For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2509 | - | - | 100% (254) | - |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3410 | - | 2e-05 | 29.57% (186) | hypothetical protein Mb3410 |
M. gilvum PYR-GCK | Mflv_4417 | - | 5e-06 | 27.23% (202) | HAD family hydrolase |
M. tuberculosis H37Rv | Rv3376 | - | 2e-05 | 29.57% (186) | hypothetical protein Rv3376 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_0437 | - | 2e-06 | 26.49% (151) | hydrolase |
M. smegmatis MC2 155 | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1937 | - | 2e-05 | 30.61% (98) | HAD family hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4417|M.gilvum_PYR-GCK --------MSTQSVSPAVLFDIDGTLVDSNYLHVHAWMRAFDDEN--LPV Mvan_1937|M.vanbaalenii_PYR-1 ----MPRPMSIEKPSPAVLFDVDGTLVDSNYLHVYAWLRAFDAES--VPV MAV_0437|M.avium_104 --------------------------MDSNYLHVHSWQRAFDDED--IAV Mb3410|M.bovis_AF2122/97 ------------MSISAVVFDRDGVLTSFDWTRAEEDVRRITGLP--LEE Rv3376|M.tuberculosis_H37Rv ------------MSISAVVFDRDGVLTSFDWTRAEEDVRRITGLP--LEE TH_2509|M.thermoresistible__bu LTFDRESPQPDRPGIRGVVFDKDGTLFDFTRTWTPWCEQLVGELSGGDPG . . : . Mflv_4417|M.gilvum_PYR-GCK SAWRIHRCIG-------MDGTTLVR---------TLSGDAGQGVLDRLKD Mvan_1937|M.vanbaalenii_PYR-1 DSWRIHRCIG-------MDGTTLVR---------ALAGDASERVLDTLKD MAV_0437|M.avium_104 ASWQIHRCIG-------MDGSTLVR---------TLSGDAPDDVGERLRD Mb3410|M.bovis_AF2122/97 IERRWGGWLNGLTIDDAFVETQPIS---------EFLSSLARELELGSKA Rv3376|M.tuberculosis_H37Rv IERRWGGWLNGLTIDDAFVETQPIS---------EFLSSLARELELGSKA TH_2509|M.thermoresistible__bu LARRLGAALGFDLELRMFEPDSVVLTDTIQAVVKTLLGVLPPDTDADRLF : :. : : : . Mflv_4417|M.gilvum_PYR-GCK AHSRYYKENSSLLAPLPGARDLLRRVAATGLQV-VLATSAPDDELTLLRE Mvan_1937|M.vanbaalenii_PYR-1 RHSEFYRETASLLAPLPGARDLLRRVAGLGLQV-VLATSAPEDELRMLRE MAV_0437|M.avium_104 RHSRYYRELTPLLKPLPGARAMLRRVADLGLQV-VLASSAPEDELEILRK Mb3410|M.bovis_AF2122/97 RDELVRLDYMAFAQGYPDARPALEEARRRGLKVGVLTNNSLLVSARSLLQ Rv3376|M.tuberculosis_H37Rv RDELVRLDYMAFAQGYPDARPALEEARRRGLKVGVLTNNSLLVSARSLLQ TH_2509|M.thermoresistible__bu RHVDDSIATRSPAQVVP-LRPLLERLRSAGIVLGLATNDQKKSTLRHLQQ . . * * *.. *: : : :.. * : Mflv_4417|M.gilvum_PYR-GCK VLDCDDVVAAVTSSADVDTAKPKPDIVQVALDRAGVGAQDAVFVGDAVWD Mvan_1937|M.vanbaalenii_PYR-1 VLDCDDAVAAVTSSQDVDTAKPQPDIVAVALDRAGVTADDAVFVGDAVWD MAV_0437|M.avium_104 VLDCDDVIAATTSSRDVDTAKPEPGIVRVALDRAGVRAEEAVFVGDAVWD Mb3410|M.bovis_AF2122/97 CAALHDLVDVVLSSQMIGAAKPDPRAYQAIAEALGVSTTSCLFFDDIADW Rv3376|M.tuberculosis_H37Rv CAALHDLVDVVLSSQMIGAAKPDPRAYQAIAEALGVSTTSCLFFDDIADW TH_2509|M.thermoresistible__bu AG-IDSCLSFVADADSGHGIKPGPGMLVAFCEHTGLSPQHCAMVGDSVFD .. : . .: ** * . : *: . . :..* . Mflv_4417|M.gilvum_PYR-GCK CEAAGRAGVTSIGLLSGGVSRGELREAGAAGVFEDAGDLLAKLDSTVIGD Mvan_1937|M.vanbaalenii_PYR-1 CEAARRAGVPSIGVLSGGVSRAELREAGARDVFEDAAELLTELDSTVVGE MAV_0437|M.avium_104 AHAARGAGLACIGLCSGGIARDELRAAGADPVFADPQDLLDHLESTRIAA Mb3410|M.bovis_AF2122/97 VEGARCAGMRAYLVDRSGQTR--------DGVVRDLSSLGAILDGAGP-- Rv3376|M.tuberculosis_H37Rv VEGARCAGMRAYLVDRSGQTR--------DGVVRDLSSLGAILDGAGP-- TH_2509|M.thermoresistible__bu MLAAQSANFLRIGVCSGPTPAERLX----XXLLRTGRPWVPVCWHREHTS .* *.. : . . :. Mflv_4417|M.gilvum_PYR-GCK LAARVSDPR Mvan_1937|M.vanbaalenii_PYR-1 LAGRVSG-- MAV_0437|M.avium_104 LARGG---- Mb3410|M.bovis_AF2122/97 --------- Rv3376|M.tuberculosis_H37Rv --------- TH_2509|M.thermoresistible__bu DRGGRRGSR