For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2432 | - | - | 100% (253) | short chain dehydrogenase |
M. thermoresistible (build 8) | TH_3170 | - | 2e-33 | 35.94% (256) | PUTATIVE short-chain type dehydrogenase/reductase |
M. thermoresistible (build 8) | TH_3898 | - | 8e-33 | 35.08% (248) | PUTATIVE short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3579c | - | 1e-109 | 75.10% (249) | short chain dehydrogenase |
M. gilvum PYR-GCK | Mflv_1491 | - | 1e-106 | 80.52% (231) | short chain dehydrogenase |
M. tuberculosis H37Rv | Rv3549c | - | 1e-109 | 75.10% (249) | short chain dehydrogenase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 1e-28 | 34.35% (230) | 3-oxoacyl- |
M. abscessus ATCC 19977 | MAB_0607 | - | 1e-92 | 66.67% (249) | short chain dehydrogenase |
M. marinum M | MMAR_5037 | - | 1e-108 | 74.30% (249) | short-chain type dehydrogenase/reductase |
M. avium 104 | MAV_0611 | - | 1e-121 | 86.89% (244) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6000 | - | 1e-120 | 83.94% (249) | short chain dehydrogenase |
M. ulcerans Agy99 | MUL_4111 | - | 1e-108 | 74.30% (249) | short chain dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_5265 | - | 1e-115 | 80.72% (249) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mb3579c|M.bovis_AF2122/97 -----MTLAEAADAINFGLAGRVVLVTGGVRGVGAGISSVFAEQGATVIT Rv3549c|M.tuberculosis_H37Rv -----MTLAEAADAINFGLAGRVVLVTGGVRGVGAGISSVFAEQGATVIT MMAR_5037|M.marinum_M -----MTRAAAAQAINLGLAGRVVLVTGGVRGVGAGISSVFAEQGATVIT MUL_4111|M.ulcerans_Agy99 -----MTRAEAAQAINLGLVGRVVLVTGGVRGVGAGISSVFAEQGATVIT TH_2432|M.thermoresistible__bu --------------VNLGLTGRVVLVTGGVRGVGAGISAVFADQGATVVT MAV_0611|M.avium_104 ----------------------MVLVTGGVRGVGAGISSVFAAQGATVVT Mflv_1491|M.gilvum_PYR-GCK --------------------------------MGAGISRVFADQGATVIT Mvan_5265|M.vanbaalenii_PYR-1 ---MTDAVDSARRGIALGLTGRVVLVTGGVRGVGAGISKVFADQGATVVT MSMEG_6000|M.smegmatis_MC2_155 ---MTDMPEAG--AINLGLTGKVVLVTGGVRGVGAGISAVFAGQGATVVT MAB_0607|M.abscessus_ATCC_1997 ----------MRTPYDLGLEGRVVLVTGGVRGVGAGISQVFADQGATVVT MLBr_01807|M.leprae_Br4923 MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV :* .:: :. :* * . Mb3579c|M.bovis_AF2122/97 CARRAVDGQPYEFHRCDIRDEDSVKRLVGEIGERHGRLDMLVNNAGGSPY Rv3549c|M.tuberculosis_H37Rv CARRAVDGQPYEFHRCDIRDEDSVKRLVGEIGERHGRLDMLVNNAGGSPY MMAR_5037|M.marinum_M CARRAVENSPHEFHCCDIRDEDSVKRLMGSIAERHGRLDVLVNNAGGSPY MUL_4111|M.ulcerans_Agy99 CARRAVENSPHEFHCCDIRDEDSVKRLMGSIAERHGRLDVLVNNAGGSPY TH_2432|M.thermoresistible__bu CARRPVDGLPYEFHSCDVRDDDAVAAMIDTIVDRHGRLDVVVNNAGGSPY MAV_0611|M.avium_104 CARRAVEGLPYEFHSCDVRDDDAVKALIDTIADRHGRLDVVVNNAGGSPY Mflv_1491|M.gilvum_PYR-GCK CARRPVEDSPFEFRACDIRDDDAVKALVDGIASDHGRLDVVVNNAGGSPY Mvan_5265|M.vanbaalenii_PYR-1 CARRPVEGSPYEFRSCDIREDDSVKGLVEGIVSDHGRLDVVVNNAGGSPY MSMEG_6000|M.smegmatis_MC2_155 CARRPVEGLPYEFHSCDVRDDESVAALITAIVEKHGRIDVVVNNAGGSPY MAB_0607|M.abscessus_ATCC_1997 CARRPGD-APYEFHSCDVRDEESVDTLIGAIVAAHGRLDAVVNNAGGAPF MLBr_01807|M.leprae_Br4923 THRASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQGPVEVLVANAGITSD * . . **: ::::: . : :* :: :* *** :. Mb3579c|M.bovis_AF2122/97 ALAAEATHNFHRKIVELNVLAPLLVSQHANVLMQAQPNGGSIVNICSVSG Rv3549c|M.tuberculosis_H37Rv