For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1602 | - | - | 100% (398) | conserved hypothetical protein |
M. thermoresistible (build 8) | TH_2578 | - | 3e-44 | 29.73% (407) | PUTATIVE putative conserved hypothetical protein |
M. thermoresistible (build 8) | TH_2466 | - | 1e-29 | 27.05% (403) | PUTATIVE putative protein of unknown function DUF1023 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2820c | - | 9e-21 | 28.33% (406) | hypothetical protein Mb2820c |
M. gilvum PYR-GCK | Mflv_3088 | - | 1e-07 | 27.04% (233) | hypothetical protein Mflv_3088 |
M. tuberculosis H37Rv | Rv2797c | - | 9e-21 | 28.33% (406) | hypothetical protein Rv2797c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1913 | - | 1e-21 | 30.35% (402) | hypothetical protein MMAR_1913 |
M. avium 104 | MAV_5292 | - | 2e-13 | 25.93% (216) | hypothetical protein MAV_5292 |
M. smegmatis MC2 155 | MSMEG_6381 | - | 1e-150 | 69.47% (393) | hypothetical protein MSMEG_6381 |
M. ulcerans Agy99 | MUL_5057 | - | 8e-14 | 24.93% (373) | hypothetical protein MUL_5057 |
M. vanbaalenii PYR-1 | Mvan_0049 | - | 9e-17 | 26.85% (406) | hypothetical protein Mvan_0049 |
CLUSTAL 2.0.9 multiple sequence alignment TH_1602|M.thermoresistible__bu ----------------------------LLLSDIDSWNVGALQSIATELG MSMEG_6381|M.smegmatis_MC2_155 ----------------------------MQLSDIDSWNVGALQSIAFELR Mb2820c|M.bovis_AF2122/97 --------------------------MPLTVADIDRWNAQAVREVFHAAS Rv2797c|M.tuberculosis_H37Rv --------------------------MPLTVADIDRWNAQAVREVFHAAS MMAR_1913|M.marinum_M --------------------------MSLTVADIDRWDAQAVREVFHAAI MAV_5292|M.avium_104 -----MQLRHLSIPFLVAEAGGDPWSIDSGLQAGRPAQIASLARAFHDAG MUL_5057|M.ulcerans_Agy99 -----MQPRYISNPLLIAEAGGGPWAINQSLQLGRPAQISDLATAFHDAG Mvan_0049|M.vanbaalenii_PYR-1 --------------------------MAVSVSTVRDSKPDRLVDAADATG Mflv_3088|M.gilvum_PYR-GCK MGVGRLRGRRILPRRRRRSRRTVPPPVSPTVSAARRWRPDALLELAEQCD : : TH_1602|M.thermoresistible__bu ---GELTTIEGVASDLELISRLPGWESPAADAARGKIRSTANRVLDDAAV MSMEG_6381|M.smegmatis_MC2_155 ---DELRTIEGVATDLELISRLPGWDSPAADAARGRIGTAKANVLDDAAV Mb2820c|M.bovis_AF2122/97 ---ARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNE Rv2797c|M.tuberculosis_H37Rv ---ARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNE MMAR_1913|M.marinum_M ---ARAQVSLEVSRQLATLSIFANSGGKTAEAAAHQNAGLRRDLDAHGNE MAV_5292|M.avium_104 MSTAEADVAFAAARGRFEASWNHRNGALPINDSAE-VQRVTRALAVEGRQ MUL_5057|M.ulcerans_Agy99 RSTTEADTAFEQARRRFETSWNRENGAHPINDSPQ-VQGLTTSLRSQAAR Mvan_0049|M.vanbaalenii_PYR-1 RHRSELQTIIAGQRESLSHLQEHWSGQAASAALARGLDDIARQDRVAG-R Mflv_3088|M.gilvum_PYR-GCK DAARRLCDHIDDSVTAADASRDYWTG-AAADAARGAARGIAADAARAAHR . . . TH_1602|M.thermoresistible__bu IGAVRQLAEETAAAVATLQTELEGVRADIAAQGGLLRLSDN--------- MSMEG_6381|M.smegmatis_MC2_155 IGAVAQLADETAAAVAKLQSQLEAVRADVAAQGGLLHLADN--------- Mb2820c|M.bovis_AF2122/97 ALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALIN--------- Rv2797c|M.tuberculosis_H37Rv ALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALIN--------- MMAR_1913|M.marinum_M ALAVARAADRAADGIVKVQSELAALRKAAAAAELQIDALSS--------- MAV_5292|M.avium_104 LPRIATDLETIAAVLAESQRTSTWYIEALEYDLAAIDDEIG--------- MUL_5057|M.ulcerans_Agy99 LPEIGLQLDNIAGGLAGAQRSATGQIVGLETQLCDIDSEIGEVL---ALE Mvan_0049|M.vanbaalenii_PYR-1 LLNLESALRNGGLQMGALRDALLDLVSSLERFGFAVADDGT--------- Mflv_3088|M.gilvum_PYR-GCK LVNASAAARDGATQIGAARDDAVGQVDDALEHGFLVADDGTVTVGADPDP . : : : TH_1602|M.thermoresistible__bu --GDVCIDAPADLHDELQPIADNIESRAKALIHQAKDIDADCVEVFANLA MSMEG_6381|M.smegmatis_MC2_155 --GDVTIGGSPDDREQLKHIAENIEARAKALIHQAEDIDADCAEVFGHIE Mb2820c|M.bovis_AF2122/97 --RVVPIPG-----------LRSTEAQWARTLAKQTELQAELDAIMAEAN Rv2797c|M.tuberculosis_H37Rv --RVVPIPG-----------LRSTEAQWARTLAKQTELQAELDAIMAEAN MMAR_1913|M.marinum_M --RVVPIAG-----------LRHTESEWARVLAKQAELQADLGAIVVEAN MAV_5292|M.avium_104 --QALEEADHCAAEELRYS----AVTETKAITLVLEQIRESYSRLLHSAL MUL_5057|M.ulcerans_Agy99 HGAQLTTADRLALEAIVCALEDQAVGDTQSAVSQLHSIRAGYAGLLHQAP Mvan_0049|M.vanbaalenii_PYR-1 -----VTPEQWLVGQFLDSLADKFTGFLQKMLQLFTDLDENTAAAIDQAA Mflv_3088|M.gilvum_PYR-GCK LLVALAGGRDTLAADLLQLRADELSVRIPAALDRLGAADSDAAADLVRAL . TH_1602|M.thermoresistible__bu DGKITAQGAADAVSAQEMGRAQSGLSAPYPPEGEGVAPRDVTAWWDALSE MSMEG_6381|M.smegmatis_MC2_155 NGDVTARGSSDFASAQEMGREQSGLSAPYPPEGEGVSPENVNAWWNALSE Mb2820c|M.bovis_AF2122/97 AVDEELASAVNMADGDAPIPADSGP--PVGPEGLTPTQLASDANEERLRE Rv2797c|M.tuberculosis_H37Rv AVDEELASAVNMADGDAPIPADSGP--PVGPEGLTPTQLASDANEERLRE MMAR_1913|M.marinum_M TIDEELASAVNMADGDSPIPAEAGA--PVGPEGLTPTQRASDANEELLRE MAV_5292|M.avium_104 ARLQADGVDPANVRGVDE----------LSIPPADTGPEQVKWWWDSLSA MUL_5057|M.ulcerans_Agy99 TSLSADGFDPAVIQALDAPQSPAEPAEVIAIAAPTASAEEVKKWWDSLSP Mvan_0049|M.vanbaalenii_PYR-1 GVDSPN--PPVEVG-GQD----------IHIPSPDTDPADVKQWWDSLSE Mflv_3088|M.gilvum_PYR-GCK TDTDRPVTPAPTVPAGAWPVPSGD----VVDGWPAMSQDRIAAQVAAMTD : TH_1602|M.thermoresistible__bu EEQHKVIAEHPDWIGDRDGVPAWARREVNLAELDQEIAEAQGEVDALPTR MSMEG_6381|M.smegmatis_MC2_155 EEQAKVISEHPDWIGNRDGVPVAVRSEVNKAALDRELAEAQAAVDAMPSR Mb2820c|M.bovis_AF2122/97 E-RARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAALTDELS- Rv2797c|M.tuberculosis_H37Rv E-RARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAALTDELS- MMAR_1913|M.marinum_M E-RAKLRARIGQLQGRYDQLAARAACDYNNGILDSDAMGQLAALGDQLT- MAV_5292|M.avium_104 AQQRLLIDQHPQELGNLNGIPAEARDSVNRATMTDDLSKVEAVARVRGVS MUL_5057|M.ulcerans_Agy99 QQRGRLIDEHPPELGNLNGINAITRDLVNQAVMDDDITRVESVAMQRGVS Mvan_0049|M.vanbaalenii_PYR-1 QQRRELIDRHPPMLGNLNGIPAEVRDQVNVAVMDDDLDRVQNVADRNGVS Mflv_3088|M.gilvum_PYR-GCK DQRARLIAEFPHQVGNTDGVPWDMRVAANRTNIATAILAESAADAPSRR- : : . . : : : : TH_1602|M.thermoresistible__bu EEFLGPYG-TGGPGGYLREGRYDRMVRGPQERLEKALAMREAMSIDGD-- MSMEG_6381|M.smegmatis_MC2_155 DEFRREH--PGWNGAQLN-AAYNKMMFERQGRLDDAKAMKDALSVDG--- Mb2820c|M.bovis_AF2122/97 ---------------------------AARGRLGELDAVDEALSRAP--- Rv2797c|M.tuberculosis_H37Rv ---------------------------AARGRLGELDAVDEALSRAP--- MMAR_1913|M.marinum_M ---------------------------AAKGRLGDLDAVDQALRNAP--- MAV_5292|M.avium_104 VQALRDNALHNRDIDMFRNPAAYGLCATDIVRYQNAVKTNDCLN------ MUL_5057|M.ulcerans_Agy99 ADDIVN------------NPQKYGLSASDVTRYRNAIRTRDGLIYDR--- Mvan_0049|M.vanbaalenii_PYR-1 TDEVAG------------NPGRYGLTDGDVTRYQNAKRTQEGLLHQLGAQ Mflv_3088|M.gilvum_PYR-GCK ----------------------------RIAFYRSLLGEVDDPSGDTR-- . : TH_1602|M.thermoresistible__bu -------------PSKGYDPNKYLMLLEFPEG--REPRAAIAVGNPDEAE MSMEG_6381|M.smegmatis_MC2_155 ----------------KYDPNKYLMLLEFPED--REPRAAIAVGNPDTAE Mb2820c|M.bovis_AF2122/97 --------------------ETYLTQLQIPEDPNQQVLAAVAVGNPDTAA Rv2797c|M.tuberculosis_H37Rv --------------------ETYLTQLQIPEDPNQQVLAAVAVGNPDTAA MMAR_1913|M.marinum_M --------------------ETYLAQLRVPDDPHQQVLAAVAVGNPDTAA MAV_5292|M.avium_104 --------------KACDPGLPLMLWAYDPLAFAGKGRAGIAIGNPDKSR MUL_5057|M.ulcerans_Agy99 -------------EHATDDPRPVMLWAYDPLAFNGEGKAAIAIGNPDYAR Mvan_0049|M.vanbaalenii_PYR-1 DGETRRYSEIGEQERRDKNWRPTMLWAYDPQAFDGKGRAAVSIGNPDRAS Mflv_3088|M.gilvum_PYR-GCK --------------------IARQILAFDPGR----ASLVELHGDLGTAR * *: . : TH_1602|M.thermoresistible__bu HVAVTTPGVGTTPT-SLPGMVSEAAVLQAESQRQLDFAGREGEQVSTIAW MSMEG_6381|M.smegmatis_MC2_155 HVTVTTPGVGTRPE-SLGGMVSEADALRQEAQTQLDRAGRSGEQVATIAW Mb2820c|M.bovis_AF2122/97 NVSVTVPGVGSTTRGALPGMVTEARDLRSEVIRQLNAAGKP-ASVATIAW