For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2602 | - | - | 100% (198) | - |
| M. thermoresistible (build 8) | TH_2719 | - | 1e-09 | 26.74% (172) | PUTATIVE - |
| M. thermoresistible (build 8) | TH_2336 | - | 6e-08 | 27.87% (122) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1561 | - | 1e-08 | 43.64% (55) | transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_0414 | - | 2e-08 | 26.56% (128) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv1534 | - | 1e-08 | 43.64% (55) | transcriptional regulator |
| M. leprae Br4923 | MLBr_02568 | - | 2e-08 | 25.56% (180) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_4360c | - | 6e-52 | 50.53% (188) | transcriptional regulator TetR |
| M. marinum M | MMAR_0500 | - | 7e-10 | 25.52% (192) | TetR family transcriptional regulator |
| M. avium 104 | MAV_4919 | - | 6e-09 | 25.87% (201) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_4449 | - | 3e-11 | 31.41% (156) | putative transcriptional regulator |
| M. ulcerans Agy99 | MUL_1163 | - | 3e-10 | 25.52% (192) | TetR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_0257 | - | 3e-09 | 27.34% (128) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1561|M.bovis_AF2122/97 MSRASARRRRAVSDEDKSQRRDEILAAAKIVFAHKGFHATTVADIAKQAG
Rv1534|M.tuberculosis_H37Rv MSRASARRRRAVSDEDKSQRRDEILAAAKIVFAHKGFHATTVADIAKQAG
TH_2602|M.thermoresistible__bu VPRNNQTVPKAE-------REAAVLMRAVELFKAYGYRATSIAAVAKAAG
MAB_4360c|M.abscessus_ATCC_199 MPRNRQQIPRAE-------RESAILEQAVELFAANGYRGTSVAAVGRAAG
MMAR_0500|M.marinum_M MAGGTKRLPRAI-------REQQMLDAAVQMFSANGYHETSMDTIAAAAQ
MUL_1163|M.ulcerans_Agy99 MAGGTKRLPRAI-------REQQMLDAAVQMFSANGYHETSMDTIAAAAQ
MAV_4919|M.avium_104 MAGGTKRLPRAV-------REQQMLDAAVQMFSVNGYHETSMDAIAAQAQ
MLBr_02568|M.leprae_Br4923 MAGGAKRIPRAV-------REQQMLDAAVQMFSVNGYHKTSMDAIAAEAQ
Mflv_0414|M.gilvum_PYR-GCK MAGGTKRLPRAV-------REQQMLDAAVEIFSVNGYHETSMDAIAAEAQ
Mvan_0257|M.vanbaalenii_PYR-1 MAGGTKRLPRAV-------REQQMLDAAVEIFSVNGYHETSMDAIAAEAQ
MSMEG_4449|M.smegmatis_MC2_155 MNGIEEDVMAPKRPQAAAEKRAEIVAAARRLFIDAGYDATPMSRLAKEAG
: . :. :: * :* *: *.: :. *
Mb1561|M.bovis_AF2122/97 LAYGLIYWYFDSKDDLFHALMAGEEEALRAHVAAELARVGGSTEAPLRAL
Rv1534|M.tuberculosis_H37Rv LAYGLIYWYFDSKDDLFHALMAGEEEALRAHVAAELARVGGSTEAPLRAL
TH_2602|M.thermoresistible__bu LAPAAVHWYFPTKDDLFAAVLRHMIGETQRRIESDPD-----VAGDPYLE
MAB_4360c|M.abscessus_ATCC_199 VAPAAVHWYYPTKDDLFAAAVTSIFDSVRERVEADPS-----INGEPYGE
MMAR_0500|M.marinum_M ISKPMLYLYYGSKEDLFGACLNREMSRFIDAVRADID-----LSQSPKDL
MUL_1163|M.ulcerans_Agy99 ISKPMLYLYYGSKEDLFGACLNREMSRFIDAVRADID-----LSQSPKDL
MAV_4919|M.avium_104 ISKPMLYLYYGSKEDLFGACLNRELGRFIDAVRADID-----FQQSPNDM
MLBr_02568|M.leprae_Br4923 ISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADID-----FTQSPKDL
