For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRSVYLDHAATTPMRPDAIEAMAATMAQTGNAASLHGAGRDARRRVEESRESIAAALGARPSEVIFTAGG TESDNLAVKGIYWARRGADARRRRIIASAVEHHAVLDAVQWLADHEGAAVTWLPVDQAGTVTPGALRAAL AEHDDVALITVMWANNEVGTINPIYELSSIAAEFDVPMHSDAIGAVGQLDVDFALSGLSAISVAAHKFGG PMGVGALLLRREIACVPLLHGGGHERDIRSGTPDTAAIVAMSTALVAAVAERCESAAAMAGLRDSLIDQV LTQIEGATLNGAPGSGRLPGNAHFTFAGCEGDSLLMLLDANGIECSTGSACTAGVARPSHVLIEMGIDPE VARGSLRFTFGHTSVPSDVDRALEALHAAVPRARAAALASAGGRS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3357c | - | - | 100% (396) | putative aminotransferase/cysteine desulfurase |
M. abscessus ATCC 19977 | MAB_4673c | - | 4e-58 | 37.82% (386) | putative aminotransferase/cysteine desulfhydrase |
M. abscessus ATCC 19977 | MAB_1093c | - | 8e-53 | 35.90% (376) | putative L-cysteine desulfurase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3051c | iscS | 1e-152 | 70.36% (388) | cysteine desulfurase IscS |
M. gilvum PYR-GCK | Mflv_4255 | - | 1e-158 | 71.61% (391) | aminotransferase, class V |
M. tuberculosis H37Rv | Rv3025c | iscS | 1e-152 | 70.36% (388) | cysteine desulfurase IscS |
M. leprae Br4923 | MLBr_01708 | - | 1e-145 | 67.27% (388) | putative aminotransferase |
M. marinum M | MMAR_1689 | iscS | 1e-153 | 69.67% (389) | cysteine desulfurase IscS |
M. avium 104 | MAV_3872 | - | 1e-153 | 69.15% (389) | cysteine desulfurase |
M. smegmatis MC2 155 | MSMEG_2357 | - | 1e-157 | 71.68% (392) | cysteine desulfurase |
M. thermoresistible (build 8) | TH_1185 | - | 1e-156 | 70.59% (391) | PROBABLE CYSTEINE DESULFURASE ISCS (NIFS PROTEIN HOMOLOG) |
M. ulcerans Agy99 | MUL_1927 | iscS | 1e-152 | 69.41% (389) | cysteine desulfurase IscS |
M. vanbaalenii PYR-1 | Mvan_2105 | - | 1e-158 | 71.36% (391) | aminotransferase, class V |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2357|M.smegmatis_MC2_155 -----------------------MTSTAGRQVYLDHAATTPMHPAAIEAM TH_1185|M.thermoresistible__bu -------------------------MNTPQTVYLDHAATTPMYPAAITAM Mb3051c|M.bovis_AF2122/97 ------------------------------MAYLDHAATTPMHPAAIEAM Rv3025c|M.tuberculosis_H37Rv ------------------------------MAYLDHAATTPMHPAAIEAM MLBr_01708|M.leprae_Br4923 ----------------MIRQAPIAGILKCVMAYLDHAATTPMHPAAIEAM MAV_3872|M.avium_104 ------------------------------MVYLDHAATTPMHPAAVEAM MMAR_1689|M.marinum_M ------------------------------MVYLDHAATTPMHPTAIEAM MUL_1927|M.ulcerans_Agy99 ------------------------------MVYLDHAATTPMHPTAIEAM Mflv_4255|M.gilvum_PYR-GCK MRWSRERDRGARPRGRYPGTAMSASAAAPRPVYLDHAATTPMRPAAIEAM Mvan_2105|M.vanbaalenii_PYR-1 ----------------MPG---------PAPVYLDHAATTPMRPGAIEAM MAB_3357c|M.abscessus_ATCC_199 ---------------------------MSRSVYLDHAATTPMRPDAIEAM .