For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2262 | - | - | 100% (181) | conserved hypothetical protein |
M. thermoresistible (build 8) | TH_1775 | - | 1e-61 | 62.29% (175) | conserved hypothetical protein |
M. thermoresistible (build 8) | TH_4125 | - | 3e-36 | 43.75% (176) | PUTATIVE conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3546 | - | 3e-66 | 65.19% (181) | hypothetical protein Mb3546 |
M. gilvum PYR-GCK | Mflv_4708 | - | 7e-60 | 62.22% (180) | hypothetical protein Mflv_4708 |
M. tuberculosis H37Rv | Rv3517 | - | 3e-66 | 65.19% (181) | hypothetical protein Rv3517 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1570 | - | 1e-39 | 47.73% (176) | hypothetical protein MAB_1570 |
M. marinum M | MMAR_5026 | - | 6e-45 | 49.43% (176) | hypothetical protein MMAR_5026 |
M. avium 104 | MAV_0642 | - | 4e-60 | 61.93% (176) | hypothetical protein MAV_0642 |
M. smegmatis MC2 155 | MSMEG_5917 | - | 2e-63 | 62.92% (178) | hypothetical protein MSMEG_5917 |
M. ulcerans Agy99 | MUL_4100 | - | 6e-38 | 54.48% (134) | hypothetical protein MUL_4100 |
M. vanbaalenii PYR-1 | Mvan_1730 | - | 5e-34 | 43.18% (176) | hypothetical protein Mvan_1730 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5026|M.marinum_M MAVPFLGSEAVASGEVRKSALRTRYHRLFPDVYIRCDAELSPQARARAGW MUL_4100|M.ulcerans_Agy99 MAVPFLGSEAVAGGEVRKSALRTRYHRLFPDVYIRCDAELSPQARARAGW MAB_1570|M.abscessus_ATCC_1997 MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASW Mb3546|M.bovis_AF2122/97 MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAW Rv3517|M.tuberculosis_H37Rv MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAW TH_2262|M.thermoresistible__bu -------------------------------------------------- Mflv_4708|M.gilvum_PYR-GCK MGEPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVATTLTAVAKAKAAS MSMEG_5917|M.smegmatis_MC2_155 MGDPVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKDTQPTAALRAKAAW MAV_0642|M.avium_104 MAEPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAW Mvan_1730|M.vanbaalenii_PYR-1 MGGVILGSEAIADGLVTSGRLRFGYSRLYPNVYVPRGQPQSLIDNTVGAW MMAR_5026|M.marinum_M LWSRRRGIVAGLAASALHGARWVDPDAPLDILHVNRNPRPGIRARGDRIA MUL_4100|M.ulcerans_Agy99 LWSRRRGIVTGLSASALHGARWVDPDAPLDILHVNRNPRPGIRARGDRIA MAB_1570|M.abscessus_ATCC_1997 LWTGRRGILAGHSASALHGARWIDAARNAEIVHDNRHRQPGITVWSGEIA Mb3546|M.bovis_AF2122/97 LWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVA Rv3517|M.tuberculosis_H37Rv LWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVA TH_2262|M.thermoresistible__bu ------------------------------------------------VT Mflv_4708|M.gilvum_PYR-GCK LWTGREGIIAGQSAAAIHGARWVDARRPAEVLWHNRRAPRGVLVWSDRVA MSMEG_5917|M.smegmatis_MC2_155 LWSDRRAVLAGRSASALHRSRWLDPRAPAELIHDNRRPPCGIKTWLDRFE MAV_0642|M.avium_104 LWSRRRGVVAGRSAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLV Mvan_1730|M.vanbaalenii_PYR-1 LWSGRRAIVTGRAAAALHGARWVSEKARVELNYNCRRPPKGIVCRDERIG . MMAR_5026|M.marinum_M TDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDSLMRAADVGRAQIE MUL_4100|M.ulcerans_Agy99 TDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDSLMRAADVGRAQIE MAB_1570|M.abscessus_ATCC_1997 PDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCRATELQISEAL Mb3546|M.bovis_AF2122/97 DDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADVE Rv3517|M.tuberculosis_H37Rv DDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADVE TH_2262|M.thermoresistible__bu DLEIDVVDGVPVTTPARTALDLACRYPQDRAVAAIDALANATRLKLADIE Mflv_4708|M.gilvum_PYR-GCK DDEVTTVRGVRVTTPERTALDIACRYPQRRAVAAIDALARAAHMKLADVE MSMEG_5917|M.smegmatis_MC2_155 DDEITVVDGIRVTTPARTAVDLACRYPLDTAVTLIDALGNATRLKMADVE MAV_0642|M.avium_104 GDEIQTIGGMPVTTPARTALDIACRSPVDKAVAAIDALARATELKVLEIE Mvan_1730|M.vanbaalenii_PYR-1 CDEVIQVGELAVAAAHRTAFDLGRHLPLNSAVVHLDALANATGLTRERVL *: : : .::. ***.