For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2466 | - | - | 100% (522) | putative protein of unknown function DUF1023 |
| M. thermoresistible (build 8) | TH_2235 | - | 7e-61 | 34.23% (523) | CONSERVED HYPOTHETICAL PROTEIN |
| M. thermoresistible (build 8) | TH_2578 | - | 6e-53 | 30.65% (558) | PUTATIVE putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2820c | - | 3e-33 | 31.59% (421) | hypothetical protein Mb2820c |
| M. gilvum PYR-GCK | Mflv_3088 | - | 3e-25 | 25.58% (516) | hypothetical protein Mflv_3088 |
| M. tuberculosis H37Rv | Rv2797c | - | 3e-33 | 31.59% (421) | hypothetical protein Rv2797c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0252 | - | 5e-14 | 23.74% (396) | hypothetical protein MAB_0252 |
| M. marinum M | MMAR_1913 | - | 1e-30 | 28.36% (550) | hypothetical protein MMAR_1913 |
| M. avium 104 | MAV_5292 | - | 1e-24 | 23.62% (470) | hypothetical protein MAV_5292 |
| M. smegmatis MC2 155 | MSMEG_6381 | - | 6e-48 | 30.12% (581) | hypothetical protein MSMEG_6381 |
| M. ulcerans Agy99 | MUL_5057 | - | 1e-22 | 27.45% (357) | hypothetical protein MUL_5057 |
| M. vanbaalenii PYR-1 | Mvan_0049 | - | 1e-49 | 27.44% (594) | hypothetical protein Mvan_0049 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2820c|M.bovis_AF2122/97 --------------------------MPLTVADIDRWNAQAVREVFHAA-
Rv2797c|M.tuberculosis_H37Rv --------------------------MPLTVADIDRWNAQAVREVFHAA-
MMAR_1913|M.marinum_M --------------------------MSLTVADIDRWDAQAVREVFHAA-
MAV_5292|M.avium_104 -----MQLRHLSIPFLVAEAGGDPWSIDSGLQAGRPAQIASLARAFHDAG
MUL_5057|M.ulcerans_Agy99 -----MQPRYISNPLLIAEAGGGPWAINQSLQLGRPAQISDLATAFHDAG
Mvan_0049|M.vanbaalenii_PYR-1 --------------------------MAVSVSTVRDSKPDRLVDAADATG
MSMEG_6381|M.smegmatis_MC2_155 ----------------------------MQLSDIDSWNVGALQSIAFELR
TH_2466|M.thermoresistible__bu -----------------------VWVMSATISLVEAADPQGLTAAAAQLQ
Mflv_3088|M.gilvum_PYR-GCK MGVGRLRGRRILPRRRRRSRRTVPPPVSPTVSAARRWRPDALLELAEQCD
MAB_0252|M.abscessus_ATCC_1997 --------------------------MRPTISQLRGWNLDALGKAADAAR
: :
Mb2820c|M.bovis_AF2122/97 --SARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNE
Rv2797c|M.tuberculosis_H37Rv --SARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNE
MMAR_1913|M.marinum_M --IARAQVSLEVSRQLATLSIFANSGGKTAEAAAHQNAGLRRDLDAHGNE
MAV_5292|M.avium_104 MSTAEADVAFAAARGRFEASWNHRNGALPINDSAE-VQRVTRALAVEGRQ
MUL_5057|M.ulcerans_Agy99 RSTTEADTAFEQARRRFETSWNRENGAHPINDSPQ-VQGLTTSLRSQAAR
Mvan_0049|M.vanbaalenii_PYR-1 RHRSELQTIIAGQRESLSHLQEHWSGQAASAALARGLDDIARQDRVAG-R
MSMEG_6381|M.smegmatis_MC2_155 ---DELRTIEGVATDLELISRLPGWDSPAADAARGRIGTAKANVLDDAAV
TH_2466|M.thermoresistible__bu TKXTHLDTIITAERSALAALAGGWEGTAADAALARGEQHLAQQ-EQLRTR
Mflv_3088|M.gilvum_PYR-GCK DAARRLCDHIDDSVTAADASRDYWTG-AAADAARGAARGIAADAARAAHR
MAB_0252|M.abscessus_ATCC_1997 DNARTLDASLDSCDRVFNDASG-WYGKTHDAAKIKVDQELDHG-REIRNV
.
