For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSQTPEPQAEPTTPEPTPAAAVPPPPPPPERVKPPRLYTAAAWVVIVAGIVFIISSVFFVGAFIWKHSYY HCHHHHGVFHPGGPGPGNGPWQYGGPGPGNGPWPGGPGGSGAWYGGPGGPDNGPWPGGPGLIVPMPPGGP GGPGGPVSGPGVSGPGQPSPVSPAPSTPAPRP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0397 | - | - | 100% (172) | hypothetical protein MAV_0397 |
| M. avium 104 | MAV_0396 | - | 3e-19 | 35.76% (165) | hypothetical protein MAV_0396 |
| M. avium 104 | MAV_2780 | - | 8e-13 | 54.93% (71) | hypothetical protein MAV_2780 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3732c | - | 6e-30 | 44.57% (175) | proline rich protein |
| M. gilvum PYR-GCK | Mflv_1307 | - | 2e-16 | 35.84% (173) | hypothetical protein Mflv_1307 |
| M. tuberculosis H37Rv | Rv3706c | - | 6e-13 | 37.50% (104) | proline rich protein |
| M. leprae Br4923 | MLBr_01556 | infB | 5e-05 | 35.71% (70) | translation initiation factor IF-2 |
| M. abscessus ATCC 19977 | MAB_3220 | - | 2e-10 | 50.00% (64) | hypothetical protein MAB_3220 |
| M. marinum M | MMAR_5218 | - | 3e-37 | 49.14% (175) | hypothetical protein MMAR_5218 |
| M. smegmatis MC2 155 | MSMEG_6254 | - | 4e-16 | 40.76% (157) | hypothetical protein MSMEG_6254 |
| M. thermoresistible (build 8) | TH_3578 | - | 4e-12 | 35.45% (110) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_4292 | - | 3e-27 | 46.15% (143) | hypothetical protein MUL_4292 |
| M. vanbaalenii PYR-1 | Mvan_5408 | - | 6e-23 | 42.44% (172) | hypothetical protein Mvan_5408 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 MAGKARVHELAKELGVTSKEVLARLNEQGEFVKSASSTVEAPVARRLRES
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M ---MSET----SEPATPPPAV----------------ATAAPPPPPPVEK
MUL_4292|M.ulcerans_Agy99 -----------------------------------------------MEK
MAV_0397|M.avium_104 ---MSQTPEPQAEPTTPEPTP----------------AAAVPPPPPPPER
Mb3732c|M.bovis_AF2122/97 ---MTETP----QPAAPPPSA----------------ATTSPPPSPQQEK
Mvan_5408|M.vanbaalenii_PYR-1 ---MTETPESRTEPTAVATEQ----------------GRGE--LSPGSDR
MSMEG_6254|M.smegmatis_MC2_155 ---MSETPSDHPTTPVGTPAETPTATSGPVAPPPVAPPPAAVPVAPAEAP
TH_3578|M.thermoresistible__bu ---MTDAPEPRPTEPQAPPAQ-----------------PAAAPPAVSNAP
Rv3706c|M.tuberculosis_H37Rv ---MRHMSETS-ETPTPPPHQ-----------------------------
Mflv_1307|M.gilvum_PYR-GCK ---MSDVTSHQ-SDPATTPVP----------------APPSATAPPVVVP
MLBr_01556|M.leprae_Br4923 FGGIKPAADKGAEQVATKAQAKRLG---ESLDQTLDRALDKAVAGNGATT
MAB_3220|M.abscessus_ATCC_1997 ---MQDSRQRKKQDQRSPTHL----------------------TREHPMK
MMAR_5218|M.marinum_M V--PALYRVAAWVVIVAG----ITFIASTLFFAG-------ALVFGHGA-
MUL_4292|M.ulcerans_Agy99 V--PALYRVAAWVVIVAG----ITFIASTLFFAG-------ALVFGHGA-
MAV_0397|M.avium_104 VKPPRLYTAAAWVVIVAG----IVFIISSVFFVG-------AFIWKH---
Mb3732c|M.bovis_AF2122/97 P--PRLYRAAAWVVIVAG----IVFTVAVIFFSG-------ALVLGQGK-
Mvan_5408|M.vanbaalenii_PYR-1 P--NRLTQSAAWVGIVAG----VVFIVAVIFFSG-------FFVGKQYG-
MSMEG_6254|M.smegmatis_MC2_155 RRHSRVVQAAAWVGIVAG----VVFIVAVVFGTG-------FVLGKNSG-
TH_3578|M.thermoresistible__bu R-SSRLPQVAAWIAIVAG----VLVIMAVIFFAG-------FFLGRVSDG
Rv3706c|M.tuberculosis_H37Rv --TPKVFKAAAWVAIAAG----TVFIVAVIFFTG-------YILGKHAG-
