASAGADEVSAAVSRLFGAYGQQFQALNARAATFHAEFVSLLNGG
Rv1651c|M.tuberculosis_H37Rv TPTTALASAGADEVSAAVSRLFGAYGQQFQALNARAATFHAEFVSLLNGG
MUL_1639|M.ulcerans_Agy99 GPTTAVVAAAGDEVSAAISQVFGAYGQEFQALNAQAAAFQAEFEGLLSGG
MMAR_2973|M.marinum_M VPTTGIAAAASDEVSTAIATLFGSYAQEYQTLSARAAAFHDEFVSVLKGS
TH_2813|M.thermoresistible__bu GLVNQILADPAPILEQLVANQIAN-VEYLRTLASTIGELLPDLIEGVRTS
Mflv_1343|M.gilvum_PYR-GCK ITQHAVSLAAVPNPIQLYSQVFQRSLDNAGALAQQYFADPFPITGAILRN
Mvan_3971|M.vanbaalenii_PYR-1 VSSMAVQLTAQPNPIALWTEVFAGAINNIGGLGEDLLSDPFPVLNQILRN
MSMEG_5578|M.smegmatis_MC2_155 SATPAVEMTALVNPIELWSAVISQAIANTGAIANTVLENPIPIAHKVIDN
: : : : . : .
Mb1679c|M.bovis_AF2122/97 AAAYTGAEAASVS----SMQALLDAVNAPTQTLLGRPLIGNGADGVAGTG
Rv1651c|M.tuberculosis_H37Rv AAAYTGAEAASVS----SMQALLDAVNAPTQTLLGRPLIGNGADGVAGTG
MUL_1639|M.ulcerans_Agy99 AAAYVSAEALNSSVFGPPMQELLKVVNAPTQMLLGRSLIADGAN-----A
MMAR_2973|M.marinum_M GAAYLSAEVANAE------QNLIKTVNAPARALLGHPLIP----------
TH_2813|M.thermoresistible__bu LGMFVEQIQAGNFIG-------AGQTLGQILVFAGLPLLG--------VI
Mflv_1343|M.gilvum_PYR-GCK QGVAVADALAALQAG------DSEAFVAAATDVVLEPFRG----------
Mvan_3971|M.vanbaalenii_PYR-1 QFGYLQTIGEAGKG----IIDGLVEYASPDNPFGLQAGIRDAVAQFKAGD
MSMEG_5578|M.smegmatis_MC2_155 QLITADVLTSFVALFGEGFVASAGGVPAALQSAVEQILAG----------
.
Mb1679c|M.bovis_AF2122/97 SNAGGNGGPGGILYGNGGNGGAGGPDGGAGGNGGAAGLIGNGGAGGAGGV
Rv1651c|M.tuberculosis_H37Rv SNAGGNGGPGGILYGNGGNG-------GAGGNGGAAGLIGNGGAGGAGGA
MUL_1639|M.ulcerans_Agy99 TAAGGDGRPGGILMGKGGDG-------------------------APGGP
MMAR_2973|M.marinum_M TDGSATAGPGTGVIGTAGLR-------------------------TVDAV
TH_2813|M.thermoresistible__bu SAPLGLLQNSTQNLANAAAQLPN----------------------VVGSV
Mflv_1343|M.gilvum_PYR-GCK -TGAALSHLGALLNQPYAVEG-----------------------------
Mvan_3971|M.vanbaalenii_PYR-1 IGAAFTTLASTVITGPIIVGAGLP-------------------LLMSGLL
MSMEG_5578|M.smegmatis_MC2_155 EIYSGVENYAIAILTPVVEGALG----------------------ALGQL
.