Mb2820c|M.bovis_AF2122/97 ALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALIN---------
Rv2797c|M.tuberculosis_H37Rv ALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALIN---------
MMAR_1913|M.marinum_M ALAVARAADRAADGIVKVQSELAALRKAAAAAELQIDALSS---------
MAV_5292|M.avium_104 LPRIATDLETIAAVLAESQRTSTWYIEALEYDLAAIDDEIG--------Q
MUL_5057|M.ulcerans_Agy99 LPEIGLQLDNIAGGLAGAQRSATGQIVGLETQLCDIDSEIGEVLALEHGA
Mvan_0049|M.vanbaalenii_PYR-1 LLNLESALRNGGLQMGALRDALLDLVSSLERFGFAVADDGT---------
MSMEG_6381|M.smegmatis_MC2_155 IGAVAQLADETAAAVAKLQSQLEAVRADVAAQGGLLHLADN---------
TH_2466|M.thermoresistible__bu LTSLQATLADAGANLSALRTRILDVAAQARSLGGLVRDDGT---------
Mflv_3088|M.gilvum_PYR-GCK LVNASAAARDGATQIGAARDDAVGQVDDALEHGFLVADDGTVTVGADPDP
MAB_0252|M.abscessus_ATCC_1997 LNRISDDAEDAARTLKHAKEFTLQDVDGAVSEGFTVTDTGE---------
. : : :
Mb2820c|M.bovis_AF2122/97 RVVPIPGLRSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVNMA
Rv2797c|M.tuberculosis_H37Rv RVVPIPGLRSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVNMA
MMAR_1913|M.marinum_M RVVPIAGLRHTESEWARVLAKQAELQADLGAIVVEANTIDEELASAVNMA
MAV_5292|M.avium_104 ALEEADHCAAEELRYS----AVTETKAITLVLEQIRESYSRLLHSALARL
MUL_5057|M.ulcerans_Agy99 QLTTADRLALEAIVCALEDQAVGDTQSAVSQLHSIRAGYAGLLHQAPTSL
Mvan_0049|M.vanbaalenii_PYR-1 --VTPEQWLVGQFLDSLADKFTGFLQKMLQLFTDLDENTAAAIDQAAGVD
MSMEG_6381|M.smegmatis_MC2_155 GDVTIGGSPDDREQLKHIAENIEARAKALIHQAEDIDADCAEVFGHIENG
TH_2466|M.thermoresistible__bu ---VIALTSGGLMTPDVAAAYTTTLKTLLQTFDRVDQQSSQSVIQALGDG
Mflv_3088|M.gilvum_PYR-GCK LLVALAGGRDTLAADLLQLRADELSVRIPAALDRLGAADSDAAADLVRAL
MAB_0252|M.abscessus_ATCC_1997 --VSHPDAKKAQAAADHQRRIQSGLDELARLDDMYGKKLREAADDLESMR
Mb2820c|M.bovis_AF2122/97 DGDAPIPADSGPPVG-------------PEGLTP-------TQLASDANE
Rv2797c|M.tuberculosis_H37Rv DGDAPIPADSGPPVG-------------PEGLTP-------TQLASDANE
MMAR_1913|M.marinum_M DGDSPIPAEAGAPVG-------------PEGLTP-------TQRASDANE
MAV_5292|M.avium_104 QADGVDPANVRGVDE----------LSIPPADTG-------PEQVKWWWD
MUL_5057|M.ulcerans_Agy99 SADGFDPAVIQALDAPQSPAEPAEVIAIAAPTAS-------AEEVKKWWD
