For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHALINQLDAQASEEEL GGTLCCALANRLRITKPDAARRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHVKVIRALFRP PARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTA KWLPDPPSAGHL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3466 | - | - | 100% (222) | hypothetical protein Rv3466 |
M. tuberculosis H37Rv | Rv1588c | - | e-125 | 97.75% (222) | REP13E12 repeat-containing protein |
M. tuberculosis H37Rv | Rv0095c | - | 2e-40 | 83.33% (96) | hypothetical protein Rv0095c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3495 | - | 1e-126 | 98.20% (222) | hypothetical protein Mb3495 |
M. gilvum PYR-GCK | Mflv_4397 | - | 5e-20 | 44.26% (122) | hypothetical protein Mflv_4397 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0394c | - | 1e-21 | 48.70% (115) | hypothetical protein MAB_0394c |
M. marinum M | MMAR_3121 | - | 3e-43 | 61.59% (138) | hypothetical protein MMAR_3121 |
M. avium 104 | MAV_2352 | - | 3e-35 | 59.42% (138) | hypothetical protein MAV_2352 |
M. smegmatis MC2 155 | MSMEG_6573 | - | 1e-13 | 38.40% (125) | hypothetical protein MSMEG_6573 |
M. thermoresistible (build 8) | TH_3287 | - | 2e-12 | 35.38% (130) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2371 | - | 5e-43 | 60.87% (138) | hypothetical protein MUL_2371 |
M. vanbaalenii PYR-1 | Mvan_3050 | - | 2e-22 | 42.65% (136) | hypothetical protein Mvan_3050 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_0394c|M.abscessus_ATCC_199 -----------MSPIDDLLTTATAVVESS----FDELNNPELLSALRQLE TH_3287|M.thermoresistible__bu MGQQFVTAGAARARVGELLAAVDAAYAEMRALCLDEVGTGFRLELAERLE Mflv_4397|M.gilvum_PYR-GCK ---------MSGGDLQTSIAALRAAFEEVAAADVDLLTRPDLVAALDELE MSMEG_6573|M.smegmatis_MC2_155 ---------MDDG-VQDAVAALDAALNTLLTLPHSALTDAELLTICAGLQ Mvan_3050|M.vanbaalenii_PYR-1 -------MGCSREDVLGAFDALDAVVESILALDYDALSAAERVRLEARLE MMAR_3121|M.marinum_M ---MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLE MUL_2371|M.ulcerans_Agy99 ---MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLE MAV_2352|M.avium_104 ---MHS---STREEIRADVDALRAAVSRVLGHSYDALTTPERLRLLEIFD Rv3466|M.tuberculosis_H37Rv ------MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLE Mb3495|M.bovis_AF2122/97 ------MGSGSRERIVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLE : . . : : :: MAB_0394c|M.abscessus_ATCC_199 IAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTATARRRL TH_3287|M.thermoresistible__bu TQCRINRGLMYRVFAQLADPPDEPAMVPAVRDRLWAR-LRITPGEVKRRL Mflv_4397|M.gilvum_PYR-GCK ELSCQLPAVGHRLLARLQVETSAREMGAKSWNQVLAVRWRISTGEAHRRL MSMEG_6573|M.smegmatis_MC2_155 DARNRIPAVEHRAIAALSQQTTPAAIGAKSWPLVLATRLGISSKEARRRC Mvan_3050|M.vanbaalenii_PYR-1 RNLRRIPTVEHELLASVIAETEPARLGEGSWKKVLTTALRISGAEAGRRL MMAR_3121|M.marinum_M VVARRLPVAQYALLNQLDEQAGEAELGGR-LAAVVASRLRITRSEAGRRV MUL_2371|M.ulcerans_Agy99 VVARRLPAAQYALVNQLDEQPGEAELGGR-LAAVVASRLRITRSEAGRRV MAV_2352|M.avium_104 RETRRLRVPGHQLINQLAEQSDPTELGGR-LSFALAERLHITRSDASRRI