********** * *: ** MSMEG_2357|M.smegmatis_MC2_155 TAVLAGVGNASSLHGSGRAARRRMEEAREALARLLGARPSEIIFTTGGTE TH_1185|M.thermoresistible__bu TDVMSTVGNASSLHSSGRVARRRMEEARETLARLLGARPSEVVFTAGGTE Mb3051c|M.bovis_AF2122/97 AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTE Rv3025c|M.tuberculosis_H37Rv AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTE MLBr_01708|M.leprae_Br4923 TTALGTVGNASSLHTSGRVARRRIEESRELIADKLAARPSEVIFTAGGTE MAV_3872|M.avium_104 TAVLGTVGNASSLHTSGRAARRRIEESRELVADKLGARPSEVIFTAGGTE MMAR_1689|M.marinum_M MAVLATVGNASSLHTTGRAARRRLEESRELIAAKLGARPSEVIFTAGGTE MUL_1927|M.ulcerans_Agy99 TAVLATVGNASSLHTTGRAARRRLEESRELIAAKLGARPSEVIFTAGGTE Mflv_4255|M.gilvum_PYR-GCK TAALATVGNASSLHGSGRTARRRLEESRETLAQLLGARPSEVIFTAGGTE Mvan_2105|M.vanbaalenii_PYR-1 TAALATVGNAASLHGSGRLARRRLEESRETLARLLGARPSEVIFTAGGTE MAB_3357c|M.abscessus_ATCC_199 AATMAQTGNAASLHGAGRDARRRVEESRESIAAALGARPSEVIFTAGGTE . ***:*** :** ****:**:** :* *.*****::**:**** MSMEG_2357|M.smegmatis_MC2_155 SDNLAVKGIYWARHDADPARRRIITTAVEHHAVLDAVEWLVAHEGAEVTW TH_1185|M.thermoresistible__bu SDNLAVKGLYWARRAASPGLRRIITTRVEHHAVLDAVDWLVQHEGAEVTW Mb3051c|M.bovis_AF2122/97 SDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTW Rv3025c|M.tuberculosis_H37Rv SDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTW MLBr_01708|M.leprae_Br4923 SDNLAVKGIYWARRDAQPCHRRIVTTEVEHHAVLDSVNWLVEHEGAEVTW MAV_3872|M.avium_104 SDNLAVKGIYWARRDAEPRQRRIVTSEVEHHAVLDSVNWLVEHEGAEVTW MMAR_1689|M.marinum_M SDNLAVKGMYWARRDAQPARRRIVTTRVEHHAVLDTVDWLVEHEGAEVTW MUL_1927|M.ulcerans_Agy99 SDNLAVKGMYWARRDAQPARRRIVTTRVEHHAVLDTVDWLVEHEGAEVTW Mflv_4255|M.gilvum_PYR-GCK SDNLAVKGIYWARRDAEPQRRRIVTTPVEHHAVLDAVQWLADHEGAEVTW Mvan_2105|M.vanbaalenii_PYR-1 SDNLVVKGIYWARRASSPKRRRIITTPVEHHAVLDAVEWLVEHEDAEVTW MAB_3357c|M.abscessus_ATCC_199 SDNLAVKGIYWARRGADARRRRIIASAVEHHAVLDAVQWLADHEGAAVTW ****.***:****: :.. ***::: ********:*:**. **.* *** MSMEG_2357|M.smegmatis_MC2_155 LPVDRDGAVSPAALREALQAGAHDVALVSVMWANNEVGTIMPIAELAAVA TH_1185|M.thermoresistible__bu LPVEPDGSVTPATLREALRA-HDDVALVTLMWANNEVGTVSPIAELAAVA Mb3051c|M.bovis_AF2122/97 LPTAADGSVSATALREALQS-HDDVALVSVMWANNEVGTILPIAEMSVVA Rv3025c|M.tuberculosis_H37Rv LPTAADGSVSATALREALQS-HDDVALVSVMWANNEVGTILPIAEMSVVA MLBr_01708|M.leprae_Br4923 