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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2549 | - | - | 100% (172) | - |
| M. thermoresistible (build 8) | TH_3105 | - | 4e-07 | 32.35% (136) | PUTATIVE - |
| M. thermoresistible (build 8) | TH_1095 | - | 3e-06 | 32.69% (104) | Probable hypothetical membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1265c | - | 7e-12 | 31.85% (135) | hypothetical protein Mb1265c |
| M. gilvum PYR-GCK | Mflv_3589 | - | 4e-42 | 49.71% (171) | hypothetical protein Mflv_3589 |
| M. tuberculosis H37Rv | Rv1233c | - | 9e-12 | 33.33% (117) | hypothetical protein Rv1233c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2634 | - | 1e-33 | 45.22% (157) | hypothetical protein MAB_2634 |
| M. marinum M | MMAR_4208 | - | 5e-12 | 35.09% (114) | proline and glycine rich transmembrane protein |
| M. avium 104 | MAV_1372 | - | 3e-14 | 33.09% (139) | hypothetical protein MAV_1372 |
| M. smegmatis MC2 155 | MSMEG_3229 | - | 6e-45 | 52.69% (167) | hypothetical protein MSMEG_3229 |
| M. ulcerans Agy99 | MUL_1750 | - | 2e-07 | 36.36% (99) | proline and glycine rich transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_2826 | - | 2e-48 | 53.49% (172) | hypothetical protein Mvan_2826 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3589|M.gilvum_PYR-GCK -----------------------------------------MSEPPLPPP
Mvan_2826|M.vanbaalenii_PYR-1 -----------------------------------------MSEP---PP
MSMEG_3229|M.smegmatis_MC2_155 --MFAVPAVSRWREGSLTDMTDERAGEPGSDRPEPTESSGQPSDPGQTPP
TH_2549|M.thermoresistible__bu -----------------------------------------MTEPDKPSV
MAB_2634|M.abscessus_ATCC_1997 -----------------------------------------MTET---PP
Mb1265c|M.bovis_AF2122/97 ---MTAPSGSSGESAHDAAGGPPPVGERPPEQPIA---DAPWAPP-ASSP
Rv1233c|M.tuberculosis_H37Rv ---MTAPSGSSGESAHDAAGGPPPVGERPPEQPIA---DAPWAPP-ASSP
MMAR_4208|M.marinum_M ---MTAPGGSFDEGAHDGAASPPP-GEQPSEQPFSPPPDAPWAAPEAASP
MAV_1372|M.avium_104 MNTMTAPGAGFGESAQHDHHGDQAHGDKPNDDATS----APHAQPAPWEP
MUL_1750|M.ulcerans_Agy99 ---MSQPPENPGNQADPQDGDQSTPGYPPP----------PNYGTPPPPP
.
Mflv_3589|M.gilvum_PYR-GCK P--------------------PPGTY---------------------PGG
Mvan_2826|M.vanbaalenii_PYR-1 P--------------------PPGSY---------------------PGG
MSMEG_3229|M.smegmatis_MC2_155 PTRSGESTESSDTASPPPESNPPYTYGASQGAYDTASQAPYGTAPQAPYG
TH_2549|M.thermoresistible__bu P-------------------EQPQPN---------------------PYG
MAB_2634|M.abscessus_ATCC_1997 P---------------------PPPY------------------------
Mb1265c|M.bovis_AF2122/97 M------------ADHPPPAYPPSGYPP----------------------
Rv1233c|M.tuberculosis_H37Rv M------------ANHPPPAYPPSGYPP----------------------
MMAR_4208|M.marinum_M A------------DDYPAPSYPPPAYPPEP------------------VG
MAV_1372|M.avium_104 P------------AGSVPPPYPPPGYPA----------------------
MUL_1750|M.ulcerans_Agy99 P------------PGYGAPPAGPPGYGAP---------------------
*
Mflv_3589|M.gilvum_PYR-GCK ---YPPQPYGGYPGPYS-----PQPY------------PVAPKNGLGTAS
Mvan_2826|M.vanbaalenii_PYR-1 ---YPPQPYGAYPPAYP-----TQPYGG-----YPPSPPTAPKNGLGTAA
