For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2449 | - | - | 100% (443) | putative conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_0574 | - | 1e-41 | 29.04% (396) | conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_0424 | - | 4e-06 | 19.37% (444) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3764 | - | 1e-06 | 21.69% (378) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_0954 | - | 1e-05 | 20.00% (385) | hypothetical protein Mflv_0954 |
| M. tuberculosis H37Rv | Rv3737 | - | 1e-06 | 21.69% (378) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0256c | - | 1e-110 | 48.56% (418) | hypothetical protein MAB_0256c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3837 | - | 1e-35 | 28.10% (420) | hypothetical protein MSMEG_3837 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2449|M.thermoresistible__bu -----------------------------------MTRLPPAPLRDRITR
MAB_0256c|M.abscessus_ATCC_199 -----------------------------------MTALP---RRGRALA
Mb3764|M.bovis_AF2122/97 --------MDQDRS----------------DNT-ALRRGLRIALRGRRDP
Rv3737|M.tuberculosis_H37Rv --------MDQDRS----------------DNT-ALRRGLRIALRGRRDP
Mflv_0954|M.gilvum_PYR-GCK MLPSPMVPSRQPRTPVPFRRASVSWPPMEPDSTPRFRRGLRIAMRGRRDP
MSMEG_3837|M.smegmatis_MC2_155 --------------------------------------------------
TH_2449|M.thermoresistible__bu ALRALQKDAPAALAEPDAYDDAEVAAMLRQIGIALVEIQQPTQLVRDRLL
MAB_0256c|M.abscessus_ATCC_199 LVRKTLKDKPVPLADARHFPDAEVVTMLRMLGIAMLEVGQPTNLVLAKLH
Mb3764|M.bovis_AF2122/97 LPVAGRRSR-TSGGIGD-LHTRKVLDLTIRLAEVMLSSGSGTADVVATAQ
Rv3737|M.tuberculosis_H37Rv LPVAGRRSR-TSGGIDD-LHTRKVLDLTIRLAEVMLSSGSGTADVVATAQ
Mflv_0954|M.gilvum_PYR-GCK ATGAGQRSR-RPQNTSDERHTRKVLDLTVRLAEVMLSAGSGSADVVATAQ
MSMEG_3837|M.smegmatis_MC2_155 ---------------MTEPIAAQQIRFITRLGAAMGAAHYPVSLIRQMLD
: : :. .: :
TH_2449|M.thermoresistible__bu HIARRYTTKEVRVVVLPTVLLIQIGAET----HEIESSTRG-TTQLDLAG
MAB_0256c|M.abscessus_ATCC_199 DIAPQYTDKELRAVVLPTVLIIQIDGVTGQ--LEVEESTRN-TAQLDQAG
Mb3764|M.bovis_AF2122/97 DVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSRLA
Rv3737|M.tuberculosis_H37Rv DVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSRLA
Mflv_0954|M.gilvum_PYR-GCK DVAQAYRLNDCVVDVFVTTVFVSAPPTTESPAVTIVRSVRARSTDYSRLA
MSMEG_3837|M.smegmatis_MC2_155 RASSAYGVRNDFIALPNYVQVVGPTGAHG---TIVEAAHLDHELRFAQMF
: * : : . .: : :
TH_2449|M.thermoresistible__bu RVDAVAELAGAGAITPRDAIAALSDARSMRHRFGPARTILGYVLTTLGFG
MAB_0256c|M.abscessus_ATCC_199 HIDAIADMAVVGAIAPADAIARIYEIRCLKPRFGTVLTVVGHTILTLGFG
Mb3764|M.bovis_AF2122/97 ELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALGVA
Rv3737|M.tuberculosis_H37Rv ELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALGVA
Mflv_0954|M.gilvum_PYR-GCK ALDELVRRITSGGVSVDQAHDAMDELSERPHPYPRWVATAGWAGFALGIA
MSMEG_3837|M.smegmatis_MC2_155 PLARLVRDAMRGAVRPDDGEAQLDRVLEMPDRFPGWVAVVGYGVQSAGLA
: :. *.: :. : : : * : *..
TH_2449|M.thermoresistible__bu ILINPTWASLPWYVLLGALVGVILTISSSLPALTPVAPAVAAMVVTALSA
MAB_0256c|M.abscessus_ATCC_199 LALAPTSSALPAYLVLGLIVGVLMLATNPMPTLAATMPAVAAFVVTVIST
Mb3764|M.bovis_AF2122/97 MLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAV
Rv3737|M.tuberculosis_H37Rv MLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAV
Mflv_0954|M.gilvum_PYR-GCK ILLGGNWLVCLLAAATSAVIDQTGRRLNRAGTPLFFQQVAGALIATLVAV
MSMEG_3837|M.smegmatis_MC2_155 LVLEPTALNLLVATVLGFLVGLFHVVVQRAGMLQHLLPAVSAFTVTAICL
: : . . ::. . . .* .* :.
