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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0222 | hypC | - | 100% (85) | hydrogenase assembly chaperone HypC/HupF |
| M. thermoresistible (build 8) | TH_0226 | hypC | 5e-11 | 42.67% (75) | hydrogenase assembly chaperone HypC/HupF |
| M. thermoresistible (build 8) | TH_1947 | hypC | 2e-09 | 43.42% (76) | hydrogenase assembly chaperone HypC/HupF |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3980 | - | 5e-18 | 50.00% (88) | hydrogenase assembly chaperone hypC/hupF |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1858 | hypC | 3e-11 | 43.42% (76) | hydrogenase maturation factor, HypC |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2274 | hypC | 6e-23 | 57.69% (78) | hydrogenase assembly chaperone HypC/HupF |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2360 | - | 8e-18 | 54.29% (70) | hydrogenase assembly chaperone hypC/hupF |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2274|M.smegmatis_MC2_155 MCLGIPGKVVAVWDEA-GTRMSTVDFGGTTKTVCLAYLPD--MQIGEYTI
Mvan_2360|M.vanbaalenii_PYR-1 --------MIEIWEEA-GTRMSTVEFGGTTKTVCLAYLPD--MEVGEYTI
Mflv_3980|M.gilvum_PYR-GCK MCLAVPGRILSIHERD-GTTMSVVDFGGIRKNVCLQYLPD--AQVGQYVV
TH_0222|M.thermoresistible__bu MCLGIPGRIVEIWDEDSGARMARVAFPGEERTACLAYLPD--LQVGDYTI
MMAR_1858|M.marinum_M MCLGIPGRIVEITDPE--NYLAKVDVSGVQRTISVRLLDEDTPQPDDWVL
:: : : :: * . * :. .: * : : .::.:
MSMEG_2274|M.smegmatis_MC2_155 VHAGFAITRLDEASAQETLRMFKDLGVLDEELAEG-----VETA------
Mvan_2360|M.vanbaalenii_PYR-1 VHAGFAIARLDEASAHETLRMFADLGVLDEELAGEQPVGRRDPA------
Mflv_3980|M.gilvum_PYR-GCK VHVGFAIQRLDEESARRTLAEFAHLGVLDEEFADGFASAARQARLANPDT
TH_0222|M.thermoresistible__bu LHAGFALTRLDEDQAELTLATMAEYGVFGDGSAVTA--------------
MMAR_1858|M.marinum_M VHVGFAMAKIDESEALLTLAAIKQLGEAYTAEMEAFDSSSIV--------
:*.***: ::** .* ** : . *
MSMEG_2274|M.smegmatis_MC2_155 --------
Mvan_2360|M.vanbaalenii_PYR-1 --------
Mflv_3980|M.gilvum_PYR-GCK GARSESIP
TH_0222|M.thermoresistible__bu --------
MMAR_1858|M.marinum_M --------