For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0284 | - | - | 100% (271) | iron(III)-transport system permease protein SfuB |
M. thermoresistible (build 8) | TH_2990 | - | 1e-17 | 26.36% (258) | PUTATIVE sulfate ABC transporter, permease protein CysW |
M. thermoresistible (build 8) | TH_1446 | cysT | 1e-13 | 26.23% (244) | PROBABLE SULFATE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2420c | cysW | 4e-16 | 25.20% (254) | sulfate-transport integral membrane protein ABC transporter |
M. gilvum PYR-GCK | Mflv_3362 | - | 1e-107 | 80.00% (250) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv2398c | cysW | 9e-16 | 25.20% (254) | sulfate-transport integral membrane protein ABC transporter |
M. leprae Br4923 | MLBr_01087 | - | 5e-08 | 21.07% (280) | putative ABC-transport protein, inner membrane component |
M. abscessus ATCC 19977 | MAB_1654 | - | 8e-16 | 24.23% (260) | sulfate ABC transporter, permease protein CysW |
M. marinum M | MMAR_3716 | cysW | 6e-16 | 25.62% (242) | sulfate-transport integral membrane protein ABC transporter |
M. avium 104 | MAV_1784 | cysW | 5e-15 | 25.38% (260) | sulfate ABC transporter, permease protein CysW |
M. smegmatis MC2 155 | MSMEG_3635 | - | 1e-105 | 81.71% (246) | iron(III)-transport system permease protein SfuB |
M. ulcerans Agy99 | MUL_3659 | cysW | 3e-16 | 25.62% (242) | sulfate-transport integral membrane protein ABC transporter |
M. vanbaalenii PYR-1 | Mvan_3092 | - | 1e-111 | 81.35% (252) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3362|M.gilvum_PYR-GCK ----------------MSRLGRPPAGLLLPAALVAACTLVPLVYLFERAF Mvan_3092|M.vanbaalenii_PYR-1 -------------MPVITARSRPPALLLLPAALVAAGTLIPLVYLVERAL MSMEG_3635|M.smegmatis_MC2_155 -------------------------MLVAAGAAVVLATLVPLVYLGERAA TH_0284|M.thermoresistible__bu ------------VLLAARPRRRTPILLLMPAAAVVTATLLPLVYLVQRAL Mb2420c|M.bovis_AF2122/97 ---------------MTSLPAARYLVRSVALGYVFVLLIVPVALILWRTF Rv2398c|M.tuberculosis_H37Rv ---------------MTSLPAARYLVRSVALGYVFVLLIVPVALILWRTF MMAR_3716|M.marinum_M ---------------MTSSPLVRYLLRAIALTYVFALLVVPVGVILWRTF MUL_3659|M.ulcerans_Agy99 ---------------MTSSPLVRYLLRAIALTYVFALLVVPVGVILWRTF MAV_1784|M.avium_104 ---------------MTSSPGVRYGLRFVALAYIFVLLVIPVSLILWRTF MAB_1654|M.abscessus_ATCC_1997 ---------------MTLSPAVKYALRILALLYVAVLLIVPLGLILWRAF MLBr_01087|M.leprae_Br4923 MTAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSL . : *: : Mflv_3362|M.gilvum_PYR-GCK ER------------GLPFVVDELLQPRTAAMVGRSLLLVSVVTAACVVLG Mvan_3092|M.vanbaalenii_PYR-1 GR------------GWPFVVDELLQPRTAALVGRSLLLVAVVTAACVVLG MSMEG_3635|M.smegmatis_MC2_155 ER------------GWAFVFDELFQPRTAALVGRSLALVALVTAACVVLG TH_0284|M.thermoresistible__bu ER------------GWAFVLHELAQPRTAALIGRSLLLVVVVTAACVVLG Mb2420c|M.bovis_AF2122/97 EP------------GFGQFYAWISTPAAISALNLSLLVVAIVVPLNVIFG Rv2398c|M.tuberculosis_H37Rv EP------------GFGQFYAWISTPAAISALNLSLLVVAIVVPLNVIFG