Mb1679c|M.bovis_AF2122/97 GGAGGAGGAGGTGGLLYGNGGAGGNGGSAAAAGGAGGNALLFGNGGNGGS
Rv1651c|M.tuberculosis_H37Rv GGAGGAGGAGGTGGLLYGNGGAGGNGGSAAAAGGAGGNALLFGNGGNGGS
MUL_1639|M.ulcerans_Agy99 GQPGGNGGAAG---------------------------------------
MMAR_2973|M.marinum_M ATAVRSGANAT---------------------------------------
TH_2813|M.thermoresistible__bu LFPTLLP-------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 EVPVKMAQN-----------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 DDISAVLQN-----------------------------------------
Mb1679c|M.bovis_AF2122/97 GASGGAAGHAGTIFGNGGNAGAGSGLAGADGGLFGNGGDGGSSTSKAGGA
Rv1651c|M.tuberculosis_H37Rv GASGGAAGHAGTIFGNGGNAGAGSGLAGADGGLFGNGGDGGSSTSKAGGA
MUL_1639|M.ulcerans_Agy99 --------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 GGNALFGNGGDGGSSTVAAGGAGGNTLVGNGGAGGAGGTSGLTGSGVAGG
Rv1651c|M.tuberculosis_H37Rv GGNALFGNGGDGGSSTVAAGGAGGNTLVGNGGAGGAGGTSGLTGSGVAGG
MUL_1639|M.ulcerans_Agy99 --------------------------LIGTGGAGGKGAPS----------
MMAR_2973|M.marinum_M --------------------------LGRVTAAESVVAAS----------
TH_2813|M.thermoresistible__bu --------------------------IMGTINATFDAAQS----------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------FTDAVAALLNPTTAVP--------
MSMEG_5578|M.smegmatis_MC2_155 -------------------------PFLNAANVVGTVVSVPT--------
Mb1679c|M.bovis_AF2122/97 AGGSVGLWGSGGAGGDGGAATSLLGVGMNAGAGGAGGNAGLLYGNGGAGG
Rv1651c|M.tuberculosis_H37Rv AGGSVGLWGSGGAGGDGGAATSLLGVGMNAGAGGAGGNAGLLYGNGGAGG
MUL_1639|M.ulcerans_Agy99 ------------------------------MPGGLGGRGGLLWGDGGKGG
MMAR_2973|M.marinum_M -------------------------------ATRVASAATLLPG------
TH_2813|M.thermoresistible__bu -------------------------------ISDAFGEG-----------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 AGGNGGDTTVPLFDSGVGGAGGAGGNASLFGNGGTGGVGGKGGTSSDLAS
Rv1651c|M.tuberculosis_H37Rv AGGNGGDTTVPLFDSGVGGAGGAGGNASLFGNGGTGGVGGKGGTSSDLAS
MUL_1639|M.ulcerans_Agy99 DGG------APVYDA-----------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 ATSGAGGAGGAGGVGGLLYGNGGNGGAGGIGGAAINILANAGAGGAGGAA
Rv1651c|M.tuberculosis_H37Rv ATSGAGGAGGAGGVGGLLYGNGGNGGAGGIGGAAINILANAGAGGAGGAA
MUL_1639|M.ulcerans_Agy99 ------------------WG---------------YLLAEAGTGGAGGLP
MMAR_2973|M.marinum_M -----------------------------------HVAASVESVSAS---
TH_2813|M.thermoresistible__bu -----------------------------------DFLTALGVALST---
Mflv_1343|M.gilvum_PYR-GCK -----------------------------------FFLIAISPVLAG---
Mvan_3971|M.vanbaalenii_PYR-1 -----------------------------------LITAALGPILGP---
MSMEG_5578|M.smegmatis_MC2_155 -----------------------------------LIGAGLPILFEALS-
.
Mb1679c|M.bovis_AF2122/97 GSSFIGNGGNGGAGGAGGAAALFSSGVGGAGGSGGTALLLGSGGAGGNGG
Rv1651c|M.tuberculosis_H37Rv GSSFIGNGGNGGAGGAGGAAALFSSGVGGAGGSGGTALLLGSGGAGGNGG