MSMEG_3229|M.smegmatis_MC2_155 SQPYGSQPYGAYPGAYPG--SYPPPYGGGYPAQPPAQGAAGPRNGLGIAA
TH_2549|M.thermoresistible__bu ------QPPGGYPVPPP-----PPPYGG---YPGHPAAPTAPQNGLGIAA
MAB_2634|M.abscessus_ATCC_1997 ------QPAGGYPPPFP----YPYPYGAP----GVPVPPPAPKNGLGLSA
Mb1265c|M.bovis_AF2122/97 --AYQPGYPTDYPPPMP-----PGGYAPPG-----YPPPGTSSAGYGDIP
Rv1233c|M.tuberculosis_H37Rv --AYQPGYPTGYPPPMP-----PGGYAPPG-----YPPPGTSSAGYGDIP
MMAR_4208|M.marinum_M PGGYPPDYATGYPP--P-----PG-YPPPG-----YPPYGAAAGEYGGTP
MAV_1372|M.avium_104 --DYPPGYPPPYPPPAPS----PVPPPPPG-----YGPP--PPPGYGPPG
MUL_1750|M.ulcerans_Agy99 --PPPPGYGTPPPPPPPGYGQAPGGYAPPG-----YNPPPPPPPGYGPPP
* . . . *
Mflv_3589|M.gilvum_PYR-GCK LVVAIIS-------------------------------------------
Mvan_2826|M.vanbaalenii_PYR-1 LVLAIVGLL-----------------------------------------
MSMEG_3229|M.smegmatis_MC2_155 LIAAIAGLV-----------------------------------------
TH_2549|M.thermoresistible__bu LVVAIVALL-----------------------------------------
MAB_2634|M.abscessus_ATCC_1997 LVIGIVSVL-----------------------------------------
Mb1265c|M.bovis_AF2122/97 YPPMPPP-------YGGSP-------------------------------
Rv1233c|M.tuberculosis_H37Rv YPPMPPP-------YGGSP-------------------------------
MMAR_4208|M.marinum_M YPPPPPPPAPMAAPYGAPPPNYPPP-------------------------
MAV_1372|M.avium_104 YPGGYYP---------GPD-------------------------------
MUL_1750|M.ulcerans_Agy99 AGYSTQPG------FGGPAKPPFSVGEAISWAWNRFTQNAMALVVPIVIY
Mflv_3589|M.gilvum_PYR-GCK --MFTLYGGVILG------VVAVVLGFLGRGRVKRGEAN-----------
Mvan_2826|M.vanbaalenii_PYR-1 -LCWTVAGGVLLG------IAAIVMGFVARGRVKRGEAT-----------
MSMEG_3229|M.smegmatis_MC2_155 -LCWSIIGGLIVG------VVAIVLGFLGHGRAKRGEAT-----------
TH_2549|M.thermoresistible__bu -FFWSVLGGIVGG------IVAVILGVLARGRVKRGEAT-----------
MAB_2634|M.abscessus_ATCC_1997 -LSCTVFGGLFGG------LVAVVLGIAGLLRVKRAVAD-----------
Mb1265c|M.bovis_AF2122/97 -------GGYYP----------EPGYLDGYGPSQPGMNT-----------
Rv1233c|M.tuberculosis_H37Rv -------GGYYP----------EPGYLDGYGPSQPGMNT-----------
MMAR_4208|M.marinum_M ----SYPGGYYP----------PPDPMAGYGPALPGMNT-----------
MAV_1372|M.avium_104 ------YGGYPP----------QPPLLGG----QPGTNG-----------
MUL_1750|M.ulcerans_Agy99 GLILSAVGGVMVGLFFAFSDRTSTTYTDAYGNTSETVNMTMSPLASIVMF
** .
Mflv_3589|M.gilvum_PYR-GCK ----------------------------------------NGGVALAGIV
Mvan_2826|M.vanbaalenii_PYR-1 ----------------------------------------NGGVALAGIV
MSMEG_3229|M.smegmatis_MC2_155 ----------------------------------------NGGVAIAGIV
TH_2549|M.thermoresistible__bu ----------------------------------------NGGVATAGIV
MAB_2634|M.abscessus_ATCC_1997 ----------------------------------------NRGVAIAGIA
Mb1265c|M.bovis_AF2122/97 ----------------------------------------MALVSLISAL
Rv1233c|M.tuberculosis_H37Rv ----------------------------------------MALVSLISAL
MMAR_4208|M.marinum_M ----------------------------------------MAIVALVSSL
MAV_1372|M.avium_104 ----------------------------------------LAIASLIASF
MUL_1750|M.ulcerans_Agy99 IGYLAVFAVVLFMHAGITTGCLDIADGKPVTIGSFFKPRNLGMVILTGLL
. .