Rv3466|M.tuberculosis_H37Rv CLVRRLPAVGHALINQLDAQASEEELGGT-LCCALANRLRITKPDAARRI Mb3495|M.bovis_AF2122/97 CLVRRLPAVGHTLINQLDTQASEEELGGT-LCCALANRLRITKPDAALRI : : : : *: . * MAB_0394c|M.abscessus_ATCC_199 ADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPD TH_3287|M.thermoresistible__bu RVAALLRPRRRLSGPPLPPVLARVAGAVESGLLGEEHLRVITTVMAALPS Mflv_4397|M.gilvum_PYR-GCK TEAALLAPRQSLTGTPLPPALPATAVAQSRGLINAEHVEVIRKAVKKLPG MSMEG_6573|M.smegmatis_MC2_155 TDAAELGPRVSMTGEALAPKREHIAAAQADGTLTPDHVAELFKFFTKCPD Mvan_3050|M.vanbaalenii_PYR-1 KRAKTLGPRRGLTGTPLPPLWESTAAAQAQGLLSEEHVAVIAAFHKRLPA MMAR_3121|M.marinum_M AEAADVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRRLPA MUL_2371|M.ulcerans_Agy99 AEAAEVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRQLPA MAV_2352|M.avium_104 AEAADLGPRRALTGEPLPPLLPATAAAQRDGAIGTDHVAVIRQFFDQLPE Rv3466|M.tuberculosis_H37Rv ADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHVKVIRALFR---- Mb3495|M.bovis_AF2122/97 ADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFR---- * : ** ::* .: * * * * : *: : MAB_0394c|M.abscessus_ATCC_199 AVDADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPDG-RFSDIDRA TH_3287|M.thermoresistible__bu AVSVTDREAVEASLIAEAARSDAGIVRQVGRRIEEIFNPDG-HYDDQDRA Mflv_4397|M.gilvum_PYR-GCK WVDVATREQFEVNLVRTAVGNGPKELRDAAELTLFLLDQDGPEPDDTERA MSMEG_6573|M.smegmatis_MC2_155 WVTYAEQCRLEEKLVTGAIGADPETVRQAVDHAVFLLDQDGPAPTDNPPT Mvan_3050|M.vanbaalenii_PYR-1 WVDIETRAEADRQLAHAGSGLDPEGLDEAAGVLLAMINPDGAQPCDKERA MMAR_3121|M.marinum_M GVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDG-RHSDEDRA MUL_2371|M.ulcerans_Agy99 GVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDG-RHSDEDRA MAV_2352|M.avium_104 AVDVETCEHAERQLAAQATQFRPDQLSKLARRLMDCLNPDG-RYSDEDRA Rv3466|M.tuberculosis_H37Rv ----------------------------PPARRGGCVHPPG------RRS Mb3495|M.bovis_AF2122/97 ----------------------------PPARRGGCVHPPG------RRS .. * : MAB_0394c|M.abscessus_ATCC_199 RRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRD--- TH_3287|M.thermoresistible__bu RRRGIHLGDQQRDGMSAISGWIDPQLRAYLEAVTAAVR-PGRHLPHTTTD Mflv_4397|M.gilvum_PYR-GCK RKRGLTKGKQRPDGMIDLAGTLTPEAWAVLEVIFAKYAAPGMCNPAD--- MSMEG_6573|M.smegmatis_MC2_155 KPFGITFGPQQPDGSYHLRGKVSAEFKATFDPIDEKLAAPGMCNPTD--- Mvan_3050|M.vanbaalenii_PYR-1 RKRGIRISKQHPDGTATISGTLTPEALAIWQAIFAKEAAPGANNPESEH- MMAR_3121|M.marinum_M RRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPED--- MUL_2371|M.ulcerans_Agy99 RRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPED--- MAV_2352|M.avium_104 RARGLVLGNQQADGMSRLSGWLTPEARAGWEAVLAKLAAPGMCNPDD--- Rv3466|M.tuberculosis_H37Rv RP-----GRQS--------------------------------------- Mb3495|M.bovis_AF2122/97 RP-----GRQS--------------------------------------- : . * MAB_0394c|M.abscessus_ATCC_199 --------ESPMTEG------------------------------EPDSA TH_3287|M.thermoresistible__bu TTGTTGTTETTGTAG------------------------------TAGTA Mflv_4397|M.gilvum_PYR-GCK --------PEPCTYG------------------------------TPTQA MSMEG_6573|M.smegmatis_MC2_155 --------QTPCISG------------------------------TPSQQ Mvan_3050|M.vanbaalenii_PYR-1 --------TEDSTSGGAADDASDAPGDHAGAASSAASGASDAAEHDPQPE MMAR_3121|M.marinum_M --------EAAVVDG------------------------------PVSPD MUL_2371|M.ulcerans_Agy99 --------EAAVVDG------------------------------PVSRD MAV_2352|M.avium_104 --------DAPVVDG------------------------------PPPEA Rv3466|M.tuberculosis_H37Rv -------------------------------------------------- Mb3495|M.bovis_AF2122/97 -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 AAERDT---------------RTSAQRNHDGLRACLRSTLASGKLGAHRG TH_3287|M.thermoresistible__bu ATAADTAADGVGDIDTGGVDLRSAAQRRHDGLTLGLKIAVASGRLGSHRG Mflv_4397|M.gilvum_PYR-GCK QIDNDQ---------------RSLAQRQHDALVAVGRIALMSGELGQLNG MSMEG_6573|M.smegmatis_MC2_155 QIDSDQ---------------RGAPERRHDAMLTAMRLLLAHKDLGQING Mvan_3050|M.vanbaalenii_PYR-1 RCGSDT---------------RTQAQRNHDAFLAVGRRLLESGELGTHNG MMAR_3121|M.marinum_M AADRDS---------------RSVGQRQHDGFNAALRAVLASGELGQHNG MUL_2371|M.ulcerans_Agy99 AADRDS---------------RSVSQRQHDGFNAALRAVLASGELGQHNG MAV_2352|M.avium_104 ASQRDS---------------RSAAQRNHDGLNAALRALLAGGKLGQHNG Rv3466|M.tuberculosis_H37Rv ---------------------RSISSRRAG-------------------- Mb3495|M.bovis_AF2122/97 ---------------------RSISSRRAG-------------------- * .*. . MAB_0394c|M.abscessus_ATCC_199 LPVTVVVSTTLRELQSAA-----------GRAISGSGNLVPIPDLIRMAT TH_3287|M.thermoresistible__bu HPVTVIVRTTLGELNQAAHAVADPRVSMPGPARTGGTGVLPMRELIRMAA Mflv_4397|M.gilvum_PYR-GCK LPVSIIIRTTLQDLESRA-----------GVGTTGGGTVVPIKDVIRMAG MSMEG_6573|M.smegmatis_MC2_155 LPATLLVTTTLQELEKAA-----------GVAITAGGTKLSIPDLIRLAS Mvan_3050|M.vanbaalenii_PYR-1 LPVTVIVSTTLQELEKGA-----------GVAVTGGGSLLPMPDLIRLAA MMAR_3121|M.marinum_M LPASIIVSTTLKELEAAA-----------GRGLTGGGTLLPMSDVIRLAR MUL_2371|M.ulcerans_Agy99 LPASIIVSTTLKELEAAA-----------GRGLTGGGTLLPMSDVIRLAR MAV_2352|M.avium_104 LPASIIVTTTLRDLESAA-----------GKGLTGGGTLLPMSEVIRLAR Rv3466|M.tuberculosis_H37Rv --------------------------------------------PLRPAG Mb3495|M.bovis_AF2122/97 --------------------------------------------PLRPAG :* * MAB_0394c|M.abscessus_ATCC_199 HAFHYLTIFGDD-GRPLHLGRSKRIATPDQRIVLHAKDRGCSAPGCTVPG TH_3287|M.thermoresistible__bu DAIHYLAVFDDHTERPLYLGRQKRIATADQRLICYARDGGCTAPGCGEPG Mflv_4397|M.gilvum_PYR-GCK HANHYLAVFDRATGSALDLFRTRRVASPAQRVMLIARDGGCTKPCCTVGA MSMEG_6573|M.smegmatis_MC2_155 QALHYLAVYDEHTGIPLYLGRARRTASAGQRLAIWARDRGCTRPGCTANG Mvan_3050|M.vanbaalenii_PYR-1 RAHHYLYVYDQHSGKSLYLGRAKRLANAAQRIVLHARDRGCTRPGCTAPG MMAR_3121|M.marinum_M HAHHYLAVFDRG--EAIGLYHAKRLATPGQRIVLYAKDRGCTRPGCDVAG MUL_2371|M.ulcerans_Agy99 HAHHYLAVFDRG--EAIGLYHAKRLATPGQRIVLYAKDRGCTRPGCDVAG MAV_2352|M.avium_104 HAHHYLAVFDNG--KPLALYHTKRLASPGQRIVLYAKDRGCSHPGCDVSG Rv3466|M.tuberculosis_H37Rv HG----------------------LATPRRRPHRHR-----TRPQTR--- Mb3495|M.bovis_AF2122/97 HG----------------------LATPRRRPHRHR-----TRPQTR--- . *.. :* : * MAB_0394c|M.abscessus_ATCC_199 