Mflv_1307|M.gilvum_PYR-GCK QESNRLNKAAAWVGIAAG----AVFIVAVVFFAG-------FLLGQNVDG
MLBr_01556|M.leprae_Br4923 AAPVQVDHSAAVVPIVAGEGPSTAHREELAPPAGQPSEQPGVPLPGQQGT
MAB_3220|M.abscessus_ATCC_1997 TRTVKPAKVFAGCAIALG---AALAGCGTNNDGGPTSTSTTTTTTTTTTT
* *. * *
MMAR_5218|M.marinum_M --CHHHR----------------------------HHHHGMFKPG---GS
MUL_4292|M.ulcerans_Agy99 --CHHHR----------------------------HHHHGMFKPG---GS
MAV_0397|M.avium_104 --SYYHC----------------------------HHHHGVFHPG---GP
Mb3732c|M.bovis_AF2122/97 --CPYHR----------------------------YYHHGMFRPV---GP
Mvan_5408|M.vanbaalenii_PYR-1 --GGYRDGR------------------------GMSYPGGMMGPGGMMGP
MSMEG_6254|M.smegmatis_MC2_155 -PGHHHRGH------------------------DRPEIMMFHRGG-----
TH_3578|M.thermoresistible__bu FGGHHHR-------------------------------MHWHDRM-----
Rv3706c|M.tuberculosis_H37Rv HGGFHHR---------------------------------QHHQH-----
Mflv_1307|M.gilvum_PYR-GCK GGRAHHGG------------------------------PGMMQPG-----
MLBr_01556|M.leprae_Br4923 PAAPHPGHPGMPTGPHPGPAPKPGGRPPRVGNNPFSSAQSVARPIPRPPA
MAB_3220|M.abscessus_ATCC_1997 TITPAPSG----------------------------APEGTPAPG-----
MMAR_5218|M.marinum_M G-----------GPGG---PGGPGGPGGMFFLPGPPPPG-----------
MUL_4292|M.ulcerans_Agy99 G-----------GPGG---PGGPGR---MFFLPGPPPPG-----------
MAV_0397|M.avium_104 GPGNGPWQYGGPGPGNGPWPGGPGGSGAWYGGPGGPDNGPWP--------
Mb3732c|M.bovis_AF2122/97 V-----------APGP--------GMGWVFGFPGGPPPP-----------
Mvan_5408|M.vanbaalenii_PYR-1 G--------GMMGPGG---MMGPGGPGGMMG-PGGPGGM-----------
MSMEG_6254|M.smegmatis_MC2_155 -------------PPP----------MMPGMGPGHMRPGG----------
TH_3578|M.thermoresistible__bu -------------PSR----------YFDHPGPGPR--------------
Rv3706c|M.tuberculosis_H37Rv -------------PAM----------MLR---PG----------------
Mflv_1307|M.gilvum_PYR-GCK -------------PAG----------FPMGP-PGGFHHG-----------
MLBr_01556|M.leprae_Br4923 PRPSASPSSMSPRPGGAVGGGGPRPPRTGVPRPGGGRPGAPVGGRSDAGG
MAB_3220|M.abscessus_ATCC_1997 -------------PTG-----GGGPDGGSGAIPGGPTGGG----------
* **
MMAR_5218|M.marinum_M -----MGPGMGPGMGPGMSPGPHG-----GATGPVQ-TPSAPAPSTPPAR
MUL_4292|M.ulcerans_Agy99 -----MGPGMGPGMGPGMSPGPHG-----GATGPVQ-TPSAPAPSTPPAR
MAV_0397|M.avium_104 -----GGPGLIVPMPPGGPGGPGGPVSGPGVSGPGQPSPVSPAPSTPAPR
Mb3732c|M.bovis_AF2122/97 ------------GMGPGFPGGPGG-----PAVGPTG-----PGPTTAPAR
Mvan_5408|M.vanbaalenii_PYR-1 -----MGPG---SWGPGGMMGPGS--WGPGMMGPGQ----QPSPTTTPAV
MSMEG_6254|M.smegmatis_MC2_155 -----------GMFGPGGAPAERG--EFRGPQAPD---RSETPT-TAPAR
TH_3578|M.thermoresistible__bu -------------FSP-SAPGTR-------PAPPT---EPAAPSPTATPR
Rv3706c|M.tuberculosis_H37Rv --------------SPHGGPAAVR--PGPGPGGPGQ--VPSSVSPPATPA
Mflv_1307|M.gilvum_PYR-GCK --------------PGFAGPSGGG--PGMDAPRPQS--PTTGNAPTPSPR
MLBr_01556|M.leprae_Br4923 GNYRGGGVGALPGGGSGGFRGRPGGGGHGGGGRPGQRGGAAGAFGRPGGA
MAB_3220|M.abscessus_ATCC_1997 ------GPEGGSGSIPGGPTGGGGP-EGGGGHIPGVGGGHGGPGGGGGCV
. *
MMAR_5218|M.marinum_M P-------------------------------------------------
MUL_4292|M.ulcerans_Agy99 PYRRAAR-------------------------------------------
