For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv1218c (-)

annotation: PROBABLE TETRONASIN-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER
coordinates: 1361798 - 1362733
length: 311

SADNHQVPIEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSVRLLGG
DPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRGGIDNARRAELIERFGLDPTKKARTYSKGNR
QKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQRGVTVLLSSHILAETEALCEKVTIIRAG
KTVESGSLDALRHLSRTSIKAEMIGDPGDLSQIKGVEDISIEGTTVRAQVDSESLRELIQVLGHAGVRSL
VSQPPTLEELFLRHYSLGPEVAAEQQVATP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv1218c--100% (311)PROBABLE TETRONASIN-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER
M. tuberculosis H37RvRv1458c-9e-3236.99% (219) unidentified antibiotic-transport ATP-binding protein ABC
M. tuberculosis H37RvRv2936drrA3e-2929.97% (297) daunorubicin-DIM-transport ATP-binding protein ABC

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1250c-1e-17599.68% (311) tetronasin-transport ATP-binding protein ABC transporter
M. gilvum PYR-GCKMflv_2197-6e-9157.29% (288) ABC transporter related
M. leprae Br4923MLBr_00590-5e-3235.00% (220) putative ABC transporter ATP-binding protein
M. abscessus ATCC 19977MAB_1359c-6e-9862.28% (289) ABC transporter ATP-binding protein
M. marinum MMMAR_4220-1e-14582.58% (310) antibiotic ABC transporter ATP-binding protein
M. avium 104MAV_1362-1e-14388.54% (288) ABC transporter, ATP-binding protein
M. smegmatis MC2 155MSMEG_5075-2e-9158.62% (290) ABC transporter ATP-binding protein
M. thermoresistible (build 8)TH_2745-2e-9257.39% (291) PUTATIVE ABC transporter related
M. ulcerans Agy99MUL_2014drrA5e-3231.19% (295) daunorubicin-DIM-transport ATP-binding protein ABC
M. vanbaalenii PYR-1Mvan_4499-4e-9459.17% (289) ABC transporter-related protein

CLUSTAL 2.0.9 multiple sequence alignment


Rv1218c|M.tuberculosis_H37Rv        MSADN-----HQVPIEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNG
Mb1250c|M.bovis_AF2122/97           MSADN-----HQVPIEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNG
MMAR_4220|M.marinum_M               MATDI-----GSTPIEIRGLTKNFGSVRALDELDLTVREGEVHGFLGPNG
MAV_1362|M.avium_104                MATD------GFAPIEIRGLTKNFGAVRALDGLDLTVREGEVHGFLGPNG
Mflv_2197|M.gilvum_PYR-GCK          MPDTS-------PVVEIRGLRKAFGRTQALDGLDLAVAPGDVTGFLGPNG
Mvan_4499|M.vanbaalenii_PYR-1       MTDTG-------FAVDIHGLRKSFGHTKALDGLDLTVAPGDVAGFLGPNG
MSMEG_5075|M.smegmatis_MC2_155      MTRSS-------VAVEIHGLTKSFGRTRALDGLDMTVPYGHIVGFLGPNG
TH_2745|M.thermoresistible__bu      MTTTSPR-FDAEPAVEIHGLKKSFGRTRAVDGLDLRVERGSVAGFLGPNG
MAB_1359c|M.abscessus_ATCC_199      MTYPN-------LAVEIRGLTKLFGKTKALDGLDLSVAHGEVAGFLGPNG
MUL_2014|M.ulcerans_Agy99           MRNND-------LAVEVRGVRKAFGDVVALNDISFEVGRGEVIGLLGPNG
MLBr_00590|M.leprae_Br4923          MSSACTVPETPEVVIRLRGVCKHYGSILAVSNLDLDIHSAEVLALLGPNG
                                    *             : ::*: * :*   *:. :.: :  . : .:*****