MUL_1639|M.ulcerans_Agy99 G-------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 TGGANSGSLFASPGGTGGAGGHGGAGGLIWGNGGAGGNGGNGGTTADGAL
Rv1651c|M.tuberculosis_H37Rv TGGANSGSLFASPGGTGGAGGHGGAGGLIWGNGGAGGNGGNGGTTADGAL
MUL_1639|M.ulcerans_Agy99 --------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 EGGTGGIGGTGGSAIAFGNGGQGGAGGTGGDHSGGNGIGGKGGASGNGGN
Rv1651c|M.tuberculosis_H37Rv EGGTGGIGGTGGSAIAFGNGGQGGAGGTGGDHSGGNGIGGKGGASGNGGN
MUL_1639|M.ulcerans_Agy99 --------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 AGQVFGDGGTGGTGGAGGAGSGTKAGGTGSDGGHGGNATLIGNGGDGGAG
Rv1651c|M.tuberculosis_H37Rv AGQVFGDGGTGGTGGAGGAGSGTKAGGTGSDGGHGGNATLIGNGGDGGAG
MUL_1639|M.ulcerans_Agy99 ---IFG--------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
TH_2813|M.thermoresistible__bu --------------------------------------------------
Mflv_1343|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 --------------------------------------------------
Mb1679c|M.bovis_AF2122/97 GAGGAGSPAGAPGNGGTGGTGGVLFGQSGSSGPPGAAALAFPSLSSSVPI
Rv1651c|M.tuberculosis_H37Rv GAGGAGSPAGAPGNGGTGGTGGVLFGQSGSSGPPGAAALAFPSLSSSVPI
MUL_1639|M.ulcerans_Agy99 ---------GLPGVAGAWG---------GEVPTALAAPMALSAAASSPAA
MMAR_2973|M.marinum_M ----------LPAS---------------LASLSLLGSTAAPAAQATVDI
TH_2813|M.thermoresistible__bu -----------------------------PIIVKDALLNGFAGGPGLLTA
Mflv_1343|M.gilvum_PYR-GCK ------------------------------VAATQRAFEEVIDALVGFDL
Mvan_3971|M.vanbaalenii_PYR-1 ------------------------------FSALGASVQDFVEALGSGDV
MSMEG_5578|M.smegmatis_MC2_155 -----------------------------PILQVGLTAQGVYDGVTAGDL
Mb1679c|M.bovis_AF2122/97 LG-PYEDLIANTVANLASIGNTWLADPAPFLQQYLANQFGYGQ-LTLTAL
Rv1651c|M.tuberculosis_H37Rv LG-PYEDLIANTVANLASIGNTWLADPAPFLQQYLANQFGYGQ-LTLTAL
MUL_1639|M.ulcerans_Agy99 VGGAYQTLFDNTWTNLQAIGATWNADPAPFLSQFIANQQTYAN-TVFTSL
MMAR_2973|M.marinum_M AA-PYQELIENTAANLQSLGSTWAANPAPFLSQILANQLGYGQ-TIATSL
TH_2813|M.thermoresistible__bu DG-PLSALIAARNLIARALTPIPPTGPDPVPPPMTLGAG-----ASVVSL
Mflv_1343|M.gilvum_PYR-GCK VG----AAYAVLNIPGRVIDGVLNGVPGASFGILEDLPGLLSP-LSETGL
Mvan_3971|M.vanbaalenii_PYR-1 LDAITTVINVPAKLVGAALNGFTDEGGNFFAGILTVSDDPFSAGLLQTLL
MSMEG_5578|M.smegmatis_MC2_155 EAVANALISFPSDMAGTILNGNPTIGNSGLLGSELGLIPSLLTVRQSIAD
:
Mb1679c|M.bovis_AF2122/97 TDATRDFAIGLAGIPPSLQSALQALAAGDVSGAVTDVLGAVVKVFVSGVD
Rv1651c|M.tuberculosis_H37Rv TDATRDFAIGLAGIPPSLQSALQALAAGDVSGAVTDVLGAVVKVFVSGVD
MUL_1639|M.ulcerans_Agy99 SNSVQDFGAGLVALPAAYQGAFQALMTGNVSGAVEILGKGYLGLVFNGFD
MMAR_2973|M.marinum_M QNAAQDLGAVLYDPSALNR-------------------------------
TH_2813|M.thermoresistible__bu SVDAADHSLEAASSPLADKD------------------------------
Mflv_1343|M.gilvum_PYR-GCK PPGPIAVGTSLDQD------------------------------------
Mvan_3971|M.vanbaalenii_PYR-1 VTVPRAVAAALGAEDAPAR-------------------------------
MSMEG_5578|M.smegmatis_MC2_155 AIQPPAVSTLVGAKMESAP-------------------------------
.