Mflv_0414|M.gilvum_PYR-GCK ISKPMLYLYYGSKEELFGACLHRELTRFVDEVNSNID-----FTAPPKEL
Mvan_0257|M.vanbaalenii_PYR-1 ISKPMLYLYYGSKEELFGACLNRELGRFVDEVNSNID-----FSAAPKEL
MSMEG_4449|M.smegmatis_MC2_155 VAPNTIYWYFPDKDEVLIAVLEAVMADVWPQYEEIAS-------QPIAAR
:: :: *: *:::: * :
Mb1561|M.bovis_AF2122/97 LQAAVQATFEFFETDKATVKLLFRDAYALGGRFEEHLGGIYERFIDDIEA
Rv1534|M.tuberculosis_H37Rv LQAAVQATFEFFETDKATVKLLFRDAYALGGRFEEHLGGIYERFIDDIEA
TH_2602|M.thermoresistible__bu LTTFLDLLAPYRSLHREAYERMDDSA-ALHAVYTETHDWLQERLMAVVSP
MAB_4360c|M.abscessus_ATCC_199 LVALLSESQSYRNLHREAYERMEGSE-AVRAAYEHVQSWLDERLLAAIAQ
MMAR_0500|M.marinum_M LRNAIVSFLRYIDQNQASWIVMYTQA-VSSQAFAQTVREGREQIVELVAG
MUL_1163|M.ulcerans_Agy99 LRNAIVSFLRYIDQNQASWIVMYTQA-VSSQAFAQTVREGREQIVELVAG
MAV_4919|M.avium_104 LRNTIASFMRYIDANRASWIVMYTQA-TSSQAFAHMVREGREQIIELVAG
MLBr_02568|M.leprae_Br4923 LRNTIVSFLRYIDANRASWIVMYIQA-MSLPAFAQTVREARDQITELVAG
Mflv_0414|M.gilvum_PYR-GCK LRTAVLAFLNYIDANRASWMVLYTQA-TSSQAFAHTVREGRERIIEIVGR
Mvan_0257|M.vanbaalenii_PYR-1 LRTAVLAFLKYIDANRASWMVLYTQA-TSSQAFAHTVREGRERIIELVGR
MSMEG_4449|M.smegmatis_MC2_155 LLWIVGKLTEMSRLVTTVHARVEHSA--AVAEWHQNFHTITGSLLQFELQ
* : : . : . :
Mb1561|M.bovis_AF2122/97 VVVAAQRRGEVVEAPSRMAAYTLAALVGQLAHRRLNTDDNVTAAQVADFV
Rv1534|M.tuberculosis_H37Rv VVVAAQRRGEVVEAPSRMAAYTLAALVGQLAHRRLNTDDNVTAAQVADFV
TH_2602|M.thermoresistible__bu ELPADVD-----------PAHVVD--VANFFFEGLLVSV-RRVDKPAAHY
MAB_4360c|M.abscessus_ATCC_199 RNRGGVN-----------SELVAD--AAHVLFEGILISS-RRLDRSAGEL
MMAR_0500|M.marinum_M MLRAGTRSPRSDAEIDMMAAALVG--AGEAVANRLSAGD-TDVDEAAEMM
MUL_1163|M.ulcerans_Agy99 MLRAGTRSPRSDAEIDMMAAALVG--AGEAVANRLSAGD-TDVDEAAEMM
MAV_4919|M.avium_104 LMRAGSRTPRTDREHEMMAVALVG--AGEAVANRLSTGD-IDVDEAAALM
MLBr_02568|M.leprae_Br4923 LMRVGTRSSRPDHEYEIMAGALVG--AGEAMATRLTTGD-IAVDEAAELM
Mflv_0414|M.gilvum_PYR-GCK LLRSGTRFPEPDTDFDMMAVALVG--AGEAIASRVSTGD-ADVHEASELM
Mvan_0257|M.vanbaalenii_PYR-1 LLRSGTKFPEPDTDFELMAVALVG--AGEAIASRVSTGD-ADVDEAAELM
MSMEG_4449|M.smegmatis_MC2_155 AAG--------------VPAPDAEVMIGVFTVEGLLMHD-HDEAQQRAII
. . : .
Mb1561|M.bovis_AF2122/97 VSLVLDGLRPRALAVG------ARGGRAART------
Rv1534|M.tuberculosis_H37Rv VSLVLDGLRPRALAVG------ARGGRAART------
TH_2602|M.thermoresistible__bu IDLVTSAVVGAAAARP-------RSGQQHPA------
MAB_4360c|M.abscessus_ATCC_199 IGLVVDALVAVAVTKR-------GS------------
MMAR_0500|M.marinum_M IDLFWRGLKGAPSDRE------IGSNFAAG-------
MUL_1163|M.ulcerans_Agy99 IDLLWRGLKGAPSDRE------IGSNFAAG-------
MAV_4919|M.avium_104 IDLFWYGLKGSPEERE------AAAAQPEADRSGAGG
MLBr_02568|M.leprae_Br4923 INLFWHGLKGAPADRD------FGPSIVAG-------
Mflv_0414|M.gilvum_PYR-GCK INLFWRGLKGSPSAASDRDADATDATAVITS------
Mvan_0257|M.vanbaalenii_PYR-1 INLFWLGLKGAPSAAD------VDATAVISS------
MSMEG_4449|M.smegmatis_MC2_155 DALASRWTTNLPRPSD--------LGR----------
* .