Rv2797c|M.tuberculosis_H37Rv NVSVTVPGVGSTTRGALPGMVTEARDLRSEVIRQLNAAGKP-ASVATIAW MMAR_1913|M.marinum_M NVSVTVPGVGSTTRGTLPGMVTEARNLQSEEMRQLKNAGKP-TSVAAIAW MAV_5292|M.avium_104 NTAVVVPGTNSSVR---GGWMSDGADDAINLYTQAQRADP-HHATAVLAW MUL_5057|M.ulcerans_Agy99 NTAVIVPGAGSSVA---QGWMSD-HDDATNLYDQALAADPEHHYTAVIAW Mvan_0049|M.vanbaalenii_PYR-1 NTAVIVPGTSASVR---DGWLSDGHNDAIHLYGQSLKADP-ADPTAVISW Mflv_3088|M.gilvum_PYR-GCK SVAVLVPGVNTTVEG-----------SAANAATARRFVSGSDGRLAMITY .:* .**..: . .. : ::: TH_1602|M.thermoresistible__bu LGYEPPR--------E---------------------------------- MSMEG_6381|M.smegmatis_MC2_155 LGYEPPG--------TDISVAEAG---FERRANEAAPDLADFYRGINATN Mb2820c|M.bovis_AF2122/97 MGYHPPP--------NPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVR Rv2797c|M.tuberculosis_H37Rv MGYHPPP--------NPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVR MMAR_1913|M.marinum_M MGYEPPP--------NPLDTATAGDLWQTMTDGQARAGAGDLSRYLQQVR MAV_5292|M.avium_104 MGYDAPEFDDSHWEQAVTDPAKLEQVGTPWRARQAGVLLAGDVNGLAATH MUL_5057|M.ulcerans_Agy99 MGYDAPN---GFSDVRVTEPG---------LARSGGALLANDVNGLWVTH Mvan_0049|M.vanbaalenii_PYR-1 MGYNTPE---SFTDPNIANTG---------LARAGGDALAWDVNGLNVTH Mflv_3088|M.gilvum_PYR-GCK LGGPFPQ---------VHDPVTAVAAADRRYALEMAPRLVAFS--EDVAR :* * TH_1602|M.thermoresistible__bu -------------------------------------------------- MSMEG_6381|M.smegmatis_MC2_155 EHGSDVHLSAFGHSYGSLTTAQALYELGET--GVVDDAAFYGSPGLGHTD Mb2820c|M.bovis_AF2122/97 ANNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYS Rv2797c|M.tuberculosis_H37Rv ANNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYS MMAR_1913|M.marinum_M ANNPSGHLTVLGHSYGSLTASLALQDLNAHGAHPVNDVVFYGSPGLELYS MAV_5292|M.avium_104 DAGSRAHVTVIGHSYGSTTVADAFANSGMR----ANDAVLTGCPGTDLAH MUL_5057|M.ulcerans_Agy99 NSLTPQHVTVIGHSYGSTTVADAFAGSGMQ----ANDAILIGCPGTDLAR Mvan_0049|M.vanbaalenii_PYR-1 EAGVPEHVTVIGHSYGSTTVADAFANSGMQ----ADDAILLGSPGTDVAR Mflv_3088|M.gilvum_PYR-GCK RVPDSVLVTVVGHSYGGSIVGTAETLGLTS-----DRTVFLAAAGAGVGV TH_1602|M.thermoresistible__bu -------------------------------------------------- MSMEG_6381|M.smegmatis_MC2_155 STETYISPRGVPIEVMAPIRDESDMFLADGRAFVMSAPGDPISGDPTWNG Mb2820c|M.bovis_AF2122/97 ---------------------PAQLGLDHGHAYVMQAPHDLITN------ Rv2797c|M.tuberculosis_H37Rv ---------------------PAQLGLDHGHAYVMQAPHDLITN------ MMAR_1913|M.marinum_M ---------------------PAQLGLEHGHAYVMQAPHDLITG------ MAV_5292|M.avium_104 