MAV_0397|M.avium_104 P-------------------------------------------------
Mb3732c|M.bovis_AF2122/97 P-------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 PTTPQR--------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 P-------------------------------------------------
TH_3578|M.thermoresistible__bu P-------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv P-------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK P-------------------------------------------------
MLBr_01556|M.leprae_Br4923 PRRGRKSKRQKRQEYDSMQAPVVGGVRLPHGNGETIRLARGASLSDFAEK
MAB_3220|M.abscessus_ATCC_1997 DNVGCVSIP-----------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 IDANPAALVQALFNLGEMVTATQSVGDETLELLGSEMNYNVQVVSPEDED
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 RELLEPFDLTYGEDQGDEDELQVRPPVVTVMGHVDHGKTRLLDTIRKANV
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 REAEAGGITQHIGAYQVGVDLDGSERLITFIDTPGHEAFTAMRARGAKAT
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 DIAILVVAADDGVMPQTVEAINHAQAADVPIVVAVNKIDKEGADPAKIRG
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 QLTEYGLVAEDFGGDTMFIDISAKVGTNIEALLEAVLLTADAALDLRANS
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 GMEAQGVAIEAHLDRGRGPVATVLVQRGTLRIGDSVVAGDAYGRVRRMVD
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 EHGVDIEAALPSSPVQVIGFTSVPGAGDNFLVVDEDRIARQIADRRSARK
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 RNALAARSRKRISLEDLDSALKETSQLNLILKGDNAGTVEALEEALMGIQ
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 VDDEVALRVIDRGVGGITETNVNLASASDAIIIGFNVRAEGKATELASRE
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 GVEIRYYLVIYQAIDDIEKALRGMLKPIYEENQLGRAEIRALFRSSKVGI
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M --------------------------------------------------
MUL_4292|M.ulcerans_Agy99 --------------------------------------------------
MAV_0397|M.avium_104 --------------------------------------------------
Mb3732c|M.bovis_AF2122/97 --------------------------------------------------
Mvan_5408|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6254|M.smegmatis_MC2_155 --------------------------------------------------
TH_3578|M.thermoresistible__bu --------------------------------------------------
Rv3706c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_1307|M.gilvum_PYR-GCK --------------------------------------------------
MLBr_01556|M.leprae_Br4923 IAGCIISSGVVRRNAKVRLLRDNIVVTDNLTVTSLRREKDDVTEVREGFE
MAB_3220|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_5218|M.marinum_M ---------------------------
MUL_4292|M.ulcerans_Agy99 ---------------------------
MAV_0397|M.avium_104 ---------------------------
Mb3732c|M.bovis_AF2122/97 ---------------------------
Mvan_5408|M.vanbaalenii_PYR-1 ---------------------------
MSMEG_6254|M.smegmatis_MC2_155 ---------------------------
TH_3578|M.thermoresistible__bu ---------------------------
Rv3706c|M.tuberculosis_H37Rv ---------------------------
Mflv_1307|M.gilvum_PYR-GCK ---------------------------
MLBr_01556|M.leprae_Br4923 CGMTLGYSDIKEGDVIESYELVEKQRA
MAB_3220|M.abscessus_ATCC_1997 ---------------------------