For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1185 | - | 100% (399) | PROBABLE CYSTEINE DESULFURASE ISCS (NIFS PROTEIN HOMOLOG) (NITROGENASE METALLOCLUSTERS BIOSYNTHESIS PROTEIN NIFS) | |
| M. thermoresistible (build 8) | TH_3033 | - | 4e-31 | 29.93% (401) | PUTATIVE cysteine desulfurases, SufS subfamily |
| M. thermoresistible (build 8) | TH_1723 | - | 9e-11 | 32.39% (176) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3051c | iscS | 1e-171 | 75.70% (391) | cysteine desulfurase IscS |
| M. gilvum PYR-GCK | Mflv_4255 | - | 1e-173 | 77.04% (392) | aminotransferase, class V |
| M. tuberculosis H37Rv | Rv3025c | iscS | 1e-171 | 75.70% (391) | cysteine desulfurase IscS |
| M. leprae Br4923 | MLBr_01708 | - | 1e-169 | 76.03% (388) | putative aminotransferase |
| M. abscessus ATCC 19977 | MAB_3357c | - | 1e-156 | 70.59% (391) | putative aminotransferase/cysteine desulfurase |
| M. marinum M | MMAR_1689 | iscS | 1e-175 | 77.89% (389) | cysteine desulfurase IscS |
| M. avium 104 | MAV_3872 | - | 1e-176 | 78.41% (389) | cysteine desulfurase |
| M. smegmatis MC2 155 | MSMEG_2357 | - | 0.0 | 82.05% (390) | cysteine desulfurase |
| M. ulcerans Agy99 | MUL_1927 | iscS | 1e-175 | 77.89% (389) | cysteine desulfurase IscS |
| M. vanbaalenii PYR-1 | Mvan_2105 | - | 1e-173 | 75.95% (395) | aminotransferase, class V |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4255|M.gilvum_PYR-GCK MRWSRERDRGARPRGRYPGTAMSASAAAPRPVYLDHAATTPMRPAAIEAM
Mvan_2105|M.vanbaalenii_PYR-1 ----------------MPG---------PAPVYLDHAATTPMRPGAIEAM
Mb3051c|M.bovis_AF2122/97 ------------------------------MAYLDHAATTPMHPAAIEAM
Rv3025c|M.tuberculosis_H37Rv ------------------------------MAYLDHAATTPMHPAAIEAM
MLBr_01708|M.leprae_Br4923 ----------------MIRQAPIAGILKCVMAYLDHAATTPMHPAAIEAM
MAV_3872|M.avium_104 ------------------------------MVYLDHAATTPMHPAAVEAM
MMAR_1689|M.marinum_M ------------------------------MVYLDHAATTPMHPTAIEAM
MUL_1927|M.ulcerans_Agy99 ------------------------------MVYLDHAATTPMHPTAIEAM
TH_1185|M.thermoresistible__bu -------------------------MNTPQTVYLDHAATTPMYPAAITAM
MSMEG_2357|M.smegmatis_MC2_155 -----------------------MTSTAGRQVYLDHAATTPMHPAAIEAM
MAB_3357c|M.abscessus_ATCC_199 ---------------------------MSRSVYLDHAATTPMRPDAIEAM
.********** * *: **
Mflv_4255|M.gilvum_PYR-GCK TAALATVGNASSLHGSGRTARRRLEESRETLAQLLGARPSEVIFTAGGTE
