For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1352 | pyrR | - | 100% (189) | PROBABLE PYRIMIDINE OPERON REGULATORY PROTEIN PYRR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1414 | pyrR | 8e-84 | 84.74% (190) | bifunctional pyrimidine regulatory protein PyrR uracil |
M. gilvum PYR-GCK | Mflv_3748 | - | 4e-77 | 79.12% (182) | pyrimidine regulatory protein PyrR |
M. tuberculosis H37Rv | Rv1379 | pyrR | 8e-84 | 84.74% (190) | bifunctional pyrimidine regulatory protein PyrR uracil |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2832c | - | 4e-76 | 82.86% (175) | PyrR bifunctional protein (pyrimidine operon regulatory |
M. marinum M | MMAR_2194 | pyrR | 4e-81 | 80.32% (188) | pyrimidine operon regulatory protein PyrR |
M. avium 104 | MAV_3394 | - | 9e-84 | 86.19% (181) | pyrimidine regulatory protein PyrR |
M. smegmatis MC2 155 | MSMEG_3042 | - | 3e-82 | 84.62% (182) | pyrimidine regulatory protein PyrR |
M. ulcerans Agy99 | MUL_1779 | pyrR | 3e-80 | 79.79% (188) | bifunctional pyrimidine regulatory protein PyrR uracil |
M. vanbaalenii PYR-1 | Mvan_2659 | - | 1e-76 | 78.57% (182) | pyrimidine regulatory protein PyrR |
CLUSTAL 2.0.9 multiple sequence alignment Mb1414|M.bovis_AF2122/97 MGAAGDAAIGRESRELMSAADVGRTISRIAHQIIEKTALDDPVGPDAPRV Rv1379|M.tuberculosis_H37Rv MGAAGDAAIGRESRELMSAADVGRTISRIAHQIIEKTALDDPVGPDAPRV MAV_3394|M.avium_104 MGAAGNTGSSGDSRELMSAADVGRTVSRIAHQIIEKTALD---GPDGPRV MMAR_2194|M.marinum_M MGAANDAVDG---RELMSAADVGRTISRIAHQIIEKTALD---SPDSPRV MUL_1779|M.ulcerans_Agy99 MGAANDAVDG---RELMSAAVVGRTISRIAHQIIEKTALD---SPDSPRV TH_1352|M.thermoresistible__bu --VGSMADGSDAARELLSAADVGRTISRIAHQIIEKTALDG--P-DAPRV MSMEG_3042|M.smegmatis_MC2_155 -----MGS-SSTDRELLSAADVGRTVSRIAHQIIEKTALDD--PAERTRV MAB_2832c|M.abscessus_ATCC_199 ---------------MLSAADVGRTISRIAHQIIEKTALSD--SGDAPRV Mflv_3748|M.gilvum_PYR-GCK ---MGAPDQSGSDRELMSAADVSRTIARIAHQIIEKTALD---GPDGPRV Mvan_2659|M.vanbaalenii_PYR-1 ---MGAPDQTGPDRELMSAADVSRTIARIAHQIIEKTALD---GPDGPRV ::*** *.**::************. : .** Mb1414|M.bovis_AF2122/97 VLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMIKPPRPL Rv1379|M.tuberculosis_H37Rv VLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMIKPPRPL MAV_3394|M.avium_104 VLLGIPTRGVTLADRLARNIGEYSGVEVGHGALDITLYRDDLMQKPPRPL MMAR_2194|M.marinum_M VLLGIPTRGVILASRLAANIGEYSGIEVDHGALDITLYRDDLMSKPPRPL MUL_1779|M.ulcerans_Agy99 VLLGIPTRGVILASRLAANIGEYSGIEVDHGALDITLYRDDLMSKPPRPL TH_1352|M.thermoresistible__bu VLLGIPTRGVTLADRLATKIREFSGVQVPHGALDITLYRDDLNIKPPRPL MSMEG_3042|M.smegmatis_MC2_155 VLLGIPTRGVILATRLAAKIKEFAGEDVPHGALDITLYRDDLNFKPPRPL MAB_2832c|M.abscessus_ATCC_199 VLVGIPTRGATLAKRLAAHITEFSGVEVPAGFLDITLYRDDLRNKPHRPL Mflv_3748|M.gilvum_PYR-GCK ILLGIPTRGVTLASRLATNIAEFSGVQVAHGALDTTLYRDDLMTKPPRAL Mvan_2659|M.vanbaalenii_PYR-1 ILLGIPTRGVTLATRLARNIAEFSGVEVAHGALDITLYRDDLMTKPPRAL :*:******. ** *** :* *::* .* * ** ******* ** *.* Mb1414|M.bovis_AF2122/97 ASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLV Rv1379|M.tuberculosis_H37Rv ASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLV MAV_3394|M.avium_104 EATSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRVVQLAVLV MMAR_2194|M.marinum_M EETEIPAGGVDDALVILVDDVLYSGRSVRSALDALRDVGRPRSVQLAVLV MUL_1779|M.ulcerans_Agy99 EETEIPAGGVDDALVILVDDVLYSGRSVRSALDALRDVGRPRSVQLAVLV TH_1352|M.thermoresistible__bu EDTTIPEGGIDDALVILVDDVLFSGRSVRSALDALRDIGRPRAVQLAVLV MSMEG_3042|M.smegmatis_MC2_155 EATSIPAGGVDDAIVILVDDVLYSGRSVRSALDALRDIGRPRIVQLAVLV MAB_2832c|M.abscessus_ATCC_199 ERTSIPEGGVDGALVVLVDDVLFSGRTVRSALDALRDLGRPRAVQLAVLV Mflv_3748|M.gilvum_PYR-GCK AETSIPAGGIDGALVILVDDVLYTGRSVRSALDALRDLGRPKAVQLAVLV Mvan_2659|M.vanbaalenii_PYR-1 AATSIPEGGIDGALVVLVDDVLYSGRSVRSALDALRDLGRPKSVQLAVLV * ** **:*.*:*:******::**:**********:***: ******* Mb1414|M.bovis_AF2122/97 DRGHRELPLRADYVGKNVPTSRSESVHVRLREHDGRDGVVISR------ Rv1379|M.tuberculosis_H37Rv DRGHRELPLRADYVGKNVPTSRSESVHVRLREHDGRDGVVISR------ MAV_3394|M.avium_104 DRGHRELPLRAEYVGKNVPTSRSESVHVLLAEHDGADGVVISR------ MMAR_2194|M.marinum_M DRGHRELPVRADYVGKNVPTARSESVHVQFSEHDGHDGVVISR------ MUL_1779|M.ulcerans_Agy99 DRGHRELPVRADYVGKNVPTARSESVHVQFSEHDGHDGVVISR------ TH_1352|M.thermoresistible__bu DRGHRELPLRADYVGKNVPTSRSESVRVLLREHDDRDGVVISR------ MSMEG_3042|M.smegmatis_MC2_155 DRGHRELPIRADYVGKNVPTSRSESVHVLLSEHDDRDGVVISK------ MAB_2832c|M.abscessus_ATCC_199 DRGHRELPLRADYVGKNVPTARSEDVKVLLAEHDGRDAVIITSGQGAQT Mflv_3748|M.gilvum_PYR-GCK DRGHRELPIRADYVGKNVPTSRSENVKVRLTENDGVDIIAIAPYGGPPR Mvan_2659|M.vanbaalenii_PYR-1 DRGHRELPIRADYVGKNVPTSRAENVKVRLTEDDGHDGVRIAPYGGPAR ********:**:********:*:*.*:* : *.*. * : *: