For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TETPQPAAPPPSAATTSPPPSPQQEKPPRLYRAAAWVVIVAGIVFTVAVIFFSGALVLGQGKCPYHRYYH HGMFRPVGPVAPGPGMGWVFGFPGGPPPPGMGPGFPGGPGGPAVGPTGPGPTTAPARP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3705A | - | - | 100% (129) | CONSERVED HYPOTHETICAL PROLINE RICH PROTEIN |
| M. tuberculosis H37Rv | Rv3706c | - | 8e-14 | 38.74% (111) | proline rich protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3732c | - | 3e-79 | 100.00% (129) | proline rich protein |
| M. gilvum PYR-GCK | Mflv_1307 | - | 2e-15 | 47.73% (132) | hypothetical protein Mflv_1307 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2580c | - | 2e-06 | 58.33% (48) | hypothetical protein MAB_2580c |
| M. marinum M | MMAR_5218 | - | 5e-40 | 53.79% (145) | hypothetical protein MMAR_5218 |
| M. avium 104 | MAV_0397 | - | 4e-30 | 44.57% (175) | hypothetical protein MAV_0397 |
| M. smegmatis MC2 155 | MSMEG_6254 | - | 4e-19 | 44.06% (143) | hypothetical protein MSMEG_6254 |
| M. thermoresistible (build 8) | TH_3578 | - | 7e-12 | 31.54% (130) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_4292 | - | 1e-30 | 54.70% (117) | hypothetical protein MUL_4292 |
| M. vanbaalenii PYR-1 | Mvan_5408 | - | 7e-19 | 42.41% (158) | hypothetical protein Mvan_5408 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3705A|M.tuberculosis_H37Rv MTETPQP------AAPPP----------------SAATTSPPPSPQQEKP
Mb3732c|M.bovis_AF2122/97 MTETPQP------AAPPP----------------SAATTSPPPSPQQEKP
MMAR_5218|M.marinum_M MSETSEP------ATPPP----------------AVATAAPPPPPPVEKV
MUL_4292|M.ulcerans_Agy99 ----------------------------------------------MEKV
MAV_0397|M.avium_104 MSQTPEPQAEPTTPEPTP----------------AAAVPPPPPPPERVKP
MAB_2580c|M.abscessus_ATCC_199 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 MTETPESR----TEPTAV----------------ATEQGRGELSPGSDRP
MSMEG_6254|M.smegmatis_MC2_155 MSETPSDHPTTPVGTPAETPTATSGPVAPPPVAPPPAAVPVAPAEAPRRH
TH_3578|M.thermoresistible__bu MTDAPEPRPTEPQAPPAQ-----------------PAAAPPAVSNAPR-S
Mflv_1307|M.gilvum_PYR-GCK MSDVTS-HQSDPATTPVP----------------APPSATAPPVVVPQES
Rv3705A|M.tuberculosis_H37Rv PRLYRAAAWVVIVAGIVFTVAVIFFSGALVLGQGKCPYHRY----YHHGM
Mb3732c|M.bovis_AF2122/97 PRLYRAAAWVVIVAGIVFTVAVIFFSGALVLGQGKCPYHRY----YHHGM
MMAR_5218|M.marinum_M PALYRVAAWVVIVAGITFIASTLFFAGALVFGHGACHHHRH----HHHGM
MUL_4292|M.ulcerans_Agy99 PALYRVAAWVVIVAGITFIASTLFFAGALVFGHGACHHHRH----HHHGM