Mvan_0049|M.vanbaalenii_PYR-1 SPN--PPVEVG-GQD----------IHIPSPDTD-------PADVKQWWD
MSMEG_6381|M.smegmatis_MC2_155 DVTARGSSDFASAQEMGREQSGLSAPYPPEGEGVS------PENVNAWWN
TH_2466|M.thermoresistible__bu ADTGAEAPPEPDIDD------------LKPPEGAT------DTEVNQWWD
Mflv_3088|M.gilvum_PYR-GCK TDTDRPVTPAPTVPAG--------AWPVPSGDVVDGWPAMSQDRIAAQVA
MAB_0252|M.abscessus_ATCC_1997 DGQHDVTLPSGERVDP-------DALVDRVSKMS-------ADERAAFLA
Mb2820c|M.bovis_AF2122/97 ERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAALTD
Rv2797c|M.tuberculosis_H37Rv ERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAALTD
MMAR_1913|M.marinum_M ELLREERAKLRARIGQLQGRYDQLAARAACDYNNGILDSDAMGQLAALGD
MAV_5292|M.avium_104 SLSAAQQRLLIDQHPQELGNLNGIPAEARDSVNRATMTDDLSKVEAVARV
MUL_5057|M.ulcerans_Agy99 SLSPQQRGRLIDEHPPELGNLNGINAITRDLVNQAVMDDDITRVESVAMQ
Mvan_0049|M.vanbaalenii_PYR-1 SLSEQQRRELIDRHPPMLGNLNGIPAEVRDQVNVAVMDDDLDRVQNVADR
MSMEG_6381|M.smegmatis_MC2_155 ALSEEEQAKVISEHPDWIGNRDGVPVAVRSEVNKAALDRELAEAQAAVDA
TH_2466|M.thermoresistible__bu GLSEEDRQRLIHERPEWIGNLDGVPASARDQANRNRLEGLRDDPGLTVEE
Mflv_3088|M.gilvum_PYR-GCK AMTDDQRARLIAEFPHQVGNTDGVPWDMRVAANRTNIATAILAESAADAP
MAB_0252|M.abscessus_ATCC_1997 TLSPETVDAMVIANPEVMGNSDGIPFDTRIAANEINIRNALSDELQKQPP
: .. : : : :
Mb2820c|M.bovis_AF2122/97 ELSAARGRLG----------------------ELDAVDEALSR-------
Rv2797c|M.tuberculosis_H37Rv ELSAARGRLG----------------------ELDAVDEALSR-------
MMAR_1913|M.marinum_M QLTAAKGRLG----------------------DLDAVDQALRN-------
MAV_5292|M.avium_104 RGVSVQALRDNALHNRDIDMFRNPAAYGLCATDIVRYQNAVKTNDCLN--
MUL_5057|M.ulcerans_Agy99 RGVSADDIVN------------NPQKYGLSASDVTRYRNAIRTRDGLIYD
Mvan_0049|M.vanbaalenii_PYR-1 NGVSTDEVAG------------NPGRYGLTDGDVTRYQNAKRTQEGLLHQ
MSMEG_6381|M.smegmatis_MC2_155 MPSRDEFRREHPGWNG---AQLNAAYNKMMFERQGRLDDAKAMKDALSVD
TH_2466|M.thermoresistible__bu RD------------------------------TIAAIDDALEG-------
Mflv_3088|M.gilvum_PYR-GCK SRRRIAFYRS----------------------LLGEVDDPSGD-------
MAB_0252|M.abscessus_ATCC_1997 DQARVNQLQD----------------------MLKPMEDPLVTRPADAG-
:.
