For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPV DTSAPGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWM VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLRSVDPHLRTRR VRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSH GEPLGSAAPEGLEGEFDDRIDERFPVFSSASLAEALPGPLTPMTLDVQLSGLRAAGRAMGRVLALGGVVA DEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTELLPFGRPQLAGGPLGSVAKV VVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILTVLWVIDTGVT AATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGNLASIRALSAPAAAAVDAVIA RIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAGTRSARELAHDTTIRFTHEL RMTLRELGSRRVAADVIDVVDDVFYLTCDELITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1868 | - | - | 100% (699) | hypothetical protein Rv1868 |
M. tuberculosis H37Rv | Rv2047c | - | 4e-70 | 31.84% (738) | hypothetical protein Rv2047c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1899 | - | 0.0 | 100.00% (699) | hypothetical protein Mb1899 |
M. gilvum PYR-GCK | Mflv_0493 | - | 7e-11 | 25.98% (435) | pyruvate, water dikinase |
M. leprae Br4923 | MLBr_00204 | rmlB2 | 5e-07 | 28.29% (152) | putative sugar-nucleotide dehydratase |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2747 | - | 0.0 | 79.77% (697) | hypothetical protein MMAR_2747 |
M. avium 104 | MAV_2850 | - | 0.0 | 70.01% (697) | hypothetical protein MAV_2850 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3007 | - | 0.0 | 78.91% (697) | hypothetical protein MUL_3007 |
M. vanbaalenii PYR-1 | Mvan_1818 | - | 3e-06 | 22.24% (499) | pyruvate, water dikinase |
CLUSTAL 2.0.9 multiple sequence alignment Rv1868|M.tuberculosis_H37Rv ----------MQILVTDATG--AVGRSVTRQLIAAGHTVSGIAQHPHDAL Mb1899|M.bovis_AF2122/97 ----------MQILVTDATG--AVGRSVTRQLIAAGHTVSGIAQHPHDAL MMAR_2747|M.marinum_M -------MSKVHVLVTDAAG--AIGRLVTRQLIAAGHTVSGISSHPHDYL MUL_3007|M.ulcerans_Agy99 ----------MHVLVTDAAG--AIGRLVTRQLIAAGHTVSGISSHPHDYL MAV_2850|M.avium_104 ----------MHILVTDATG--ALGRLVAGQLIAAGHTVTGIAELPHPCL Mflv_0493|M.gilvum_PYR-GCK MFDASSRIVDLADVLDDSFGGKALGLAELTRLGLPVPPGFVIADASGTSL Mvan_1818|M.vanbaalenii_PYR-1 ---MAPATIEFDDVTDDRFGGKAAGLAELRRIGLSVPVGFVIADASAHGA MLBr_00204|M.leprae_Br4923 -----MYGEPVRALVTGAAG--FIGSTLVDRLLADGHTVVGLDNFATG-- . : . * * :: : . . Rv1868|M.tuberculosis_H37Rv DPRVDYVCASLRNP------VLQELAGEADAVIHLAPVDTSAPGGVGITG Mb1899|M.bovis_AF2122/97 DPRVDYVCASLRNP------VLQELAGEADAVIHLAPVDTSAPGGVGITG MMAR_2747|M.marinum_M DPNVDFVCASLRNP------VLLELASEADAVIHLAPVEKGAPGAAGITG MUL_3007|M.ulcerans_Agy99 DPNVDFVCASLRNP------VLLELASEADAVIHLAPVEKGAPGAAGITG MAV_2850|M.avium_104 DGNVEFVCAPLRDR------VLRELTDEADAVIHLAPIDPTAPGNAAMDG Mflv_0493|M.gilvum_PYR-GCK GDAVTERFSRMRAAGQTPVAVRSSAAGEDGAEHSFAGQYDTVLGVGSVDE Mvan_1818|M.vanbaalenii_PYR-1 LDAAVDRFCQMAAEGVTPVAVRSSAVGEDGEDQSFAGQYDTVLGVASVDD MLBr_00204|M.leprae_Br4923 -------------------------------------------HAANLEH : Rv1868|M.tuberculosis_H37Rv LAHVANAAAR-AGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAP Mb1899|M.bovis_AF2122/97 LAHVANAAAR-AGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAP MMAR_2747|M.marinum_M LAHVSNAAAR-AGARLLFVSQAAGSPELYQQAETLVSTGWAPSLVIRIAP MUL_3007|M.ulcerans_Agy99 LAHVSNAAAR-AGARLLFVSQAAGSPELYQQAETLVSTGWAPSSVIRIAP MAV_2850|M.avium_104 LARVTDAAAR-AGSRLLFVSQAAGRPELYRPAEDLVASSWGPSVVVRIAP Mflv_0493|M.gilvum_PYR-GCK LTAAVEKCVRSAGSERAAAYQDGGAAARMHLVVQQMVDARAAGVVFTADP Mvan_1818|M.vanbaalenii_PYR-1 FTAAVRRCAGSVASQRASSYS-GHSPATMHVVVQQMVDARAAGVVFTADP MLBr_00204|M.leprae_Br4923 LASTPALAFV--------------EADIVTADLQTILDEHRPEVVFHLAA :: . . . : . *. . Rv1868|M.tuberculosis_H37Rv PVGR---------------------QLDWMVCRTVATLLRSKVSARPIRV Mb1899|M.bovis_AF2122/97 PVGR---------------------QLDWMVCRTVATLLRSKVSARPIRV MMAR_2747|M.marinum_M PVGR---------------------QLDWMVCRTVATLMRSKVSARPMRV MUL_3007|M.ulcerans_Agy99 PVGR---------------------QLDWTVCRTVTTLMRSKVSARPMRV MAV_2850|M.avium_104 PVGR---------------------QLDWMVCRTVATVLRTKVSAQPMRV Mflv_0493|M.gilvum_PYR-GCK TSGRRDLLVIDAVRGLGESLVDGSTASDHFVLTHAGDTVTTEASSQPALA Mvan_1818|M.vanbaalenii_PYR-1 ATGRRDLMVIDAIAGLGEALVDGSASPDHVVLNADGSTAVREVGTAPVLS MLBr_00204|M.leprae_Br4923 QIDVR----------------------------------HSVVDPQFDAS . ... Rv1868|M.tuberculosis_H37Rv LHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLR-----SVDPH Mb1899|M.bovis_AF2122/97 LHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLR-----SVDPH MMAR_2747|M.marinum_M LHLDDLVRFLVLALDTDRNGVVDLATPDTTNVVTAWRLLG-----SVDPR MUL_3007|M.ulcerans_Agy99 LHLDDLVRFLVLALDTDRNGVVDLATPDTTNVVTAWRLLG-----SIDPR MAV_2850|M.avium_104 LHLDDLMRFLVTALDTDRTGVVDLASPDTVNLVTAWRMLR-----ATDPR Mflv_0493|M.gilvum_PYR-GCK DDEIDRIRTGALLAAAHWGRPLDLEWAIDRDGLLWWLQARPITTLPGDPN Mvan_1818|M.vanbaalenii_PYR-1 