ALAAEATHNFHRKIVELNVLAPLLVSQHANVLMQAQPNGGSIVNICSVSG MMAR_5037|M.marinum_M ALAAEATPRFHSKIVELNLLAPLLVSQHAYGLMQEQPTGGSIVNVCSVSG MUL_4111|M.ulcerans_Agy99 ALAAEATPRFHSKIVELNLLAPLLVSQHAYGLMQEQPTGGSIVNVCSVSG TH_2432|M.thermoresistible__bu VLTAESSAKFNRKIIELNLLGPLSVSQHANAHMQKQPRGGSIINIASVSG MAV_0611|M.avium_104 VLTAESSAKFNRKIIELNLIGALSVSQHANAHMQKQAQGGSIVNICSLSG Mflv_1491|M.gilvum_PYR-GCK VLAAEASAKFSTKIVALNLLGALSVSTHANSVMQKQDTGGSIVNISSVSG Mvan_5265|M.vanbaalenii_PYR-1 VLAADASARFSAKIVALNLLGALSVSTHANAAMQAQAAGGSIVNITSVSG MSMEG_6000|M.smegmatis_MC2_155 VPASEASARFSSKIIELNLLGPLSVSQHANAVMQNQDTGGVIVNISSVSG MAB_0607|M.abscessus_ATCC_1997 ALAADASHNFHRKIIELNLLSALLVSQRANAVMQKQDGGGTIVNITSVSA MLBr_01807|M.leprae_Br4923 MLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQRFG-RYIFMGSVVG : . *:: :*: . : *: * * * * : : *: . Mb3579c|M.bovis_AF2122/97 RRPTPGTAAYGAAKAGLENLTTTLAVEWAPK-VRVNAVVVGMVETERSEL Rv3549c|M.tuberculosis_H37Rv RRPTPGTAAYGAAKAGLENLTTTLAVEWAPK-VRVNAVVVGMVETERSEL MMAR_5037|M.marinum_M RRPTPGTAAYGAAKAGFESLTSTLAVEWAPK-IRVNALVVGMVATEQSEL MUL_4111|M.ulcerans_Agy99 RRPTPGTAAYGAAKAGFESLTSTLAVEWAPK-IRVNALVVGMVATEQSEL TH_2432|M.thermoresistible__bu RRPTPGTAPYGAAKAGVESLTSTLAVEWAPK-VRVNSVVVGMVETEQADL MAV_0611|M.avium_104 RRPSPGTGAYGAAKAGLESLTQTLAVEWGPK-VRVNACVVGMVETEQSEL Mflv_1491|M.gilvum_PYR-GCK HRPTPGTAAYGAAKAGIDNLTSTLAVEWAPK-VRVNSVVVGMVETEQSEL Mvan_5265|M.vanbaalenii_PYR-1 RRPTPGTVAYGAAKAGMENMTATLAVEWAPK-VRVNSVVVGMVETEQSEL MSMEG_6000|M.smegmatis_MC2_155 RRPTPGTAAYGAAKAGVDNLTETLAVEWAPK-VRVNSVVVGMVETEQSEL MAB_0607|M.abscessus_ATCC_1997 GRPSPGTAAYGAAKAGLESLTRSLAVEWAPK-VRVNALAAGMIRTELSEM MLBr_01807|M.leprae_Br4923 LSGVPGQANYAASKSGLIGMARSLARELGSRSITANVVAPGFIDTEMTRA ** *.*:*:*. .:: :** * ..: : .* . *:: ** : Mb3579c|M.bovis_AF2122/97 FYGDAESIARVAATVPLGRLARPADIGWAAAFLASDAASYISGATLEVHG Rv3549c|M.tuberculosis_H37Rv FYGDAESIARVAATVPLGRLARPADIGWAAAFLASDAASYISGATLEVHG MMAR_5037|M.marinum_M FYGDAESIARVAATVPLGRLAQPADIGWAAAFLASDLASYISGATLEVHG MUL_4111|M.ulcerans_Agy99 FYGDAESIARVAATVPLGRLAQPADIGWAAAFLASDLASYISGATLEVHG TH_2432|M.thermoresistible__bu FYGDAESIAAISKNVPLGRLATPADVGWATAFLASDVASYISGASLEVHG MAV_0611|M.avium_104 FYGDADSIAAISKNVPLGRLAKPADIGWAAAFLASDAACYISGASLEVHG Mflv_1491|M.gilvum_PYR-GCK FYGDADSIAAISKNVPLGRLAQPEDIGWATAFLASDAASYISGASLEVHG Mvan_5265|M.vanbaalenii_PYR-1 FYGDADSIAAISKNVPLGRLAKPEDIGWATAFLASDAASYISGASLEVHG MSMEG_6000|M.smegmatis_MC2_155 FYGDADSIAAISKNVPLGRLAKPADIGWAAAFLASDAASYISGASLEVHG MAB_0607|M.abscessus_ATCC_1997 HYGDEDGIAAVGATVPLGRLANPDEIGWTAAFLASPLSSYVTGSVLTVHG MLBr_01807|M.leprae_Br4923 MDS--KYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGYISGAVIPVDG . . :****:. ::. :.:**** : *::*: : *.* Mb3579c|M.bovis_AF2122/97 GGEPPPYLGASSANK------- Rv3549c|M.tuberculosis_H37Rv GGEPPPYLGASSANK------- MMAR_5037|M.marinum_M GGEPPPYLAASSANK------- MUL_4111|M.ulcerans_Agy99 GGEPPPYLAASSANK------- TH_2432|M.thermoresistible__bu GGEPPHYLAATNADAIK----- MAV_0611|M.avium_104 GGEPPHYLATTNASAIK----- Mflv_1491|M.gilvum_PYR-GCK GGEPPHYLSTTTADIK------ Mvan_5265|M.vanbaalenii_PYR-1 GGEPPHYLATTTADIKTQG--- MSMEG_6000|M.smegmatis_MC2_155 GGEPPHYLATTTAELK------ MAB_0607|M.abscessus_ATCC_1997 GGERPAFLDAANVNSNENGEKE MLBr_01807|M.leprae_Br4923 GLGMGH---------------- *