Mflv_3589|M.gilvum_PYR-GCK LGALSIVVAIAAIIITAIFGWQLFQDVGGN-----DYIDCLNRAGSDQ--
Mvan_2826|M.vanbaalenii_PYR-1 LGAVAIVASLVIVAIYATLGVTLFKDLGGG-----DYLDCLQRAGNDQ--
MSMEG_3229|M.smegmatis_MC2_155 LGGIAVVLSLAFIAIWATLGFKWFEELGGR-----EYIACLEDAGNDQ--
TH_2549|M.thermoresistible__bu LGVLAVLAGVASIAIYVAL----FNEVGGA-----DYVSCVRDAGNDD--
MAB_2634|M.abscessus_ATCC_1997 LGSLAVLLSATILVFTLVF----MKSAGLN-----DFISCLSDVKGDQ--
Mb1265c|M.bovis_AF2122/97 VGVLCCIGSIVGIVFGAIA------------------INQIKQTREEG--
Rv1233c|M.tuberculosis_H37Rv VGVLCCIGSIVGIVFGAIA------------------INQIKQTREEG--
MMAR_4208|M.marinum_M VGVFCCIGSVVAIVVGTIA------------------INQIKQTREDG--
MAV_1372|M.avium_104 TGLLCGIGSVVAIVLGAIA------------------LDQIKRTRQDG--
MUL_1750|M.ulcerans_Agy99 VIVLTAIGSVLCIVPGLIFGFLAQFAIIAAVDRSLSPIDSIKSSCATVRA
. : . : : :
Mflv_3589|M.gilvum_PYR-GCK --------------AAVEQCANEFTQRVENEFSITVTPTP----------
Mvan_2826|M.vanbaalenii_PYR-1 --------------QAVQECADEFTQRVEESFSITVTPTP----------
MSMEG_3229|M.smegmatis_MC2_155 --------------AAQERCRVQFEERVEDEFGTPQSR------------
TH_2549|M.thermoresistible__bu --------------AALQECEQRFRDRLEDRLGVTLEPNP----------
MAB_2634|M.abscessus_ATCC_1997 --------------AKATQCQNDFEKRMNEKAGTSKP-------------
Mb1265c|M.bovis_AF2122/97 ------------YGLAVAGIVIGIATLLVYMIAGIFAIP-----------
Rv1233c|M.tuberculosis_H37Rv ------------YGLAVAGIVIGIATLLVYMIAGIFAIP-----------
MMAR_4208|M.marinum_M ------------YGLAVAGIVIAVATLLIYLVVGIFSIPSH---------
MAV_1372|M.avium_104 ------------FGLAVAGIVIGIATLVVTLVVVLFALHTH---------
MUL_1750|M.ulcerans_Agy99 ELGNTALSWLVQYAVVLAGELLCFVGMLVGVPVASLIQTYTWRKLSGGQV
. :
Mflv_3589|M.gilvum_PYR-GCK ---------------------------
Mvan_2826|M.vanbaalenii_PYR-1 ---------------------------
MSMEG_3229|M.smegmatis_MC2_155 ---------------------------
TH_2549|M.thermoresistible__bu ---------------------------
MAB_2634|M.abscessus_ATCC_1997 ---------------------------
Mb1265c|M.bovis_AF2122/97 ---------------------------
Rv1233c|M.tuberculosis_H37Rv ---------------------------
MMAR_4208|M.marinum_M ---------------------------
MAV_1372|M.avium_104 ---------------------------
MUL_1750|M.ulcerans_Agy99 VELSQPGPPAGLPPGPPPGAPPGPQFG