SDDVAEIRSGALRAARHWGRPLDLEWAIDGTGKLWWLQARPITTLPGDLN MLBr_00204|M.leprae_Br4923 VNVIGTVRLAEAARHTGVRKIVHTSSGGS--------------------- . :* :. Rv1868|M.tuberculosis_H37Rv LRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDTGRGLVGRRLH Mb1899|M.bovis_AF2122/97 LRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDTGRGLVGRRLH MMAR_2747|M.marinum_M LRPHRVQGWSQLIPEMDIAAAQEDWNFQYGWQATDAIVDTGRGLVGRRLD MUL_3007|M.ulcerans_Agy99 LRPHRVQGWSQLIPEMDIAAAQEDWNFQYGWQATDAIVDTGRGLVGRRLD MAV_2850|M.avium_104 SRLHRVRSWSQLIPDLNVAAAQEDWLFEFGWHALDAVADTARGLVGRRLD Mflv_0493|M.gilvum_PYR-GCK EMDTPVTGPTHVYTRCNIGEMMPGAFCPLTASVSGHAIDYAMQMVQVAGG Mvan_1818|M.vanbaalenii_PYR-1 EMDSPVAGSDHVYTRCNIGEMMPGAFCPLTASVSGYAIDYAMQMTQVVAR MLBr_00204|M.leprae_Br4923 -----IYGTPSQYPTPETVPTDPTSPYAAGKVAGEIYLNTFRHLCGLDCS : . . : . : : Rv1868|M.tuberculosis_H37Rv PAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEG--------LEGEFD Mb1899|M.bovis_AF2122/97 PAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEG--------LEGEFD MMAR_2747|M.marinum_M PAGATIGSAQLALPVEPTPRLTPADGTALDSAAPDG--------LEGEFD MUL_3007|M.ulcerans_Agy99 PAGATIGSAQLALPVEPTPRLTPADGTALDSAAPDG--------LEGEFD MAV_2850|M.avium_104 TAGAINHGAQLALPVEVLP---QRAGNGAHSAAPEG--------VEGEFD Mflv_0493|M.gilvum_PYR-GCK VQERYEDRARQVGYFFGHMFLNMTEGTALSSGILGNSLEQFSLSVCGRVI Mvan_1818|M.vanbaalenii_PYR-1 AQPRYEKPWLQVGYFYGHMFLNLTEGTALSSGILGNSREQFSMSICGRVV MLBr_00204|M.leprae_Br4923 HIAPAN-----------------VYGPRQDPYGEAG--------VVAIFV * . . : . . Rv1868|M.tuberculosis_H37Rv DRIDERFPVFSSASLAEALPGPLTPMTLDVQLSGLRAAGRAMGRVLALGG Mb1899|M.bovis_AF2122/97 DRIDERFPVFSSASLAEALPGPLTPMTLDVQLSGLRAAGRAMGRVLALGG MMAR_2747|M.marinum_M DRIDPRFPVFSAASLAEALPGPLTPMTLDVQMSGLRAAGRAMGQVLALGD MUL_3007|M.ulcerans_Agy99 DRIDPRFPVFSAASLAEALPGPLTPMTLDVQMSGLRAAGRAMGQVLALGD MAV_2850|M.avium_104 DRIDPRFPVFSATALTDALPGPLTPITLDVQLSGLRTASRVLGRVLALGG Mflv_0493|M.gilvum_PYR-GCK DELEPGPPKPFVRKLINTVRLSTFALSSAPAIRRLPQTIAAFPPITSRDP Mvan_1818|M.vanbaalenii_PYR-1 DELEAKPPRPFARKLVNTVRLTSHALSAGPAIRRLADQIAGWPIPSHEDA MLBr_00204|M.leprae_Br4923 QALLSDRPTKVFGDGTHTRDYVFVDDVVDAFIKASGDAGGGQ-------- : : * .: : Rv1868|M.tuberculosis_H37Rv VVADEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQ Mb1899|M.bovis_AF2122/97 VVADEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQ MMAR_2747|M.marinum_M VVAEEWGSRAIAVFGHRPYVGVSANLVAATQLPGWNERAVTQQALGGNTQ MUL_3007|M.ulcerans_Agy99 