MAV_0397|M.avium_104 PRLYTAAAWVVIVAGIVFIISSVFFVGAFIWKHS--YYHCH----HHHGV
MAB_2580c|M.abscessus_ATCC_199 MKMARALTYGAVAGGLTLG----------ILGFGASVASAE----PPPPI
Mvan_5408|M.vanbaalenii_PYR-1 NRLTQSAAWVGIVAGVVFIVAVIFFSGFFVGKQYGGGYRDGRGMSYPGGM
MSMEG_6254|M.smegmatis_MC2_155 SRVVQAAAWVGIVAGVVFIVAVVFGTGFVLGKNSG--PGHHHRGHDRPEI
TH_3578|M.thermoresistible__bu SRLPQVAAWIAIVAGVLVIMAVIFFAGFFLGRVSDGFGGHHHR-------
Mflv_1307|M.gilvum_PYR-GCK NRLNKAAAWVGIAAGAVFIVAVVFFAGFLLGQNVDGGGRAHHGGPG----
: :: :..* . :
Rv3705A|M.tuberculosis_H37Rv FRPV---GPV-----------APG----PG----MGWVFGFPGGPPP---
Mb3732c|M.bovis_AF2122/97 FRPV---GPV-----------APG----PG----MGWVFGFPGGPPP---
MMAR_5218|M.marinum_M FKPG---GSG-----------GPGG---PGGPGGPGGMFFLPGPPPPG--
MUL_4292|M.ulcerans_Agy99 FKPG---GSG-----------GPGG---PGGPGR---MFFLPGPPPPG--
MAV_0397|M.avium_104 FHPG---GPGPGNGPWQYGGPGPGNGPWPGGPGGSGAWYGGPGGPDNGPW
MAB_2580c|M.abscessus_ATCC_199 PVPG---LPG------------PGGP--PG-----------PGIPGPG--
Mvan_5408|M.vanbaalenii_PYR-1 MGPGGMMGPG--------GMMGPGGMMGPGGPG----GMMGPGGPGGMMG
MSMEG_6254|M.smegmatis_MC2_155 MMFHRGGPPP----------MMP---------------GMGPGHMRPG--
TH_3578|M.thermoresistible__bu MHWHDRMPSR----------YFD---------------HPGPGPR-----
Mflv_1307|M.gilvum_PYR-GCK MMQPGPAGFP----------MGPPGG-----------FHHGPGFAGPS--
**
Rv3705A|M.tuberculosis_H37Rv -------PGMGPGFPGGPGGPAVG----------PTGPGPTTAPARP---
Mb3732c|M.bovis_AF2122/97 -------PGMGPGFPGGPGGPAVG----------PTGPGPTTAPARP---
MMAR_5218|M.marinum_M -MGPGMGPGMGPGMSPGPHGGATGP------VQTPSAPAPSTPPARP---
MUL_4292|M.ulcerans_Agy99 -MGPGMGPGMGPGMSPGPHGGATGP------VQTPSAPAPSTPPARPYRR
MAV_0397|M.avium_104 PGGPGLIVPMPPGGPGGPGGPVSGPGVSGPGQPSPVSPAPSTPAPRP---
MAB_2580c|M.abscessus_ATCC_199 ------VPGPGPGIP-GPGVPG------------PDGPGPDGPFFH----
Mvan_5408|M.vanbaalenii_PYR-1 ------PGSWGPGGMMGPGSWGPGMMG------PGQQPSPTTTPAVPTTP
MSMEG_6254|M.smegmatis_MC2_155 ------GGMFGPGGAPAERGEFRG----------PQAPDRSETPT-TAPA
TH_3578|M.thermoresistible__bu ---------FSP-SAPGTR---------------PAPPTEPAAPSPTATP
Mflv_1307|M.gilvum_PYR-GCK ------GG--GP-GMDAPR---------------PQSPTTGNAPT--PSP
* . * .
Rv3705A|M.tuberculosis_H37Rv ---
Mb3732c|M.bovis_AF2122/97 ---
MMAR_5218|M.marinum_M ---
MUL_4292|M.ulcerans_Agy99 AAR
MAV_0397|M.avium_104 ---
MAB_2580c|M.abscessus_ATCC_199 ---
Mvan_5408|M.vanbaalenii_PYR-1 QR-
MSMEG_6254|M.smegmatis_MC2_155 RP-
TH_3578|M.thermoresistible__bu RP-
Mflv_1307|M.gilvum_PYR-GCK RP-