Mb1679c|M.bovis_AF2122/97 ASDLSNILLLGPVGDLFPILSIPGAMSQNFTNVVMTVTDTTIAFSIDTTN
Rv1651c|M.tuberculosis_H37Rv ASDLSNILLLGPVGDLFPILSIPGAMSQNFTNVVMTVTDTTIAFSIDTTN
MUL_1639|M.ulcerans_Agy99 YTNVPVVTVQGALGDLLPMTTIPGQISQNMTNVLQTVTDTSIMANISLLN
MMAR_2973|M.marinum_M -----------ALADLSPISAIGGQIQQNLINLGGTALTD----------
TH_2813|M.thermoresistible__bu -------------SKDAKAPVESGDVAATTVTASITAADDTGGNG-----
Mflv_1343|M.gilvum_PYR-GCK ------------MGAAIPPREPATGVGDVPDLAAATITLD----------
Mvan_3971|M.vanbaalenii_PYR-1 --------------VAGALDEVSSPISEPAAAVTVSVTETDSATT-----
MSMEG_5578|M.smegmatis_MC2_155 -----------EVNSFTFTVDEDGELGEVTKSTTESGTTEGNGIQ-----
: :
Mb1679c|M.bovis_AF2122/97 LTGVMTFGLPLAMTLNAVGSPITTAIAFAESTTAFVSAVQAGNLQAAAAA
Rv1651c|M.tuberculosis_H37Rv LTGVMTFGLPLAMTLNAVGSPITTAIAFAESTTAFVSAVQAGNLQAAAAA
MUL_1639|M.ulcerans_Agy99 PS--FTTGFPLTLALDALGAPIVTGQAALQSATTFIDAVQAGDVAGAFGA
MMAR_2973|M.marinum_M --------VAPAVAFVAAGPALSTLQGFGISLNAFTTAVQSGDIAGALGA
TH_2813|M.thermoresistible__bu -------DGRTEAEKADADGTDTDSSDRAESLVTETGLEGADGVTGGTGD
Mflv_1343|M.gilvum_PYR-GCK -----------ADEVPAEDSGRSDADDAPAEDTTETEGTDEESGDSADAE
Mvan_3971|M.vanbaalenii_PYR-1 -------EVDSATEVPAAEPEETPTAPAEEAPVEEAPAEERADTSAEDG-
MSMEG_5578|M.smegmatis_MC2_155 --------AIAAKSADAEDDATTGTGTETEPEKSEKPVEKSKKPLVTLGN
.
Mb1679c|M.bovis_AF2122/97 LVGAPANVANGFLNGEARLPLALPTSAT---GGIPVTVEVPVGGILAPLQ
Rv1651c|M.tuberculosis_H37Rv LVGAPANVANGFLNGEARLPLALPTSAT---GGIPVTVEVPVGGILAPLQ
MUL_1639|M.ulcerans_Agy99 IVDAPAVIANGFLNGEETITLDLPTYLSPISGTESLTSAIPIGGILTPLQ
MMAR_2973|M.marinum_M LVDAPAVLANGFLNGGVTLPLLLPIGLG------FVVLDVPFDGILVAPH
TH_2813|M.thermoresistible__bu TVNGATNLSDGNKAGPSTAALTAADSSS--------------NNKLGATK
Mflv_1343|M.gilvum_PYR-GCK SSEGGAEPAEGGAEGAEAESGQAAPART----------------------
Mvan_3971|M.vanbaalenii_PYR-1 AVQGDAEVTDGEPVVDEAADGDDAPTSDDT--------------------
MSMEG_5578|M.smegmatis_MC2_155 KFSPTTTAGDKARPGQRAEAALKSIGNEVN---------KTVKKIGDGVK
: : .
Mb1679c|M.bovis_AF2122/97 PFQATAVIPVIG---PVT--VTLEGTPAGGIVPALVNYAPTQLAQAIAP-
Rv1651c|M.tuberculosis_H37Rv PFQATAVIPVIG---PVT--VTLEGTPAGGIVPALVNYAPTQLAQAIAP-
MUL_1639|M.ulcerans_Agy99 PVESTIVFRVLPHTPPVTQHITLGGTEFGGLIPGLQS-ASAQLADAIKLS
MMAR_2973|M.marinum_M ATTATVTWFLPYFQEVVS------GPTVGGIVSTLLTSVPQELATAITPA
TH_2813|M.thermoresistible__bu PRP---------------------GVKKAGANASAASSSDSGDE------
Mflv_1343|M.gilvum_PYR-GCK -------------------------SAKPDSTRSDRTRADAGTSDTE---
Mvan_3971|M.vanbaalenii_PYR-1 ------------------------EADDAGADEGTPSDTSAGDADSTDSS
MSMEG_5578|M.smegmatis_MC2_155 KALG------------------VKGKKKADSKASSSSKDSAGSED-----
. .
Mb1679c|M.bovis_AF2122/97 --
Rv1651c|M.tuberculosis_H37Rv --
MUL_1639|M.ulcerans_Agy99 --
MMAR_2973|M.marinum_M --
TH_2813|M.thermoresistible__bu --
Mflv_1343|M.gilvum_PYR-GCK --
Mvan_3971|M.vanbaalenii_PYR-1 AA
MSMEG_5578|M.smegmatis_MC2_155 --