MMAR_3716|M.marinum_M EP------------GLGQFYDWISTPAAISALHLSLLLVAIVVPLNVIFG MUL_3659|M.ulcerans_Agy99 EP------------GLGQFYDWISTPAAISALHLSLLLVAIVVPLEVIFG MAV_1784|M.avium_104 RP------------GFGQFYAWVSTPAAISALNLTLLVVAIVVPLNVFFG MAB_1654|M.abscessus_ATCC_1997 AP------------GLVQFWEYISTPAAISAFNLSLLVVAIVVPLNVIFG MLBr_01087|M.leprae_Br4923 QRYSLATPNETVFIGLGNYQTILTDPYWWTALAVTLAITVVSVSIEFILG * : * : . :* :. : .. ..:* Mflv_3362|M.gilvum_PYR-GCK VGLAVLVTRTDLRGRRVLAVALTLPLAMP----SYLLAYLWVSA------ Mvan_3092|M.vanbaalenii_PYR-1 VGLAVLVTRTNLRGRRALAVSLTLPLAMP----SYLLAYLWVSA------ MSMEG_3635|M.smegmatis_MC2_155 VGLAVLVSRTDLRGRRVLAVVLTLPLAMP----SYLLAYLWVSA------ TH_0284|M.thermoresistible__bu VGFAVLVNRTDLVARRVLAVALTLPLAIP----SYLLAFLWVSL------ Mb2420c|M.bovis_AF2122/97 VTTALVLARNRFRGKGVLQAIIDLPFAVSPVIVGVSLILLWGSAG----A Rv2398c|M.tuberculosis_H37Rv VTTALVLARNRFRGKGVLQAIIDLPFAVSPVIVGVSLILLWGSAG----A MMAR_3716|M.marinum_M ILTALLLARNRFRGKGVLQAIIDLPFAVSPVIVGTALILLWGSAG----A MUL_3659|M.ulcerans_Agy99 IPTALLLARNRFRGKGVLQAIIDLPFAVSPVIVGTALILLWGSAG----A MAV_1784|M.avium_104 IPTALVLARNRFRGKGVLQAIIDLPFAVSPVIVGVALIVLWGSAG----A MAB_1654|M.abscessus_ATCC_1997 VPTALVLARNKFRGKGVLQAIIDLPFAVSPVIVGVALIVLWGSAG----L MLBr_01087|M.leprae_Br4923 LMLALVMHR-TLLGKSLVRIAVLIPYSIVTVVASYSWYYAWTPGTGYLAS : *::: * : .: : : :* :: . * . Mflv_3362|M.gilvum_PYR-GCK ---------FPTAAGFWGAALVLTLVSYPLVLLTTMAALARVDPAQEEVA Mvan_3092|M.vanbaalenii_PYR-1 ---------YPTITGFWGAALVLTLVSYPLVLLTTMAALARVDPAQEEVA MSMEG_3635|M.smegmatis_MC2_155 ---------YPQVAGFWGAALVLVLVSYPLVFLTTMAALSRVDPALEEVA TH_0284|M.thermoresistible__bu ---------VPTISGFWGSTLVLVLVSYPLVMLTTMAALSRVDPAQEEVA Mb2420c|M.bovis_AF2122/97 LGFVEQDLGFKIIFGLPGIVLASMFVTCPFVVREVEPVLHELGTDQEQAA Rv2398c|M.tuberculosis_H37Rv LGFVEQDLGFKIIFGLPGIVLGSMFVTCPFVVREVEPVLHELGTDQEQAA MMAR_3716|M.marinum_M LGFVERDLGIRIIFGLPGMVLASIFVTLPFVVREVEPVLHELGTDQEQAA MUL_3659|M.ulcerans_Agy99 LDFVERDLGIRIIFGLPGMVLASIFVTLPFVVREVEPVLHELGTDQEQAA MAV_1784|M.avium_104 LGFVEKDLGFKIIFGLPGIVLASIFVTLPFVVREVEPVLHELGTDQEEAA MAB_1654|M.abscessus_ATCC_1997 LGFVENDWKFKIIFGLPGIVLASIFVTLPFVIREVEPVLHEIGDDQEQAA MLBr_01087|M.leprae_Br4923 LLPQGSVPLTEQIPSLSIVIIVEVWKTTPFMSLLLLVGLALVPEDLLKAA .: : : *:: * : :.* Mflv_3362|M.gilvum_PYR-GCK RSLGLGGVATLFRVTLRQTRAAIAAGALLVALYVLSDFGAVAAMR----- Mvan_3092|M.vanbaalenii_PYR-1 RSLGLGGVAVLFRVTLRQARPAIAAGALLVALYVLSDFGAVAAMR----- MSMEG_3635|M.smegmatis_MC2_155 RSLGHGGFSVLFRVTLRQARGAITAGALLVALYVLSDFGAVAAMR----- TH_0284|M.thermoresistible__bu RSLGLGGWRVLFRVTLRQSRAAITAGALLVALYVLSDFGAVAAMR----- Mb2420c|M.bovis_AF2122/97 ATLGSGWWQTFWRITLPSIRWGLTYGIVLTVARTLGEYGAVIIVSSNLPG Rv2398c|M.tuberculosis_H37Rv ATLGSGWWQTFWRITLPSIRWGLTYGIVLTVARTLGEYGAVIIVSSNLPG MMAR_3716|M.marinum_M ATLGSGWWQTFWRITLPSIRWGLTYGIVLTVARTLGEYGAVLMVSSNLPG MUL_3659|M.ulcerans_Agy99 ATLGSGWWQTFWRITLPSIRWGLTYGIVLTVARTLGEYGAVLMVSSNLPG MAV_1784|M.avium_104 