For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
CLGIPGRIVEITDPENYLAKVDVSGVQRTISVRLLDEDTPQPDDWVLVHVGFAMAKIDESEALLTLAAIK QLGEAYTAEMEAFDSSSIV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1858 | hypC | - | 100% (90) | hydrogenase maturation factor, HypC |
| M. marinum M | MMAR_1863 | - | 5e-14 | 40.51% (79) | HupF/HypC family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3980 | - | 3e-09 | 37.33% (75) | hydrogenase assembly chaperone hypC/hupF |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2703 | hypC | 7e-27 | 62.37% (93) | hydrogenase assembly chaperone HypC/HupF |
| M. thermoresistible (build 8) | TH_0226 | hypC | 3e-36 | 81.11% (90) | hydrogenase assembly chaperone HypC/HupF |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2408 | - | 2e-11 | 40.00% (75) | hydrogenase assembly chaperone hypC/hupF |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1858|M.marinum_M MCLGIPGRIVEITD-PENYLAKVDVSGVQRTISVRLLDEDTPQ----PDD
TH_0226|M.thermoresistible__bu MCLGIPGRIVEITD-AENGLAKVDVSGVQRVISVRLLEQ-PPE----PDD
MSMEG_2703|M.smegmatis_MC2_155 MCLGIPGQVVDIVD-TEAHLAKVDVNGVRRVISVRLLATDNPEDILRVGD
Mvan_2408|M.vanbaalenii_PYR-1 MCLGIPGQVVGMLDGYGDQLALVDVAGEHRRVNVGMLPEERFA----PGD
Mflv_3980|M.gilvum_PYR-GCK MCLAVPGRILSIHERDGTTMSVVDFGGIRKNVCLQYLPDAQVG------Q
***.:**::: : : :: **. * :: : : * :
MMAR_1858|M.marinum_M WVLVHVGFAMAKIDESEALLTLAAIKQLGEAYTAEMEAFDSSSIV-----
TH_0226|M.thermoresistible__bu WVLVHVGFAMAKIDETEALLTLAAVQKLGEAYDSELEGLDSSSII-----
MSMEG_2703|M.smegmatis_MC2_155 WVLVHVGFAMAKIDEREAQLTLDQVQKMGADYTNEIDAFTSSEIA-----
Mvan_2408|M.vanbaalenii_PYR-1 WVIIHMGFVVEKTDKAGADAAWAGLELMGRG-PGDGDPP-----------
Mflv_3980|M.gilvum_PYR-GCK YVVVHVGFAIQRLDEESARRTLAEFAHLGVLDEEFADGFASAARQARLAN
:*::*:**.: : *: * : . :* :
MMAR_1858|M.marinum_M -----------
TH_0226|M.thermoresistible__bu -----------
MSMEG_2703|M.smegmatis_MC2_155 -----------
Mvan_2408|M.vanbaalenii_PYR-1 -----------
Mflv_3980|M.gilvum_PYR-GCK PDTGARSESIP