S--------------------AADFHLDGGRLYVGAASTDAISWIGESGS MUL_5057|M.ulcerans_Agy99 S--------------------AADFHFDGGQVYVGSASTDPVSWIGES-S Mvan_0049|M.vanbaalenii_PYR-1 S--------------------AADFNLDGGQVYIGDASTDPVGWLGQMGN Mflv_3088|M.gilvum_PYR-GCK D-------------------DPGDWHNRNPHVQRYSMT------------ TH_1602|M.thermoresistible__bu -------------------------------------------------- MSMEG_6381|M.smegmatis_MC2_155 VPLPS---AGDLGQFGPNPLTLPLEQLSADAAVTPDGVSREGAVAHADYP Mb2820c|M.bovis_AF2122/97 LVAPL---APLHGWGLDPYLTPGFTELSSQAGFDPGGIWRDGVYAHGDYP Rv2797c|M.tuberculosis_H37Rv LVAPL---APLHGWGLDPYLTPGFTELSSQAGFDPGGIWRDGVYAHGDYP MMAR_1913|M.marinum_M VVAPL---APLHGWGPDPYLTPGLTELSSQAGFDPGGIWRDGVYAHGDYP MAV_5292|M.avium_104 GLP----NGLNETLGGPLGPFAGLGTDPAHAGFGAARFRAEVAGSHSVMP MUL_5057|M.ulcerans_Agy99 GVPGELLKGKLREYGVPIPLDAGLGRDPAGDGFGSVRFHAEVPGSGTMD- Mvan_0049|M.vanbaalenii_PYR-1 TLP----GELNDSLGNMVGPTAGLGADPAFEDFGATRFRAEVPGADMIDP Mflv_3088|M.gilvum_PYR-GCK --------APGDFIELVQGIPGGPHGADPDEMDGVIGLPTGFYDDGGLVA TH_1602|M.thermoresistible__bu -------------------------------------------------- MSMEG_6381|M.smegmatis_MC2_155 RPVELPSGEKVLRTPAYNLAVIAAGLADVPGPNGEDRLVR---------- Mb2820c|M.bovis_AF2122/97 RSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPPLLPPILGGGMPAAPGP Rv2797c|M.tuberculosis_H37Rv RSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPPLLPPILGGGMPAAPGP MMAR_1913|M.marinum_M RVFQDAAGQPQLRMSGYNLAAIAAGLPDNKVGAPLLPPVLGGGMPAAPGH MAV_5292|M.avium_104 WFTDHSDYYDVGSEALHNMTEIVTGRGNELAAEGMLAPDRNAARVSILGR MUL_5057|M.ulcerans_Agy99 -RHDHSHYYVMGSESLRSITDISSGHPDRLASDDLIAE----------GR Mvan_0049|M.vanbaalenii_PYR-1 --SDHSYYYTVGSESLRSMTEIVTGNGGRLDELGLLAQPRTELTVSTPQQ Mflv_3088|M.gilvum_PYR-GCK GWEAHSGMLNRPSGAWRTILDVLTGDPGTLSSASSIPAGG---------- TH_1602|M.thermoresistible__bu ---------------------------------------------- MSMEG_6381|M.smegmatis_MC2_155 ---------------------------------------------- Mb2820c|M.bovis_AF2122/97 ALRGGR---------------------------------------- Rv2797c|M.tuberculosis_H37Rv ALRGGR---------------------------------------- MMAR_1913|M.marinum_M VLAGGH---------------------------------------- MAV_5292|M.avium_104 VHT-PLGTLSLPRVEIRMPVVVDPEWERPARSVTNEHGF------- MUL_5057|M.ulcerans_Agy99 RQP-HVGPLRVP----GVPAYIDPESDRPRDTVHDDHHYPAYQPPR Mvan_0049|M.vanbaalenii_PYR-1 LDVPVLGEVPLPHLEVETPVIYDPEWNRAGGSVTNDHGY------- Mflv_3088|M.gilvum_PYR-GCK ----------------------------------------------