ATLGSGWWQTFWRITLPSIRWGLTYGIVLTIARSLGEYGAVLMVSSNLPG MAB_1654|M.abscessus_ATCC_1997 ATLGANPWQTFWRITLPSIRWGLTYGIVLTVARTLGEYGAVIMVSSGLPG MLBr_01087|M.leprae_Br4923 QMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNIYVLTRGVN- * . : :: * : .: . :: : :. : : Mflv_3362|M.gilvum_PYR-GCK -YEAFTWVIYGAYRSGFNPSRAAVLSLVLIVFAVLLVVGEHRARGVAAAG Mvan_3092|M.vanbaalenii_PYR-1 -FEAFTWVIYGAYRSGFNPSRAAVLSLVLMVFAVALVVAEHRARGRAAAS MSMEG_3635|M.smegmatis_MC2_155 -YEAFTWVIYGAYRSGFNPSRAAVLSLVLLVLAVLLVTAEARARGIAAA- TH_0284|M.thermoresistible__bu -YEAFTWVIYGAYRSGFNPSRAAVLALVLLVFAVVLVLAEARARGRAAAS Mb2420c|M.bovis_AF2122/97 TSQTLTLLVSDRYHRGAEYGAYALSTLLMAVSVVVLIVQMVLDAHRARAV Rv2398c|M.tuberculosis_H37Rv TSQTLTLLVSDRYHRGAEYGAYALSTLLMAVSVVVLIVQMVLDARRARAV MMAR_3716|M.marinum_M TSQTLTLLVSDRYHRGAEYGAYALSTLLMAVAVVVLIVQVALDVRRSRTT MUL_3659|M.ulcerans_Agy99 TSQTLTLLVSDRYHRGAGYGAYALSTLLMAVAVVVLIVQVALDVRRSRTT MAV_1784|M.avium_104 KSQTLTLLVSDRYNRGAEYGAYALSTLLMGVAVLVLVFQVVLDARRGRAA MAB_1654|M.abscessus_ATCC_1997 KSQTLTLLVSDRHLRGDEYGAYALSVVLMAVALIVLVVQVVLDRNRAKTS MLBr_01087|M.leprae_Br4923 NTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPG ::.: : . * . : ::: : . Mflv_3362|M.gilvum_PYR-GCK RIGGGAPRPAPVSRLGRWRWPALAVPAVVLTAALVVPGIELMDWLLAAGM Mvan_3092|M.vanbaalenii_PYR-1 RIGGGSPRPAPLNRLGPWSPLALLVPAAVLAAAVAVPTVELAGWLLTAGP MSMEG_3635|M.smegmatis_MC2_155 RIGGGTPRPAPLNRLGRWWPAALVAPIAVLMAAIGLPTVILVRWLLTAGA TH_0284|M.thermoresistible__bu RVGGGTPRXX-----------------------------------XRSGP Mb2420c|M.bovis_AF2122/97 SEG----------------------------------------------- Rv2398c|M.tuberculosis_H37Rv SEG----------------------------------------------- MMAR_3716|M.marinum_M SRA----------------------------------------------- MUL_3659|M.ulcerans_Agy99 SRA----------------------------------------------- MAV_1784|M.avium_104 RQA----------------------------------------------- MAB_1654|M.abscessus_ATCC_1997 K------------------------------------------------- MLBr_01087|M.leprae_Br4923 GDSNGY-------------------------------------------- Mflv_3362|M.gilvum_PYR-GCK QWNVGEWLGALGSTVWLSAAAALVSTAAALPLGVLAARHRDRVTRALEGA Mvan_3092|M.vanbaalenii_PYR-1 RWDVAEWLDALGSTVWLSAAAAVVSTAAALPLGVLAARHRDRATRTLEGA MSMEG_3635|M.smegmatis_MC2_155 RWDAQQWVDALTATLWLSFVTAIVCTFAALPLGVLAARYRDRVTRVLEGA TH_0284|M.thermoresistible__bu DWRR---------------------------------------------- Mb2420c|M.bovis_AF2122/97 -------------------------------------------------- Rv2398c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3716|M.marinum_M -------------------------------------------------- MUL_3659|M.ulcerans_Agy99 -------------------------------------------------- MAV_1784|M.avium_104 -------------------------------------------------- MAB_1654|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01087|M.leprae_Br4923 -------------------------------------------------- Mflv_3362|M.gilvum_PYR-GCK