LPTAADGSVSAFGLREALQQ-HNDVALVSVMWANNEVGTVMPVVELAAVA MAV_3872|M.avium_104 LPTAADGSVSPAALREVLTR-HDDVALVSVMWANNEVGTVQPVAELAAVA MMAR_1689|M.marinum_M LPTDADGSVSASALRDALES-HDDVALVSVMWANNEVGTIMPIAELAGVA MUL_1927|M.ulcerans_Agy99 LPTDADGSVSASALRDALES-HDDVALVSVMWANNEVGTIMPIAELAGVA Mflv_4255|M.gilvum_PYR-GCK LPVDQYGAVNPADLRVALSE-TADVALVSVMWANNEVGTIQPIAELAAIA Mvan_2105|M.vanbaalenii_PYR-1 LPVDEFGAVGAADLRTALAD-PDDVALISVMWANNEVGTIMPIHELASVA MAB_3357c|M.abscessus_ATCC_199 LPVDQAGTVTPGALRAALAE-HDDVALITVMWANNEVGTINPIYELSSIA **. *:* . ** .* ****:::*********: *: *:: :* MSMEG_2357|M.smegmatis_MC2_155 AEFGVPMHSDAVQAVGQIPVNFGASGLAAMSVTAHKFGGPTGVGALLLRR TH_1185|M.thermoresistible__bu AEFSVPMHSDAVQAVGHLPVDFSASGLSAMSISAHKFGGPTGVGALLIRR Mb3051c|M.bovis_AF2122/97 MEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRR Rv3025c|M.tuberculosis_H37Rv MEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRR MLBr_01708|M.leprae_Br4923 AEFGVPMHSDAIQAVGQLPVKFGVSGLSAMSVAAHKFGGPPGVGALLLRR MAV_3872|M.avium_104 AEFGVPMHSDAVQAVGQLPVDFTASGLSAMSVTAHKFGGPPAVGALLLRR MMAR_1689|M.marinum_M AEFGVPMHSDAVQAVGQVPVDFGACGLAAMSVTAHKFGGPPGAGALLMRR MUL_1927|M.ulcerans_Agy99 AEFGVPMHSDAVQAVGQIPVDFGACGLAAMSVTAHKFGGPPGAGALLMRR Mflv_4255|M.gilvum_PYR-GCK TEFGVPMHSDAIQAIGQLPVDFGASGLSAMSVAAHKFGGPAGVGALLLRR Mvan_2105|M.vanbaalenii_PYR-1 AEFEIPMHSDAIQVVGQLPVDFAASGLSAMSVTAHKFGGPIGVGALLLRR MAB_3357c|M.abscessus_ATCC_199 AEFDVPMHSDAIGAVGQLDVDFALSGLSAISVAAHKFGGPMGVGALLLRR ** :******: .:*:: :.* .**:*:*::.****** ..****:** MSMEG_2357|M.smegmatis_MC2_155 DTACVPLLHGGGQERDVRSGTPDVAGVVAMATAAGVAIENLADNSARVRA TH_1185|M.thermoresistible__bu DAECVPLLHGGGQERDIRSGTPHVAGVVAMAVAAEAAIENLPAVSARIAA Mb3051c|M.bovis_AF2122/97 DVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRL Rv3025c|M.tuberculosis_H37Rv DVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRL MLBr_01708|M.leprae_Br4923 DISCVPLLHGGGQERDIRSGTPGVASVVGMAAAAQIAVDGLEINSIRLQV MAV_3872|M.avium_104 DVACVPLAHGGGQERDIRSGTADVAGAVGMAAAARISVDGLETNSARLRA MMAR_1689|M.marinum_M DVSCVPLLHGGGQERDIRSGTPDVASAVGMAAAARIAVDGLEANSARLQT MUL_1927|M.ulcerans_Agy99 DVSCVPLLHGGGQERDIRSGTPDVASAVGIAAAARIAVDGLEANSARLQT Mflv_4255|M.gilvum_PYR-GCK DTACVPQLHGGGQERDVRSGTQDVAGVIGMAVAARDAADTMEPVIARVRD Mvan_2105|M.vanbaalenii_PYR-1 ETACVPLLHGGGQERDVRSGTQDVPGAVGMAAAAQIAADTMDSAAEKVRA MAB_3357c|M.abscessus_ATCC_199 EIACVPLLHGGGHERDIRSGTPDTAAIVAMSTALVAAVAERCESAAAMAG : *** ****:***:**** ... :.::.