Mvan_2105|M.vanbaalenii_PYR-1 TAALATVGNAASLHGSGRLARRRLEESRETLARLLGARPSEVIFTAGGTE
Mb3051c|M.bovis_AF2122/97 AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTE
Rv3025c|M.tuberculosis_H37Rv AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTE
MLBr_01708|M.leprae_Br4923 TTALGTVGNASSLHTSGRVARRRIEESRELIADKLAARPSEVIFTAGGTE
MAV_3872|M.avium_104 TAVLGTVGNASSLHTSGRAARRRIEESRELVADKLGARPSEVIFTAGGTE
MMAR_1689|M.marinum_M MAVLATVGNASSLHTTGRAARRRLEESRELIAAKLGARPSEVIFTAGGTE
MUL_1927|M.ulcerans_Agy99 TAVLATVGNASSLHTTGRAARRRLEESRELIAAKLGARPSEVIFTAGGTE
TH_1185|M.thermoresistible__bu TDVMSTVGNASSLHSSGRVARRRMEEARETLARLLGARPSEVVFTAGGTE
MSMEG_2357|M.smegmatis_MC2_155 TAVLAGVGNASSLHGSGRAARRRMEEAREALARLLGARPSEIIFTTGGTE
MAB_3357c|M.abscessus_ATCC_199 AATMAQTGNAASLHGAGRDARRRVEESRESIAAALGARPSEVIFTAGGTE
. ***:*** :** ****:**:** :* *.*****::**:****
Mflv_4255|M.gilvum_PYR-GCK SDNLAVKGIYWARRDAEPQRRRIVTTPVEHHAVLDAVQWLADHEGAEVTW
Mvan_2105|M.vanbaalenii_PYR-1 SDNLVVKGIYWARRASSPKRRRIITTPVEHHAVLDAVEWLVEHEDAEVTW
Mb3051c|M.bovis_AF2122/97 SDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTW
Rv3025c|M.tuberculosis_H37Rv SDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTW
MLBr_01708|M.leprae_Br4923 SDNLAVKGIYWARRDAQPCHRRIVTTEVEHHAVLDSVNWLVEHEGAEVTW
MAV_3872|M.avium_104 SDNLAVKGIYWARRDAEPRQRRIVTSEVEHHAVLDSVNWLVEHEGAEVTW
MMAR_1689|M.marinum_M SDNLAVKGMYWARRDAQPARRRIVTTRVEHHAVLDTVDWLVEHEGAEVTW
MUL_1927|M.ulcerans_Agy99 SDNLAVKGMYWARRDAQPARRRIVTTRVEHHAVLDTVDWLVEHEGAEVTW
TH_1185|M.thermoresistible__bu SDNLAVKGLYWARRAASPGLRRIITTRVEHHAVLDAVDWLVQHEGAEVTW
MSMEG_2357|M.smegmatis_MC2_155 SDNLAVKGIYWARHDADPARRRIITTAVEHHAVLDAVEWLVAHEGAEVTW
MAB_3357c|M.abscessus_ATCC_199 SDNLAVKGIYWARRGADARRRRIIASAVEHHAVLDAVQWLADHEGAAVTW
****.***:****: :.. ***::: ********:*:**. **.* ***
Mflv_4255|M.gilvum_PYR-GCK LPVDQYGAVNPADLRVALSE-TADVALVSVMWANNEVGTIQPIAELAAIA
Mvan_2105|M.vanbaalenii_PYR-1 LPVDEFGAVGAADLRTALAD-PDDVALISVMWANNEVGTIMPIHELASVA
Mb3051c|M.bovis_AF2122/97 LPTAADGSVSATALREALQS-HDDVALVSVMWANNEVGTILPIAEMSVVA
Rv3025c|M.tuberculosis_H37Rv LPTAADGSVSATALREALQS-HDDVALVSVMWANNEVGTILPIAEMSVVA
MLBr_01708|M.leprae_Br4923 LPTAADGSVSAFGLREALQQ-HNDVALVSVMWANNEVGTVMPVVELAAVA
MAV_3872|M.avium_104 LPTAADGSVSPAALREVLTR-HDDVALVSVMWANNEVGTVQPVAELAAVA
MMAR_1689|M.marinum_M LPTDADGSVSASALRDALES-HDDVALVSVMWANNEVGTIMPIAELAGVA
MUL_1927|M.ulcerans_Agy99 LPTDADGSVSASALRDALES-HDDVALVSVMWANNEVGTIMPIAELAGVA