*:. * **. :*:* .*: : MMAR_5026|M.marinum_M TLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLLLLDDGLPRPQTQI MUL_4100|M.ulcerans_Agy99 TLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLLLLDDGLPRPQTQI MAB_1570|M.abscessus_ATCC_1997 ELASRHAGMRGIRRARTAFELVDAGAQSPKETWLRLLLRDAGLPPVSTQI Mb3546|M.bovis_AF2122/97 MLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQI Rv3517|M.tuberculosis_H37Rv MLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQI TH_2262|M.thermoresistible__bu LIAERFRGRRGIRDARAVLDLVDPGAESPRETRLRLLVMRHGFPRPQTQI Mflv_4708|M.gilvum_PYR-GCK LLVDRHTGRRGIRAARAALNLVDPGAESPQETYLRLTVIGNHFPPPQTQI MSMEG_5917|M.smegmatis_MC2_155 LLVDRYRGRRGIKNARHVLDLVDGGAESPRETWLRLEVIRGGFPRPQTQI MAV_0642|M.avium_104 LLADRYRGRRGITRARNVLPLVDAGAESPRETWLRLLLLRAGFPRPRTQL Mvan_1730|M.vanbaalenii_PYR-1 PLLDEYRGARGMKKLRTALDLMDGGAQSPRETWLRLLLMKD-FPRPTTQI : .. * : * .. * **:**:** *** : :* **: MMAR_5026|M.marinum_M RVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQYSWDIRRKEILER MUL_4100|M.ulcerans_Agy99 RVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQ------------- MAB_1570|M.abscessus_ATCC_1997 LVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLKDIRRLEMLEG Mb3546|M.bovis_AF2122/97 PVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTE Rv3517|M.tuberculosis_H37Rv PVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTE TH_2262|M.thermoresistible__bu PIHDEYGRLVAVVDLGWEDLKIAMDYDGHHHRDP-DRFNRDIRRHDEITE Mflv_4708|M.gilvum_PYR-GCK PVWD-CGALVAELDMGWEHMMIGLDYEGDHHRTTREAFNKGIRRHDAVTE MSMEG_5917|M.smegmatis_MC2_155 PVHDEYGVLVGVFDMGWEDAMVGLDYEGDQHRTDRRRFNRDIHKSEDVRR MAV_0642|M.avium_104 PVRQ-YGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDIRRAEVLAE Mvan_1730|M.vanbaalenii_PYR-1 PLFNSRGAPFAYLDMGWEDLKIAVEYDGEHHQKNRDQYIWDEQRLRLIRA : : .. .*:** :.::*:*.:*: MMAR_5026|M.marinum_M LGWTVIRVLAGDRPTDILRRVRAALVRRASR------------------- MUL_4100|M.ulcerans_Agy99 -------------------------------------------------- MAB_1570|M.abscessus_ATCC_1997 MGWLIVRVVAEDHPHDIIRRVREALARRV--------------------- Mb3546|M.bovis_AF2122/97 LGWTDVRVTVEDTEGGIIWRVSAAWQRRT--------------------- Rv3517|M.tuberculosis_H37Rv LGWTDVRVTVEDTEGGIIWRVSAAWQRRT--------------------- TH_2262|M.thermoresistible__bu LGWTHLRVTSRDTDGGVIRQLQTVWARRT--------------------- Mflv_4708|M.gilvum_PYR-GCK LGWTDIRVTCNDTEGAIIARLTTAWRQRLCALGENPDAGPPWTHVRRQRP MSMEG_5917|M.smegmatis_MC2_155 LGWTHIRVTAQDGEADILKRIEAAGVPRGPRV------------------ MAV_0642|M.avium_104 LGWTVVRVTAEDTPAGIIARVPTAWTRRACTGSEKPARNSR--------- Mvan_1730|M.vanbaalenii_PYR-1 RDWLHIKVIKEDEPDDVTARVKRAWALRERAFAVAERVS----------- MMAR_5026|M.marinum_M -- MUL_4100|M.ulcerans_Agy99 -- MAB_1570|M.abscessus_ATCC_1997 -- Mb3546|M.bovis_AF2122/97 -- Rv3517|M.tuberculosis_H37Rv -- TH_2262|M.thermoresistible__bu -- Mflv_4708|M.gilvum_PYR-GCK GQ MSMEG_5917|M.smegmatis_MC2_155 -- MAV_0642|M.avium_104 -- Mvan_1730|M.vanbaalenii_PYR-1 --