TH_2449|M.thermoresistible__bu GFIAEAANDN-LLRVISPPLVAILPGMSLTIGAMELASSAVIAGASRLMY
MAB_0256c|M.abscessus_ATCC_199 LIVANVPSEG-LARVLAPALIAVLPGMTLTIGALELTSTQLMAGSTRIVY
Mb3764|M.bovis_AF2122/97 AAYLIAGQD--PTALVATGIVVLLSGMTLVGSMQDAVTGYMLTALARLGD
Rv3737|M.tuberculosis_H37Rv AAYLIAGQD--PTALVATGIVVLLSGMTLVGSMQDAVTGYMLTALARLGD
Mflv_0954|M.gilvum_PYR-GCK AAYRLAGLG--PTALVATGIVMLLSGMTLVGSVQDALTGYMITAAARLGE
MSMEG_3837|M.smegmatis_MC2_155 LGAHRLGMDHVNLRALIPPLAMFLPGAAITLAVVELTARDVISGTSRLIA
: . : .*.* ::. . : : :::. :*:
TH_2449|M.thermoresistible__bu GLTQLVLLLFGVTLGLSLIDHRSAQQ---MSPLMGEWTFYPAIVVIGIGI
MAB_0256c|M.abscessus_ATCC_199 GIAQLMLLALGVVIGVKVAGPPQPSP---LGPPLGSWTIALAVPVIAVGF
Mb3764|M.bovis_AF2122/97 ALFLTAGIVVGILISLRGVTNAGIQI---ELHVDATTTLATPGMPLPILV
Rv3737|M.tuberculosis_H37Rv ALFLTAGIVVGILISLRGVTNAGIQI---ELHVDATTTLATPGMPLPILV
Mflv_0954|M.gilvum_PYR-GCK VLFLTAGIVVGILAGLQVASLAGITI---ELQVDATEIMVLPNQPASIAW
MSMEG_3837|M.smegmatis_MC2_155 GFVQIAQLAFGILIATQFLGVDGSSLSTDAVNKIGPWAPWLGVLVYAIGV
: : .*: . . :
TH_2449|M.thermoresistible__bu YLYLSGPPGSLLWLT-----AAVGVALVGQQVGELFTSPAHAGALG----
MAB_0256c|M.abscessus_ATCC_199 YLYKSAPRGSLIWLV-----LAIGVAMLGQRLGSLFLAPAMTGFVG----
Mb3764|M.bovis_AF2122/97 AVSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVA
Rv3737|M.tuberculosis_H37Rv AVSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVA
Mflv_0954|M.gilvum_PYR-GCK AVFGATVAGACLTIASYARLRAVATAGLAAGLAELVLIALWSGGLGSVIA
MSMEG_3837|M.smegmatis_MC2_155 LLFLAPPLSFLPWLV-----VICYTAFAAQYLGGTVLGSYASGFCG----
: : . :. .* . :. . :. *
TH_2449|M.thermoresistible__bu ---ALLTVPFAVIAARIRSSPPAIVMLLAAFWSLVPGALSFESLGEAATD
MAB_0256c|M.abscessus_ATCC_199 ---AVAVVPFALFAARFKGAPSAIVLLLAAFWCLVPGALSFVNVSEVAAT
Mb3764|M.bovis_AF2122/97 TWTAAIGVGFLATLISIRRQAPALVTATAGIMPMLPGLAVFRAVFAFAVN
Rv3737|M.tuberculosis_H37Rv TWTAAIGVGFLATLISIRRQAPALVTATAGIMPMLPGLAVFRAVFAFAVN
Mflv_0954|M.gilvum_PYR-GCK TGCAAVGVGFLATLISIRRQAPALVTATAGITPMLPGMAVFRAVFYFAVE
MSMEG_3837|M.smegmatis_MC2_155 ---GLVLTVSALAISRRRGAPPTITLILPGFWLLVPGSMGLIGVTELFGA
. . : ..::. ..: ::** : :
TH_2449|M.thermoresistible__bu DAID--VRALGSAVAAILSIALGTLVGWSLYTTWTARLRRVNADSADTSN
MAB_0256c|M.abscessus_ATCC_199 GHAN--LTALLDTCMAIFSIALGLLVGASLHRGMRYALTVSR--------
Mb3764|M.bovis_AF2122/97 DTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGP
Rv3737|M.tuberculosis_H37Rv DTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGP
Mflv_0954|M.gilvum_PYR-GCK KDFAAGMTQAMVAAATALAIGAGVVMGELLGSPLRYRAGRIGQFLQVQGP
MSMEG_3837|M.smegmatis_MC2_155 DGDS----AFPATVISMISVALGLQAGLVLWQLLRLRRSTAPQRAAR---
: : :::. * * *
TH_2449|M.thermoresistible__bu --------------------------------------------------
MAB_0256c|M.abscessus_ATCC_199 --------------------------------------------------
Mb3764|M.bovis_AF2122/97 PGLRRAVGRVVRLQPAKSQQPT-GTGGQRWRSVALEPTTADDVDAGYRGD
Rv3737|M.tuberculosis_H37Rv PGLRRAVGRVVRLQPAKSQQPT-GTGGQRWRSVALEPTTADDVDAGYRGD
Mflv_0954|M.gilvum_PYR-GCK PGLRRAVGRVVRLGPAEDQDATPASPYQRSWSVALEPLPAEPALEGSHTD
MSMEG_3837|M.smegmatis_MC2_155 --------------------------------------------------
TH_2449|M.thermoresistible__bu ------------
MAB_0256c|M.abscessus_ATCC_199 ------------
Mb3764|M.bovis_AF2122/97 WPATCTSATEVR
Rv3737|M.tuberculosis_H37Rv WPATCTSATEVR
Mflv_0954|M.gilvum_PYR-GCK TPGTEDAPDAT-
MSMEG_3837|M.smegmatis_MC2_155 ------------