TH_1185|M.thermoresistible__bu LPVEPDGSVTPATLREALRA-HDDVALVTLMWANNEVGTVSPIAELAAVA
MSMEG_2357|M.smegmatis_MC2_155 LPVDRDGAVSPAALREALQAGAHDVALVSVMWANNEVGTIMPIAELAAVA
MAB_3357c|M.abscessus_ATCC_199 LPVDQAGTVTPGALRAALAE-HDDVALITVMWANNEVGTINPIYELSSIA
**. *:* . ** .* ****:::*********: *: *:: :*
Mflv_4255|M.gilvum_PYR-GCK TEFGVPMHSDAIQAIGQLPVDFGASGLSAMSVAAHKFGGPAGVGALLLRR
Mvan_2105|M.vanbaalenii_PYR-1 AEFEIPMHSDAIQVVGQLPVDFAASGLSAMSVTAHKFGGPIGVGALLLRR
Mb3051c|M.bovis_AF2122/97 MEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRR
Rv3025c|M.tuberculosis_H37Rv MEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRR
MLBr_01708|M.leprae_Br4923 AEFGVPMHSDAIQAVGQLPVKFGVSGLSAMSVAAHKFGGPPGVGALLLRR
MAV_3872|M.avium_104 AEFGVPMHSDAVQAVGQLPVDFTASGLSAMSVTAHKFGGPPAVGALLLRR
MMAR_1689|M.marinum_M AEFGVPMHSDAVQAVGQVPVDFGACGLAAMSVTAHKFGGPPGAGALLMRR
MUL_1927|M.ulcerans_Agy99 AEFGVPMHSDAVQAVGQIPVDFGACGLAAMSVTAHKFGGPPGAGALLMRR
TH_1185|M.thermoresistible__bu AEFSVPMHSDAVQAVGHLPVDFSASGLSAMSISAHKFGGPTGVGALLIRR
MSMEG_2357|M.smegmatis_MC2_155 AEFGVPMHSDAVQAVGQIPVNFGASGLAAMSVTAHKFGGPTGVGALLLRR
MAB_3357c|M.abscessus_ATCC_199 AEFDVPMHSDAIGAVGQLDVDFALSGLSAISVAAHKFGGPMGVGALLLRR
** :******: .:*:: :.* .**:*:*::.****** ..****:**
Mflv_4255|M.gilvum_PYR-GCK DTACVPQLHGGGQERDVRSGTQDVAGVIGMAVAARDAADTMEPVIARVRD
Mvan_2105|M.vanbaalenii_PYR-1 ETACVPLLHGGGQERDVRSGTQDVPGAVGMAAAAQIAADTMDSAAEKVRA
Mb3051c|M.bovis_AF2122/97 DVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRL
Rv3025c|M.tuberculosis_H37Rv DVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRL
MLBr_01708|M.leprae_Br4923 DISCVPLLHGGGQERDIRSGTPGVASVVGMAAAAQIAVDGLEINSIRLQV
MAV_3872|M.avium_104 DVACVPLAHGGGQERDIRSGTADVAGAVGMAAAARISVDGLETNSARLRA
MMAR_1689|M.marinum_M DVSCVPLLHGGGQERDIRSGTPDVASAVGMAAAARIAVDGLEANSARLQT
MUL_1927|M.ulcerans_Agy99 DVSCVPLLHGGGQERDIRSGTPDVASAVGIAAAARIAVDGLEANSARLQT
TH_1185|M.thermoresistible__bu DAECVPLLHGGGQERDIRSGTPHVAGVVAMAVAAEAAIENLPAVSARIAA
MSMEG_2357|M.smegmatis_MC2_155 DTACVPLLHGGGQERDVRSGTPDVAGVVAMATAAGVAIENLADNSARVRA
MAB_3357c|M.abscessus_ATCC_199 EIACVPLLHGGGHERDIRSGTPDTAAIVAMSTALVAAVAERCESAAAMAG
: *** ****:***:**** ... :.::.* : :
Mflv_4255|M.gilvum_PYR-GCK LRDRLVAGVLESIDDVDVNGAPGPGRLPGNAHFTFRGCEGDSLLMLLDAK
Mvan_2105|M.vanbaalenii_PYR-1 LRDRLIDGVLDAVDDVDVNGAPGAGRLPGNAHFTFRGCEGDSLLMLLDAK