VVAEEWGSRAIAVFGHRPYVGVSANLVAATQLPGWNERAVTQQALGGNTQ MAV_2850|M.avium_104 AVGEEWDSRAIAVFGHRPYVGVSVNMVAATQLPGWDQDAVARDALVGRPQ Mflv_0493|M.gilvum_PYR-GCK AVVLRHLEAGVDIYREVTLIHVRSSSRSAVAANVLESHLVRRAAKRGASD Mvan_1818|M.vanbaalenii_PYR-1 RLVLQQLESGVQLYCDVTLTHVRSSSRAAVAANILESTLVRQAVKNGRSE MLBr_00204|M.leprae_Br4923 ----------------------RFNIGTGIETSDRQLHTAVSAAVGGPDD . :. : . . : Rv1868|M.tuberculosis_H37Rv -VTELLPFGRPQLAGGPLGSVAKVVVTARSLALLRHLRSDTHHYVAAADA Mb1899|M.bovis_AF2122/97 -VTELLPFGRPQLAGGPLGSVAKVVVTARSLALLRHLRSDTHHYVAAADA MMAR_2747|M.marinum_M -VTELLPFGRPQLTGGPLRSAAKVLVTARSLSLLRHIRADTQAYVTAAAD MUL_3007|M.ulcerans_Agy99 -VTGLLPFGRPQLTGGPLRSAAKVLVTARSLSLLRHIRADTQAYVTAAAD MAV_2850|M.avium_104 -VGDPLPFGEPALAGGALGSIAKAVAAGRSVALLRHLRANTRDYCAAAVA Mflv_0493|M.gilvum_PYR-GCK -TAGSAEAIRLMTGAG-VESALMVEELTAVVSMLRRDGDAAARFLAAPAG Mvan_1818|M.vanbaalenii_PYR-1 -EEGQAEAARLMAGASDVESAMMLDQLQSVVRAIAADSGVATRFLAAAPD MLBr_00204|M.leprae_Br4923 PEFHPPRLGDLKRSCLDIGLATTVLGWSPQVQLDDGVRRTVEYFRAAQRS : : . : :* Rv1868|M.tuberculosis_H37Rv EHLAAGQLASLP--DAGLEVRIRLLRDRIHQGWILTVLWVIDTGVTAATL Mb1899|M.bovis_AF2122/97 EHLAAGQLASLP--DAGLEVRIRLLRDRIHQGWILTVLWVIDTGVTAATL MMAR_2747|M.marinum_M EHVGAEQLSTLP--DASLEVRIRLLRDRIHQGWILTALWVIDTGVTAATL MUL_3007|M.ulcerans_Agy99 EHVGAEQLSTLP--DASLEVRIRLLRDRIHQGWILTALWVIDTGVTAATL MAV_2850|M.avium_104 EQVDAAQLALLP--QAALEVRLRLLRDRIHQGWILNALWLLDTGITAAAL Mflv_0493|M.gilvum_PYR-GCK EAVTRLRAAETPSGAALRTFLDRHGHRGYRELCMRDPSWADDPDGLGAMM Mvan_1818|M.vanbaalenii_PYR-1 VAVVELQRADNASGEALRQFLLRHGHRGYRELCMRDPSWAQDAGGLGAMM MLBr_00204|M.leprae_Br4923 -------------------------------------------------- Rv1868|M.tuberculosis_H37Rv EHTRAGSAVSGGGMIMES-----------GRIGAEIAPLAAVLRADPPLC Mb1899|M.bovis_AF2122/97 EHTRAGSAVSGGGMIMES-----------GRIGAEIAPLAAVLRADPPLC MMAR_2747|M.marinum_M EHTRAGTSVSGVGVIMES-----------GRIAAEIAALTEILRADAPLC MUL_3007|M.ulcerans_Agy99 EHTRAGTSVSGVGVIMES-----------GRIAAETAALTEILRADAPLC MAV_2850|M.avium_104 VRSQAGQSVPGLGMITES-----------GLVAAETAELAAMLAADPPLC Mflv_0493|M.gilvum_PYR-GCK QVMLRGAAPENPAATAPSDPAQSRTLRVLARLAQAGARGREETKSRMALM Mvan_1818|M.vanbaalenii_PYR-1 QVMVRAASSDRQPAHSPTEAPTSPAIRFLARLAQGGARGREETKSKMALM MLBr_00204|M.leprae_Br4923 -------------------------------------------------- Rv1868|M.tuberculosis_H37Rv ALANDGNLASIRALSAPAAAAVDAVIARIGHR--------GLGEAELANL Mb1899|M.bovis_AF2122/97 