SFLAHGLPSIVIAISMVSLGVLLLRPIYQREPLLILAYAVLFVPMAIGSI Mvan_3092|M.vanbaalenii_PYR-1 SYVAHGLPAIVIAISMVSLGVLLLRPIYQREPLLILAYTVLFVPMAIGSI MSMEG_3635|M.smegmatis_MC2_155 SYVAHGLPAIVIGISMVSLGVLVLRPLYQREPLLILAYAVLLIPLAVGSV TH_0284|M.thermoresistible__bu -------------------------------------------------- Mb2420c|M.bovis_AF2122/97 -------------------------------------------------- Rv2398c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3716|M.marinum_M -------------------------------------------------- MUL_3659|M.ulcerans_Agy99 -------------------------------------------------- MAV_1784|M.avium_104 -------------------------------------------------- MAB_1654|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01087|M.leprae_Br4923 -------------------------------------------------- Mflv_3362|M.gilvum_PYR-GCK RASVQATPVRLEEVARSLGRPPVRAFATVTARVALPGIAAGAALVLLTCM Mvan_3092|M.vanbaalenii_PYR-1 RAAVEAAPIRLEEVARSLGRPPVRAFGAVTARVALPGIAAGAALVLLTCM MSMEG_3635|M.smegmatis_MC2_155 RAAIESTPARLEEVARSLGRNPLRAFTTVTARLSVPGIAAAAALVLLTCM TH_0284|M.thermoresistible__bu -------------------------------------------------- Mb2420c|M.bovis_AF2122/97 -------------------------------------------------- Rv2398c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3716|M.marinum_M -------------------------------------------------- MUL_3659|M.ulcerans_Agy99 -------------------------------------------------- MAV_1784|M.avium_104 -------------------------------------------------- MAB_1654|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01087|M.leprae_Br4923 -------------------------------------------------- Mflv_3362|M.gilvum_PYR-GCK KELPVTLLLHPTGTDTLATRLWGYSSISDYAAAAPYAAALLLFAAVPTAV Mvan_3092|M.vanbaalenii_PYR-1 KELPVTLLLHPTGTDTLATRLWGYSSVSDYAAAAPYAAALLLFAAVPTAV MSMEG_3635|M.smegmatis_MC2_155 KELPVTLLLHPTGTDTLATRLWGHSAVSDYAAAAPYAAALLVFAAIPTAV TH_0284|M.thermoresistible__bu -------------------------------------------------- Mb2420c|M.bovis_AF2122/97 -------------------------------------------------- Rv2398c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3716|M.marinum_M -------------------------------------------------- MUL_3659|M.ulcerans_Agy99 -------------------------------------------------- MAV_1784|M.avium_104 -------------------------------------------------- MAB_1654|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01087|M.leprae_Br4923 -------------------------------------------------- Mflv_3362|M.gilvum_PYR-GCK LGLWSTRSAEVRVD Mvan_3092|M.vanbaalenii_PYR-1 LGMWGTDDAGVRSD MSMEG_3635|M.smegmatis_MC2_155 LGAWTAGRTGVRSD TH_0284|M.thermoresistible__bu -------------- Mb2420c|M.bovis_AF2122/97 -------------- Rv2398c|M.tuberculosis_H37Rv -------------- MMAR_3716|M.marinum_M -------------- MUL_3659|M.ulcerans_Agy99 -------------- MAV_1784|M.avium_104 -------------- MAB_1654|M.abscessus_ATCC_1997 -------------- MLBr_01087|M.leprae_Br4923 --------------