* : : MSMEG_2357|M.smegmatis_MC2_155 LRDRLIDGVLSAIEDAQLNGARGDARLPGNAHFTFHGCEGDSLLMLLDAK TH_1185|M.thermoresistible__bu LRDRLIDGVLTGIDDAYLNGARGADRLPGNAHFTFRGCEGDSLLMLLDAN Mb3051c|M.bovis_AF2122/97 LRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDAN Rv3025c|M.tuberculosis_H37Rv LRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDAN MLBr_01708|M.leprae_Br4923 LRDRLIEGVLATIDDVALNGARDRMRLPGNAHFIFRGCEGDVLLMLLDAN MAV_3872|M.avium_104 LRDRLVDGVLGGIEDVTLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN MMAR_1689|M.marinum_M LRDRLVAGVLAEIDDVRLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN MUL_1927|M.ulcerans_Agy99 LRDRLVAGVLAEIDDVRLNGARDPLRLPGNAHFTFRGCEGDALLMLLDAN Mflv_4255|M.gilvum_PYR-GCK LRDRLVAGVLESIDDVDVNGAPGPGRLPGNAHFTFRGCEGDSLLMLLDAK Mvan_2105|M.vanbaalenii_PYR-1 LRDRLIDGVLDAVDDVDVNGAPGAGRLPGNAHFTFRGCEGDSLLMLLDAK MAB_3357c|M.abscessus_ATCC_199 LRDSLIDQVLTQIEGATLNGAPGSGRLPGNAHFTFAGCEGDSLLMLLDAN *** *: ** ::.. :*** . **.***** * ***** *******: MSMEG_2357|M.smegmatis_MC2_155 GVECSTGSACTAGVAQASHVLIAMGADAVKARGSLRLSLGHTSTEADVDT TH_1185|M.thermoresistible__bu GIECSTGSACTAGVAQPSHVLIAMGADSASARGSLRLSLGHTSTEADVDA Mb3051c|M.bovis_AF2122/97 GIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDA Rv3025c|M.tuberculosis_H37Rv GIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDA MLBr_01708|M.leprae_Br4923 GIECSTGSACTSGVPQPSHVLIAMGADPASARGSLRLSLGHNSVEVDVEE MAV_3872|M.avium_104 GIECSTGSACTAGVAQPSHVLVAMGVDPASARGSLRLSLGHTSIDADVDA MMAR_1689|M.marinum_M GIECSTGSACTAGVAQPSHVLIAMGADPASARGSLRLSLGHTTVEADVDA MUL_1927|M.ulcerans_Agy99 GIECSTGSACTAGVAQPSHVLIAMGADPASARGSLRLSLGHTTVEADVDA Mflv_4255|M.gilvum_PYR-GCK GIECSTGSACTAGVAQPSHVLTAMGVDPASARGSLRLSLGHTSTEADIEA Mvan_2105|M.vanbaalenii_PYR-1 GIECSTGSACTAGVAQPSHVLTAMGADPVSARGSLRLSLGHTSTDADIDA MAB_3357c|M.abscessus_ATCC_199 GIECSTGSACTAGVARPSHVLIEMGIDPEVARGSLRFTFGHTSVPSDVDR *:*********:**.:.**** ** *. ******:::**.: *:: MSMEG_2357|M.smegmatis_MC2_155 ALEVLPAAVERARQAALASAGTVSR-- TH_1185|M.thermoresistible__bu ALAVLPAAVERARQAALASAG-VDK-- Mb3051c|M.bovis_AF2122/97 ALEVLPGAVARARRAALAAAGASR--- Rv3025c|M.tuberculosis_H37Rv ALEVLPGAVARARRAALAAAGASR--- MLBr_01708|M.leprae_Br4923 VLRVLPGAVDRARRASLAAAGAGGVGV MAV_3872|M.avium_104 VLRVLPGAVERARRAALAAAGAS---- MMAR_1689|M.marinum_M ALQVLPAAVARARSAAVAAAGAAW--- MUL_1927|M.ulcerans_Agy99 ALQVLPAAVARARSAAVAAAGAAW--- Mflv_4255|M.gilvum_PYR-GCK VLEVLPAAVDRARQAALASSGRH---- Mvan_2105|M.vanbaalenii_PYR-1 VLDVLPAAVERARQAALASSGRR---- MAB_3357c|M.abscessus_ATCC_199 ALEALHAAVPRARAAALASAGGRS--- .* .* .** *** *::*::*