YLCQVHHVD-DWRDDGPTDIDNLTFACGPHHRLLQQGW--TTRKRRSDGI TH_3287|M.thermoresistible__bu YHAETHHQP-AWEDGGLTDADHLFFACGPHHSGLTEGR--WQATITPTGR Mflv_4397|M.gilvum_PYR-GCK YGCQVHHAETDYAHGGNTNIDELGLACGPDNRSVTEGG--WTTRINDRCE MSMEG_6573|M.smegmatis_MC2_155 YRCQAHHATTDYAKGGLTDADALALACGCDNRLVGEAPNKWTTRINNHGQ Mvan_3050|M.vanbaalenii_PYR-1 YWCQAHHASADFVDGGLTNIDDLTLACPCDHRMLDNTG--WRTRKNGKNQ MMAR_3121|M.marinum_M YQCEVHHVA-AWAISGRTDINQLTLACGPDHK-LLEQG--WRTRKNAHGD MUL_2371|M.ulcerans_Agy99 YQCEVHHVA-AWAISGRTDINQLTLACGPDHK-LLEQG--WRTRKNAHGD MAV_2352|M.avium_104 YYCEVHHVT-GYAKCGRTDIDQLTFACGGHHP-LAEQG--WITRKNGRGE Rv3466|M.tuberculosis_H37Rv -----HHPE--------------------------------QPAIRRHVT Mb3495|M.bovis_AF2122/97 -----HHPE--------------------------------QPAIRRHVT ** MAB_0394c|M.abscessus_ATCC_199 TEWIPPPHLDTGQSRTNDHHHPERFIRRF--------------------- TH_3287|M.thermoresistible__bu LAWTNDHHPPT----VNHAHHPEELLRAHT-------------------- Mflv_4397|M.gilvum_PYR-GCK VEWIPPPGLDTGQARVNTYHRPERLLAPP--------------------- MSMEG_6573|M.smegmatis_MC2_155 CEWIPPDLLDRGQHRTNTYHHPETLLADINRDQKTDGDNREQHHTDTGAD Mvan_3050|M.vanbaalenii_PYR-1 TEWLPPPDLDTGQHRVNGHHHPERYLLPE--------------------- MMAR_3121|M.marinum_M TEWLPPPHLDHGQPRTNTYHHPEKLLRDS--------------------- MUL_2371|M.ulcerans_Agy99 TEWLPPPHLDHGQPRTNSYHHPEKLLRDS--------------------- MAV_2352|M.avium_104 TEWIPPPHLERGQPRVNSFHHPEDMLCDT--------------------- Rv3466|M.tuberculosis_H37Rv AKWLPDP--------PSAGHL----------------------------- Mb3495|M.bovis_AF2122/97 AKWLPDP--------PSAGHL----------------------------- * . * MAB_0394c|M.abscessus_ATCC_199 -------------------------------------------------- TH_3287|M.thermoresistible__bu ----------------------------------DPPEDPG--------- Mflv_4397|M.gilvum_PYR-GCK ----------DDPEPP------NQTRTTATEPVEDQAIDDPETDAPPPLD MSMEG_6573|M.smegmatis_MC2_155 TGTVHVNGHGEKPAIPPELLDQGQQRTAPYHQAEVPPVNTRDTRSSTTTR Mvan_3050|M.vanbaalenii_PYR-1 ---------------------------------DDLPEDDQGP------- MMAR_3121|M.marinum_M -------------------------------------ADDDD-------- MUL_2371|M.ulcerans_Agy99 -------------------------------------ADDDD-------- MAV_2352|M.avium_104 -------------------------------------EDQQDQQDQQDQA Rv3466|M.tuberculosis_H37Rv -------------------------------------------------- Mb3495|M.bovis_AF2122/97 -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 -------------------------------- TH_3287|M.thermoresistible__bu -------------------------------- Mflv_4397|M.gilvum_PYR-GCK DPGEPGGP----------APPDNRAA------ MSMEG_6573|M.smegmatis_MC2_155 DANRHNGNGDRNSAENRNGPSKNAAGDDDEPR Mvan_3050|M.vanbaalenii_PYR-1 -------------------------------- MMAR_3121|M.marinum_M -EGHGAA------------------------- MUL_2371|M.ulcerans_Agy99 -EGHGAA------------------------- MAV_2352|M.avium_104 DEEDGAA------------------------- Rv3466|M.tuberculosis_H37Rv -------------------------------- Mb3495|M.bovis_AF2122/97 --------------------------------