Mb2820c|M.bovis_AF2122/97 ----------------------APETYLTQLQIPEDPNQQVLAAVAVGNP
Rv2797c|M.tuberculosis_H37Rv ----------------------APETYLTQLQIPEDPNQQVLAAVAVGNP
MMAR_1913|M.marinum_M ----------------------APETYLAQLRVPDDPHQQVLAAVAVGNP
MAV_5292|M.avium_104 ------------------KACDPGLPLMLWAYDPLAFAGKGRAGIAIGNP
MUL_5057|M.ulcerans_Agy99 R----------------EHATDDPRPVMLWAYDPLAFNGEGKAAIAIGNP
Mvan_0049|M.vanbaalenii_PYR-1 LGAQDGETRRYSEIGEQERRDKNWRPTMLWAYDPQAFDGKGRAAVSIGNP
MSMEG_6381|M.smegmatis_MC2_155 G-------------------KYDPNKYLMLLEFPED--REPRAAIAVGNP
TH_2466|M.thermoresistible__bu ----------------------EERQLLVLDFDGEHP----KVAVALGDV
Mflv_3088|M.gilvum_PYR-GCK ----------------------TRIARQILAFDPGR----ASLVELHGDL
MAB_0252|M.abscessus_ATCC_1997 ----------------------PRDFMVDRKYVMFSTEGNGRMIEMIGDI
*:
Mb2820c|M.bovis_AF2122/97 DT-AANVSVTVPGVGSTTR------GALPGMVTEARDLRSEVIRQLNAAG
Rv2797c|M.tuberculosis_H37Rv DT-AANVSVTVPGVGSTTR------GALPGMVTEARDLRSEVIRQLNAAG
MMAR_1913|M.marinum_M DT-AANVSVTVPGVGSTTR------GTLPGMVTEARNLQSEEMRQLKNAG
MAV_5292|M.avium_104 DK-SRNTAVVVPGTNSSVRG-----GWMSDGADDAINLYT---QAQRADP
MUL_5057|M.ulcerans_Agy99 DY-ARNTAVIVPGAGSSVAQ-----GWMSD-HDDATNLYD---QALAADP
Mvan_0049|M.vanbaalenii_PYR-1 DR-ASNTAVIVPGTSASVRD-----GWLSDGHNDAIHLYG---QSLKADP
MSMEG_6381|M.smegmatis_MC2_155 DT-AEHVTVTTPGVG--TRP-----ESLGGMVSEADALRQEAQTQLDRAG
TH_2466|M.thermoresistible__bu ET-ADHVSVYVPGTGSVTYDKPDAGNDLPTYVEQSGWLKAETERVLEQAG
Mflv_3088|M.gilvum_PYR-GCK GT-ARSVAVLVPGVNTTVEG-------SAANAATARRFVS------GSDG
MAB_0252|M.abscessus_ATCC_1997 KPGVRGVGVIVPGTNTNLNG-------SGSNHESAVKLAK-------ESG
. * .**.. : :
Mb2820c|M.bovis_AF2122/97 K-PASVATIAWMGYHPPP-----NPLDTGSAGDLWQTMTDGQAHAGAADL
Rv2797c|M.tuberculosis_H37Rv K-PASVATIAWMGYHPPP-----NPLDTGSAGDLWQTMTDGQAHAGAADL
MMAR_1913|M.marinum_M K-PTSVAAIAWMGYEPPP-----NPLDTATAGDLWQTMTDGQARAGAGDL
MAV_5292|M.avium_104 --HHATAVLAWMGYDAPEFDDSHWEQAVTDPAKLEQVGTPWRARQAGVLL
MUL_5057|M.ulcerans_Agy99 E-HHYTAVIAWMGYDAPN---GFSDVRVTEPG---------LARSGGALL
Mvan_0049|M.vanbaalenii_PYR-1 --ADPTAVISWMGYNTPE---SFTDPNIANTG---------LARAGGDAL
MSMEG_6381|M.smegmatis_MC2_155 RSGEQVATIAWLGYEPPG-----TDISVAEAG------FERRANEAAPDL
TH_2466|M.thermoresistible__bu RSDETVATVAWLGYEPPA--------NVAQAG------SPHYADDNAPKL
Mflv_3088|M.gilvum_PYR-GCK R----LAMITYLGGPFPQVHDPVTAVAAADRR---------YALEMAPRL
