For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPG RPPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVA VLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWGAPVTVDRLDAFVEPDL CLAHFTPLEGAIR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2621c | - | - | 100% (224) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. tuberculosis H37Rv | Rv2618 | - | 1e-11 | 26.18% (191) | hypothetical protein Rv2618 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2654c | - | 1e-125 | 99.55% (224) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_3487 | - | 9e-27 | 36.41% (206) | putative transcriptional regulator |
M. leprae Br4923 | MLBr_00592 | - | 2e-06 | 28.27% (191) | putative DNA-binding protein |
M. abscessus ATCC 19977 | MAB_0215 | - | 2e-13 | 34.81% (181) | transcriptional regulator |
M. marinum M | MMAR_2081 | - | 8e-85 | 69.51% (223) | transcriptional regulator |
M. avium 104 | MAV_3499 | - | 2e-79 | 69.23% (221) | hypothetical protein MAV_3499 |
M. smegmatis MC2 155 | MSMEG_1125 | - | 2e-48 | 48.56% (208) | regulatory protein, ArsR |
M. thermoresistible (build 8) | TH_1819 | - | 1e-46 | 45.71% (210) | regulatory protein, ArsR |
M. ulcerans Agy99 | MUL_3263 | - | 6e-85 | 69.51% (223) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_5848 | - | 1e-69 | 62.68% (209) | putative transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Rv2621c|M.tuberculosis_H37Rv -------------------MGVS------VIIRSLQEPVGRRRAVLRALC Mb2654c|M.bovis_AF2122/97 -------------------MGVS------VIIRSLQEPVGRRRAVLRALC MMAR_2081|M.marinum_M -------------------MGE----GR--IARMGGEPAGRRRAVLRVLR MUL_3263|M.ulcerans_Agy99 -------------------MGE----GR--IARMGGEPAGRRRAVLRVLR MAV_3499|M.avium_104 -------------------MGDPLTKSRKLLAPSAGESAGRRRAVLRLLR Mvan_5848|M.vanbaalenii_PYR-1 -----------------------------MSAASPGEPPGRRRDVLRTLK MSMEG_1125|M.smegmatis_MC2_155 -----------------------------MDTDTSLPPRGRRDAILQVLR TH_1819|M.thermoresistible__bu -----------------------------MPAVAEPDTGGRRNEILRLLQ Mflv_3487|M.gilvum_PYR-GCK -----------------MNKEGLVLGPHPTRTVAGYPPLSRQRLCVLDYV MAB_0215|M.abscessus_ATCC_1997 -------------------------------MTGSRGAGQQRARVLKVLQ MLBr_00592|M.leprae_Br4923 MLNVHRGYPSLDRSPELRHTGVVKIRSELDAATTVAVSDGHTRRAVVRLL . : : Rv2621c|M.tuberculosis_H37Rv ASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPG---RGRPGR Mb2654c|M.bovis_AF2122/97 ASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPG---RGRPGR MMAR_2081|M.marinum_M ALGHPLSIVAIAEHLGVHPNTVRFHLDGLVDDGQVERVQPS---RRGPGR MUL_3263|M.ulcerans_Agy99 ALGHPLSIVAIAEHLGVHPNTVRFHLDGLVDDGQVERVQPS---RRGPGR MAV_3499|M.avium_104 ASPEPMSIAGIADVLGVHPNTVRFHLDSLVADGQVEHVELD---RKGPGR Mvan_5848|M.vanbaalenii_PYR-1 AASGPMSIGAIADALDIHPNTVRFHLDRLVSQGQVERIEPD---RRRPGR MSMEG_1125|M.smegmatis_MC2_155 ASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGE---AFGRGR TH_1819|M.thermoresistible__bu ESDTARGVAGLADELRVHPNTVRFHLNALVRTGDVEQVSGG---TAGPGR Mflv_3487|M.gilvum_PYR-GCK RTHAPVRITAVAAALDLHPNTVREHLDALTGHGLAERVTET---PSKRGR MAB_0215|M.abscessus_ATCC_1997 EAAAPVGAREVADSLGLHITTVRFHLKTLEEQGHIVRRGGTG--EQRAGR MLBr_00592|M.leprae_Br4923 LESGSITAGEISDRLGLSAAGVRRHLDVLIEMGDAESATAAPWQQVGRGR . :: * : ** **. * * ** Rv2621c|M.tuberculosis_H37Rv PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAER-DSRAMALSAGRAWGR Mb2654c|M.bovis_AF2122/97 PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAER-DSRAMALSAGRAWGR MMAR_2081|M.marinum_M PPLMFRAVQQMDRGGARHYQLLAEILSNGLAAES-DSVDKALAAGRAWGE MUL_3263|M.ulcerans_Agy99 PPLMFRAVQQMDRGGARHYQLLAEILSNGLAAES-DSVDKALAAGRAWGE MAV_3499|M.avium_104 PPLMFRAVRQMDRGGTRHYRLLAEILAKAFAAET-DPAPKALAAGRAWGQ Mvan_5848|M.vanbaalenii_PYR-1 PPQMFRAMPQMDRAGPRHYRLLAEMLAMSLAADG-DPPTRAQAGGRAWGR MSMEG_1125|M.smegmatis_MC2_155 PPVLYRASRRMDPSGPTNYRLLASILTGYVARHP-DAAAVAADLGRSTSP TH_1819|M.thermoresistible__bu PPVLFRAVRRMDPAGPTNYRLLADIMTSHFETNTDDPRAAAAELGRRWGP Mflv_3487|M.gilvum_PYR-GCK PAALYRPSAADPAIPAQDYAGLATALAGHIARTSTQPERDARAAGASWGH MAB_0215|M.abscessus_ATCC_1997 PSLSYAVAPRLD------YADVVALFAVHLGGTAAERESRAALVGADLAH MLBr_00592|M.leprae_Br4923 PAKHYRLTAVGRAKLGHAYDTLASAAMRQLREIGGEDAVRTFARQRIDAI *. : * :. . : : . Rv2621c|M.tuberculosis_H37Rv QLEA-----PPAGADTEETIDHLVAVLDDLGFAP-ERRAS--NGRQQVGL Mb2654c|M.bovis_AF2122/97 QLEA-----PPAGADTEETIDHLVAVLDDLGFAP-ERRAS--NGRQQVGL MMAR_2081|M.marinum_M RLQA-----PTTAHSAEKSIDHLVGVLDGLGFAP-ERRVS--DGQQQVAL MUL_3263|M.ulcerans_Agy99 RLQA-----PTTAHSAEKSIDHLVGVLDGLGFAP-ERRVS--DGQQQVAL MAV_3499|M.avium_104 QLDAERRRLPRDAAGAEQAIAQLVDVLDELGFAP-ERRVI--DGEQQVGL Mvan_5848|M.vanbaalenii_PYR-1 ELNVRAP--RRKQSGAEEAVDRLVEVLDDVGFVP-ERLGA--GEKQQIGL MSMEG_1125|M.smegmatis_MC2_155 GLVTTA---PHGPSTRTQAVTELVDLLAELGFEP-EPADG--RRAREIRL TH_1819|M.thermoresistible__bu SLVRRQ---PQGEPSRQETLAELTDVLADVGFRP-DPPVG--RSRPRITL Mflv_3487|M.gilvum_PYR-GCK ELCD-------DTVTTDDPRAAVLTVLARLGFGP-DADGP--DGS--IAL MAB_0215|M.abscessus_ATCC_1997 RVNVAR------RRTPLQVTDLVVETLGELGFTVRSTLMS--FGRVTVQI MLBr_00592|M.leprae_Br4923 LADVEP---AGGGADVEAAANRVASALSDAGYVATTARVGGPIHGVEICQ : * *: : Rv2621c|M.tuberculosis_H37Rv RHCPFLELAETQAGVVCPVHLGIMRGALQTWGAPVTVD-RLDAFVEP--D Mb2654c|M.bovis_AF2122/97 RHCPFLELAETQAGVVCPVHLGIMRGALQTW-APVTVD-RLDAFVEP--D MMAR_2081|M.marinum_M RHCPFLELAENRSGVVCPIHLGLMRGALESWGAPVTVE-RLDPFVEP--D MUL_3263|M.ulcerans_Agy99 RHCPFLELAENRSGVVCPIHLGLMRGALESWGAPVTVE-RLDPFVEP--D MAV_3499|M.avium_104 RHCPFLELAENSSNVVCPVHLGLMQGAMESWGAPVSVD-RLDPFVEP--D Mvan_5848|M.vanbaalenii_PYR-1 RHCPFLELAETQSRVVCGIHLGLMQGVLERQGAPVTVD-RLEPFAQP--D MSMEG_1125|M.smegmatis_MC2_155 RHCPFQNLAEEHGEVTCALHLGLMQGALRDLQAPVTVD-RLEPFVEP--D TH_1819|M.thermoresistible__bu RHCPFYELVTRYGETICGLHLGLMQGVLAAIRGPVSVA-GLDPLVEP--D Mflv_3487|M.gilvum_PYR-GCK RSCPLLEAARRYPAIVCQVHLGIVEGVLERFGAVTDTAPELVAFAEP--G MAB_0215|M.abscessus_ATCC_1997 CSCPLAEIATTAPEVVRGIQRGLIQEVLDVNADAIGGQFQVTVSPDAGHG MLBr_00592|M.leprae_Br4923 HHCPVSHVAEEFP--------ELCETEQQAIAEVLGTHVQRLAMIVNGDC **. . . : . Rv2621c|M.tuberculosis_H37Rv LCLAHFTPLEGAIR----- Mb2654c|M.bovis_AF2122/97 LCLAHFTPLEGAIR----- MMAR_2081|M.marinum_M LCLAHLS-PEGALS----- MUL_3263|M.ulcerans_Agy99 LCLAHLS-PEGALS----- MAV_3499|M.avium_104 LCLAHLT-LQGADR----- Mvan_5848|M.vanbaalenii_PYR-1 LCLAHLT-LRGRPPQA--- MSMEG_1125|M.smegmatis_MC2_155 LCVAHLAPR---------- TH_1819|M.thermoresistible__bu LCVAHLSTTPGWRRE---- Mflv_3487|M.gilvum_PYR-GCK ACRLFLPDPVVPERNRP-- MAB_0215|M.abscessus_ATCC_1997 DCTVNLALVPLGKESWPWT MLBr_00592|M.leprae_Br4923 ACTTHVPLMSVPSKT---- * ..