Mb3051c|M.bovis_AF2122/97 LRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDAN
Rv3025c|M.tuberculosis_H37Rv LRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDAN
MLBr_01708|M.leprae_Br4923 LRDRLIEGVLATIDDVALNGARDRMRLPGNAHFIFRGCEGDVLLMLLDAN
MAV_3872|M.avium_104 LRDRLVDGVLGGIEDVTLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN
MMAR_1689|M.marinum_M LRDRLVAGVLAEIDDVRLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN
MUL_1927|M.ulcerans_Agy99 LRDRLVAGVLAEIDDVRLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN
TH_1185|M.thermoresistible__bu LRDRLIDGVLTGIDDAYLNGARGADRLPGNAHFTFRGCEGDSLLMLLDAN
MSMEG_2357|M.smegmatis_MC2_155 LRDRLIDGVLSAIEDAQLNGARGDARLPGNAHFTFHGCEGDSLLMLLDAK
MAB_3357c|M.abscessus_ATCC_199 LRDSLIDQVLTQIEGATLNGAPGSGRLPGNAHFTFAGCEGDSLLMLLDAN
*** *: ** ::.. :*** . **.***** * ***** *******:
Mflv_4255|M.gilvum_PYR-GCK GIECSTGSACTAGVAQPSHVLTAMGVDPASARGSLRLSLGHTSTEADIEA
Mvan_2105|M.vanbaalenii_PYR-1 GIECSTGSACTAGVAQPSHVLTAMGADPVSARGSLRLSLGHTSTDADIDA
Mb3051c|M.bovis_AF2122/97 GIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDA
Rv3025c|M.tuberculosis_H37Rv GIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDA
MLBr_01708|M.leprae_Br4923 GIECSTGSACTSGVPQPSHVLIAMGADPASARGSLRLSLGHNSVEVDVEE
MAV_3872|M.avium_104 GIECSTGSACTAGVAQPSHVLVAMGVDPASARGSLRLSLGHTSIDADVDA
MMAR_1689|M.marinum_M GIECSTGSACTAGVAQPSHVLIAMGADPASARGSLRLSLGHTTVEADVDA
MUL_1927|M.ulcerans_Agy99 GIECSTGSACTAGVAQPSHVLIAMGADPASARGSLRLSLGHTTVEADVDA
TH_1185|M.thermoresistible__bu GIECSTGSACTAGVAQPSHVLIAMGADSASARGSLRLSLGHTSTEADVDA
MSMEG_2357|M.smegmatis_MC2_155 GVECSTGSACTAGVAQASHVLIAMGADAVKARGSLRLSLGHTSTEADVDT
MAB_3357c|M.abscessus_ATCC_199 GIECSTGSACTAGVARPSHVLIEMGIDPEVARGSLRFTFGHTSVPSDVDR
*:*********:**.:.**** ** *. ******:::**.: *::
Mflv_4255|M.gilvum_PYR-GCK VLEVLPAAVDRARQAALASSGRH----
Mvan_2105|M.vanbaalenii_PYR-1 VLDVLPAAVERARQAALASSGRR----
Mb3051c|M.bovis_AF2122/97 ALEVLPGAVARARRAALAAAGASR---
Rv3025c|M.tuberculosis_H37Rv ALEVLPGAVARARRAALAAAGASR---
MLBr_01708|M.leprae_Br4923 VLRVLPGAVDRARRASLAAAGAGGVGV
MAV_3872|M.avium_104 VLRVLPGAVERARRAALAAAGAS----
MMAR_1689|M.marinum_M ALQVLPAAVARARSAAVAAAGAAW---
MUL_1927|M.ulcerans_Agy99 ALQVLPAAVARARSAAVAAAGAAW---
TH_1185|M.thermoresistible__bu ALAVLPAAVERARQAALASAG-VDK--
MSMEG_2357|M.smegmatis_MC2_155 ALEVLPAAVERARQAALASAGTVSR--
MAB_3357c|M.abscessus_ATCC_199 ALEALHAAVPRARAAALASAGGRS---
.* .* .** *** *::*::*