MAB_0252|M.abscessus_ATCC_1997 S-----PIFLYLGGDFPQG-----LDKAADPS---------YAAAMAPKL
. . ::* * * . *
Mb2820c|M.bovis_AF2122/97 SRYLQQVRANN-PSG---HLTVLGHSYGSLTASLALQDLDAQSAHPVNDV
Rv2797c|M.tuberculosis_H37Rv SRYLQQVRANN-PSG---HLTVLGHSYGSLTASLALQDLDAQSAHPVNDV
MMAR_1913|M.marinum_M SRYLQQVRANN-PSG---HLTVLGHSYGSLTASLALQDLNAHGAHPVNDV
MAV_5292|M.avium_104 AGDVNGLAATH-DAGSRAHVTVIGHSYG----STTVADAFANSGMRANDA
MUL_5057|M.ulcerans_Agy99 ANDVNGLWVTH-NSLTPQHVTVIGHSYG----STTVADAFAGSGMQANDA
Mvan_0049|M.vanbaalenii_PYR-1 AWDVNGLNVTH-EAGVPEHVTVIGHSYG----STTVADAFANSGMQADDA
MSMEG_6381|M.smegmatis_MC2_155 ADFYRGINATN-EHGSDVHLSAFGHSYGSLTTAQALYELGETG--VVDDA
TH_2466|M.thermoresistible__bu ASFINGLNSSR-DTDP--NLTVLGHSYG-----SLVASEALQRGTAADNV
Mflv_3088|M.gilvum_PYR-GCK VAFSEDVARRV-PDS--VLVTVVGHSYG-----GSIVGTAETLGLTSDRT
MAB_0252|M.abscessus_ATCC_1997 VDFGHEVDRAVGQNAPGTPVTYVGHSYG-----GAIVGTAEQMGLRADRI
. : :: .***** : :
Mb2820c|M.bovis_AF2122/97 VFYGSPGLELY---------------------SPAQLGLDHGHAYVMQAP
Rv2797c|M.tuberculosis_H37Rv VFYGSPGLELY---------------------SPAQLGLDHGHAYVMQAP
MMAR_1913|M.marinum_M VFYGSPGLELY---------------------SPAQLGLEHGHAYVMQAP
MAV_5292|M.avium_104 VLTGCPGTDLAH--------------------SAADFHLDGGRLYVGAAS
MUL_5057|M.ulcerans_Agy99 ILIGCPGTDLAR--------------------SAADFHFDGGQVYVGSAS
Mvan_0049|M.vanbaalenii_PYR-1 ILLGSPGTDVAR--------------------SAADFNLDGGQVYIGDAS
MSMEG_6381|M.smegmatis_MC2_155 AFYGSPGLGHTDSTETYISPRGVPIEVMAPIRDESDMFLADGRAFVMSAP
TH_2466|M.thermoresistible__bu VFMGSPGLETNVWEWHKN-------------VTPEKLHLSEGHVFVQHAD
Mflv_3088|M.gilvum_PYR-GCK VFLAAAGAGVGVD-------------------DPGDWHNRNPHVQRYSMT
MAB_0252|M.abscessus_ATCC_1997 LHASSAGTGILP--------------------GGYTDPNPNVQRYSMTAP
...* :
Mb2820c|M.bovis_AF2122/97 HD-------------------LITNLVAPLAPLHGW---------GLDPY
Rv2797c|M.tuberculosis_H37Rv HD-------------------LITNLVAPLAPLHGW---------GLDPY
MMAR_1913|M.marinum_M HD-------------------LITGVVAPLAPLHGW---------GPDPY
MAV_5292|M.avium_104 TDAISWIGESGSGLP----NGLNETLGGPLGPFAGL---------GTDP-
MUL_5057|M.ulcerans_Agy99 TDPVSWIGES-SGVPGELLKGKLREYGVPIPLDAGL---------GRDP-
Mvan_0049|M.vanbaalenii_PYR-1 TDPVGWLGQMGNTLP----GELNDSLGNMVGPTAGL---------GADP-
MSMEG_6381|M.smegmatis_MC2_155 GDPISGD------------PTWNGVPLPSAGDLGQF---------GPNP-
TH_2466|M.thermoresistible__bu ND-----------------------IVANLGRYG-----------AVIPS