ALANDGNLASIRALSAPAAAAVDAVIARIGHR--------GLGEAELANL MMAR_2747|M.marinum_M ALARDGNVDSIRALSASAAAALDATVARLAHR--------GCGEAELANP MUL_3007|M.ulcerans_Agy99 ALARDGNVDSIRALSASAAAALDATVARLAHR--------GCGEAELANP MAV_2850|M.avium_104 ALAADGNLASIRALAPKTAAAVDAAVARIGHR--------GPGDAELASQ Mflv_0493|M.gilvum_PYR-GCK AHLLKRGYRHLGEVLHEAGRLPDADLVFFFDRRELPLVVSGDDVTELVHR Mvan_1818|M.vanbaalenii_PYR-1 AHALKRGYRHLGEVLARSGRLPDADLVFFFDRSELPRVVGDDDISELVQS MLBr_00204|M.leprae_Br4923 -------------------------------------------------- Rv1868|M.tuberculosis_H37Rv TFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAG-----TRSARELAH Mb1899|M.bovis_AF2122/97 TFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAG-----TRSARELAH MMAR_2747|M.marinum_M SFGDDPALLLTAAAKAAAAPATPAAAPTLSQRLAAS-----ARGSRELAH MUL_3007|M.ulcerans_Agy99 SFGDDPALLLTAAAKAAAAPATPAAAPTLSQRLAAS-----ARGSRELAH MAV_2850|M.avium_104 TFADDPAMLLSAAAAAAAAPAEPAAPATLAERLAAN-----ARGSKELAH Mflv_0493|M.gilvum_PYR-GCK ARQRREALPFQAALEFGDVSVGRPTPIVR--AAVSGDGVVAGRPAGHGSV Mvan_1818|M.vanbaalenii_PYR-1 AVKRREALAYQDSLEFEDVSVGRPRPVVAPPVITSTADQVVGRPASRGTV MLBr_00204|M.leprae_Br4923 -------------------------------------------------- Rv1868|M.tuberculosis_H37Rv DTTIRFTHELRMTLRELGSRRVAADVIDVVDDVFYLTCDELITTPADARL Mb1899|M.bovis_AF2122/97 DTTIRFTHELRMTLRELGSRRVAADVIDVVDDVFYLTCDELITTPADARL MMAR_2747|M.marinum_M DTTIRFTHDLRMTLRELASRRVTADLMDTIDDVYYLTADELVTMPADARL MUL_3007|M.ulcerans_Agy99 DTTIRFTHDLRMTLRELASRRVTADLMDTIDDVYYLTADELVTMPADARL MAV_2850|M.avium_104 DATMRFTHELRMTLRALGSLRVEADLIDAVDDVYYLTCNELVTMPGDARL Mflv_0493|M.gilvum_PYR-GCK EGVVRVARSVVEARDLQPGEILVAPVTDVGWTPYFAVIAALVTDIGSSVS Mvan_1818|M.vanbaalenii_PYR-1 EGTVRVAKTIQDARDVQRGEILVAPVTDVGWTPYFTVIAALITDIGSSVS MLBr_00204|M.leprae_Br4923 -------------------------------------------------- Rv1868|M.tuberculosis_H37Rv R---IKRRRAERERLQAQRPPDVIDHAWVPVE------------- Mb1899|M.bovis_AF2122/97 R---IKRRRAERERLQAQRPPDVIDHAWVPVE------------- MMAR_2747|M.marinum_M R---IKRRRTERERLQAQHPPEVIDGNWNPAL------------- MUL_3007|M.ulcerans_Agy99 R---IKRRRTERERLQAQHPPEVIDGNWNPAL------------- MAV_2850|M.avium_104 R---IKRRRTERERLQVQCPPEVIDGRWTPPQHCAEGSPAQRPAG Mflv_0493|M.gilvum_PYR-GCK HGAVVAREYGLPCVVNTLVGTQVLRTGDRVRVDGDRGLVTVLDSP Mvan_1818|M.vanbaalenii_PYR-1 HGAVVAREYGLPCVVNTLVGTQVLRTGDRVRVDGDRGVVTRLG-- MLBr_00204|M.leprae_Br4923 ---------------------------------------------