For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDVTSHQSDPATTPVPAPPSATAPPVVVPQESNRLNKAAAWVGIAAGAVFIVAVVFFAGFLLGQNVDGG GRAHHGGPGMMQPGPAGFPMGPPGGFHHGPGFAGPSGGGPGMDAPRPQSPTTGNAPTPSPRP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1307 | - | - | 100% (132) | hypothetical protein Mflv_1307 |
M. gilvum PYR-GCK | Mflv_3843 | - | 8e-06 | 31.88% (138) | hypothetical protein Mflv_3843 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3733c | - | 1e-16 | 41.94% (124) | proline rich protein |
M. tuberculosis H37Rv | Rv3706c | - | 1e-16 | 41.94% (124) | proline rich protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5218 | - | 6e-16 | 41.26% (143) | hypothetical protein MMAR_5218 |
M. avium 104 | MAV_0397 | - | 1e-16 | 35.84% (173) | hypothetical protein MAV_0397 |
M. smegmatis MC2 155 | MSMEG_6254 | - | 2e-18 | 41.73% (139) | hypothetical protein MSMEG_6254 |
M. thermoresistible (build 8) | TH_3578 | - | 1e-13 | 38.98% (118) | PUTATIVE - |
M. ulcerans Agy99 | MUL_4293 | - | 3e-13 | 41.73% (127) | hypothetical protein MUL_4293 |
M. vanbaalenii PYR-1 | Mvan_5494 | - | 1e-30 | 52.94% (136) | hypothetical protein Mvan_5494 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1307|M.gilvum_PYR-GCK ----MSDVTS--HQSDPATTPVPAP---------------PSATAPP-VV Mvan_5494|M.vanbaalenii_PYR-1 MISAMSEATPPREESEPVTAPVGTP---------------PPPVPPQTVY MMAR_5218|M.marinum_M ----MSET------SEPATPPPAVA---------------TAAPPPPPPV MAV_0397|M.avium_104 ----MSQTPE--PQAEPTTPEPTPA---------------AAVPPPPPPP Mb3733c|M.bovis_AF2122/97 ----MRHM------SETSETPT--------------------PPP----- Rv3706c|M.tuberculosis_H37Rv ----MRHM------SETSETPT--------------------PPP----- MUL_4293|M.ulcerans_Agy99 ----MSET------SETSAAPTSTV---------------VAPPPPP--- MSMEG_6254|M.smegmatis_MC2_155 ----MSETPSD-HPTTPVGTPAETPTATSGPVAPPPVAPPPAAVPVAPAE TH_3578|M.thermoresistible__bu ----MTDAPEP-RPTEPQAPPAQ-----------------PAAAPPAVSN * . : . . . Mflv_1307|M.gilvum_PYR-GCK VPQESNRLNKAAAWVGIAAGAVFIVAVVFFAGFLLGQN--VDGGGRAHHG Mvan_5494|M.vanbaalenii_PYR-1 VQQPSGRLNKAALWVGIVAGSVFIVAAIFGAGVFVGKN--IGDGPRNHHI MMAR_5218|M.marinum_M EKV--PALYRVAAWVVIVAGITFIASTLFFAGALVFGHG-ACHHHRHHHH MAV_0397|M.avium_104 ERVKPPRLYTAAAWVVIVAGIVFIISSVFFVGAFIWKH---SYYHCHHHH Mb3733c|M.bovis_AF2122/97 --HQTPKVFKAAAWVAIAAGTVFIVAVIFFTGYILGKHAGHGGFHHRQHH Rv3706c|M.tuberculosis_H37Rv --HQTPKVFKAAAWVAIAAGTVFIVAVIFFTGYILGKHAGHGGFHHRQHH MUL_4293|M.ulcerans_Agy99 -QHLTPKVFKAAAWVAIVAGIVFIVSVIFFTGFRLGMHSGHGGFHRGHHH MSMEG_6254|M.smegmatis_MC2_155 APRRHSRVVQAAAWVGIVAGVVFIVAVVFGTGFVLGKN--SG--PGHHHR TH_3578|M.thermoresistible__bu APR-SSRLPQVAAWIAIVAGVLVIMAVIFFAGFFLGRV--SDGFGGHHHR : .* *: *.** .* : :* .* : :* Mflv_1307|M.gilvum_PYR-GCK GP-----GMMQPGPAG-----------------FPMGP--PGGFHHGPG- Mvan_5494|M.vanbaalenii_PYR-1 G-------VMHHGPMM-----------------SPMGP--QGGFQRGPG- MMAR_5218|M.marinum_M G-------MFKPGGSG-----------GPGG---PGGPGGPGGMFFLPGP MAV_0397|M.avium_104 G-------VFHPGGPGPGNGPWQYGGPGPGNGPWPGGPGGSGAWYGGPGG Mb3733c|M.bovis_AF2122/97 ---------QHPAMMLR-----------------PGSP-HGGPAAVRPG- Rv3706c|M.tuberculosis_H37Rv ---------QHPAMMLR-----------------PGSP-HGGPAAVRPG- MUL_4293|M.ulcerans_Agy99 K--------HHPAMMLR-----------------PGMH-HGGAPAVSPG- MSMEG_6254|M.smegmatis_MC2_155 GHDRPEIMMFHRGGPPP------------MMPGMGPGHMRPGGGMFGPG- TH_3578|M.thermoresistible__bu -------MHWHDRMPSR------------YFDHPGPGPR------FSP-- : * Mflv_1307|M.gilvum_PYR-GCK --------------------FAGPSG--GGPGMDAPRPQSPTTGNAPTPS Mvan_5494|M.vanbaalenii_PYR-1 --------------------SAGPFGP-GGPVMESPR--QPAGPAAPTAP MMAR_5218|M.marinum_M PPPG---MGPGMGPGMGPGMSPGPHG-----GATGPVQ-TPSAPAPSTPP MAV_0397|M.avium_104 PDNGPWPGGPGLIVPMPPGGPGGPGGPVSGPGVSGPGQPSPVSPAPSTPA Mb3733c|M.bovis_AF2122/97 ---------------------PGPGG---------PGQ-VPSSVSPPATP Rv3706c|M.tuberculosis_H37Rv ---------------------PGPGG---------PGQ-VPSSVSPPATP MUL_4293|M.ulcerans_Agy99 ---------------------SGPGG---------PGE-VPTSVAPSTTP MSMEG_6254|M.smegmatis_MC2_155 ---------------------GAPAERG---EFRGPQAPDRSETPT-TAP TH_3578|M.thermoresistible__bu ---------------------SAPGTR--------PAPPTEPAAPSPTAT .* * . :.. Mflv_1307|M.gilvum_PYR-GCK PRP Mvan_5494|M.vanbaalenii_PYR-1 PRP MMAR_5218|M.marinum_M ARP MAV_0397|M.avium_104 PRP Mb3733c|M.bovis_AF2122/97 AP- Rv3706c|M.tuberculosis_H37Rv AP- MUL_4293|M.ulcerans_Agy99 GR- MSMEG_6254|M.smegmatis_MC2_155 ARP TH_3578|M.thermoresistible__bu PRP