Mflv_3088|M.gilvum_PYR-GCK APG-------------------DFIELVQGIPGGPH---------GADPD
MAB_0252|M.abscessus_ATCC_1997 GDPIAIVQSLPRDVRLSDVPGVDQIPGIPHNVEGRIGNPLGGLPSATDPD
. *
Mb2820c|M.bovis_AF2122/97 LTPGFTELSS----QAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMS
Rv2797c|M.tuberculosis_H37Rv LTPGFTELSS----QAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMS
MMAR_1913|M.marinum_M LTPGLTELSS----QAGFDPGGIWRDGVYAHGDYPRVFQDAAGQPQLRMS
MAV_5292|M.avium_104 AHAGFGAARF----RAEVAGSHSVMPWFTDHSDYYDVGSEALHNMTEIVT
MUL_5057|M.ulcerans_Agy99 AGDGFGSVRF----HAEVPGSGTMD--RHDHSHYYVMGSESLRSITDISS
Mvan_0049|M.vanbaalenii_PYR-1 AFEDFGATRF----RAEVPGADMIDP--SDHSYYYTVGSESLRSMTEIVT
MSMEG_6381|M.smegmatis_MC2_155 LTLPLEQLSA----DAAVTPDGVSREGAVAHADYPRPVELPSGEKVLRTP
TH_2466|M.thermoresistible__bu ELPGFIDLST----NAESTPLGPRD-ASSGHSEYSFINKTALYNQAVVVA
Mflv_3088|M.gilvum_PYR-GCK EMDGVIGLP------TGFYDDGGLVAGWEAHSGMLNRPSGAWRTILDVLT
MAB_0252|M.abscessus_ATCC_1997 KIPGVTRLDTGYYGEFGKHPNQVIVGPDGHGSYWDDPSSDAFHNIAAVIG
. . .
Mb2820c|M.bovis_AF2122/97 GYNLAAIAAGLPDN----------------TVGPPLLP------PILGGG
Rv2797c|M.tuberculosis_H37Rv GYNLAAIAAGLPDN----------------TVGPPLLP------PILGGG
MMAR_1913|M.marinum_M GYNLAAIAAGLPDN----------------KVGAPLLP------PVLGGG
MAV_5292|M.avium_104 GRGNELAAEGMLAPDRNAARVSILGRVHT-PLGTLSLPRVEIRMPVVVDP
MUL_5057|M.ulcerans_Agy99 GHPDRLASDDLIAE----------GRRQP-HVGPLRVP----GVPAYIDP
Mvan_0049|M.vanbaalenii_PYR-1 GNGGRLDELGLLAQPRTELTVSTPQQLDVPVLGEVPLPHLEVETPVIYDP
MSMEG_6381|M.smegmatis_MC2_155 AYNLAVIAAGLADV-----------------------------------P
TH_2466|M.thermoresistible__bu GLGQDDRFIRVED-------------------------------------
Mflv_3088|M.gilvum_PYR-GCK GDPGTLSSASSIPAGG----------------------------------
MAB_0252|M.abscessus_ATCC_1997 GGEATGYVERGIQTNYVDINVGDDGNFRAEAWDQSRAAAGAQVPGLPWDD
.
Mb2820c|M.bovis_AF2122/97 MPAAPGPALRGGR----------------
Rv2797c|M.tuberculosis_H37Rv MPAAPGPALRGGR----------------
MMAR_1913|M.marinum_M MPAAPGHVLAGGH----------------
MAV_5292|M.avium_104 EWERPARSVTNEHGF--------------
MUL_5057|M.ulcerans_Agy99 ESDRPRDTVHDDHHYPAYQPPR-------
Mvan_0049|M.vanbaalenii_PYR-1 EWNRAGGSVTNDHGY--------------
MSMEG_6381|M.smegmatis_MC2_155 GPNGEDRLVR-------------------
TH_2466|M.thermoresistible__bu -----------------------------
Mflv_3088|M.gilvum_PYR-GCK -----------------------------
MAB_0252|M.abscessus_ATCC_1997 PGTIDRRHHPWDNPRVTDHPEHGQKIQVK