Rv1218c|M.tuberculosis_H37Rv        AGKSTTLRILLGLVKADGGSVRLLGGDPWTDAVDLHRHIAYVPGDVTLWP
Mb1250c|M.bovis_AF2122/97           AGKSTTLRILLGLVKADGGSVRLLGGDPWTDAVDLHRHIAYVPGDVTLWP
MMAR_4220|M.marinum_M               AGKSTTIRILLGLVKADSGSVRLLGGNPWTDAVELHRQIAYVPGDVTLWP
MAV_1362|M.avium_104                AGKSTTIRILLGLVKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWP
Mflv_2197|M.gilvum_PYR-GCK          AGKSTAIRVLLGLLRADGGDVRLLGADPWRDAVALHRRIAYVPGDVTLWP
Mvan_4499|M.vanbaalenii_PYR-1       AGKSTTIRVLLGLLRADGGTVRLLGRDPWRDAVDLHRRIAYVPGDVTLWP
MSMEG_5075|M.smegmatis_MC2_155      AGKSTTIRVLLGLLRAERGTVRLLGGDPWHDAVELHRRIAYVPGDVMLWP
TH_2745|M.thermoresistible__bu      SGKSTTIRVLLGLLRADGGTARLLGGDPWHDAVELHRRLAYVPGDVTLWP
MAB_1359c|M.abscessus_ATCC_199      AGKSTTIRVLLGLLRADAGTVQLLGGDPWVNAVDLHRLIAYVPGDVTLWP
MUL_2014|M.ulcerans_Agy99           AGKTTMVDILSTLTRPDAGSAHVAGYDVVAQPAGVRRSIMVTGQQVAVDD
MLBr_00590|M.leprae_Br4923          AGKTTTVEMCEGFVRPDAGTIEVLGLDPITDNARLRARIGVMLQGGGGYP
                                    :**:* : :   : :.: *  .: * :   : . ::  :           

Rv1218c|M.tuberculosis_H37Rv        SLTGGETIDLLARMRGGI---DNARRAELIERFGLDPTKK--ARTYSKGN
Mb1250c|M.bovis_AF2122/97           SLTGGETIDLLARMRGGI---DNARRAELIERFGLDPTKK--ARTYSKGN
MMAR_4220|M.marinum_M               SLTGGEIIDLLARMRGGI---DQDRRAELIERFGLDPHKK--SRTYSKGN
MAV_1362|M.avium_104                SLTGGEIIDLLARMRGGI---DKRRRAELIERFDLDPHKK--ARTYSKGN
Mflv_2197|M.gilvum_PYR-GCK          NLTGMQAIDFLTALRGDG--VDTRRRDELIERFELDPHKK--ARTYSKGN
Mvan_4499|M.vanbaalenii_PYR-1       NLTGMQAIDFLAALRGDGT-VDTRRRDQLIERFELDPHKK--ARTYSKGN
MSMEG_5075|M.smegmatis_MC2_155      NLTGMQAIDFLCGLRGDG--VDVRRRNQLIDRFELDPHKK--ARTYSKGN
TH_2745|M.thermoresistible__bu      NLTGGQAIDFLAGLRDNF---DTKRRDELIERFELDPDKK--ARTYSKGN
MAB_1359c|M.abscessus_ATCC_199      NLTGGQAIDFLTRMLGTEH-ISIRRRNELIERFELDPTKK--ARTYSKGN
MUL_2014|M.ulcerans_Agy99           GLTGEQNLVLFGRLYGLRKSRARQRAQELLDQFGLTYAGKRLVRTYSGGM
MLBr_00590|M.leprae_Br4923          AARAGEMLNLVASYAADP-----LDPEWLLETLGLTDVARTTYRRLSGGQ
                                       . : : :.                 *:: : *    :   *  * * 

Rv1218c|M.tuberculosis_H37Rv        RQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQRGVTVLL
Mb1250c|M.bovis_AF2122/97           RQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQRGVTVLL
MMAR_4220|M.marinum_M               RQKVSLISAFSSRARLLLLDEPSSGLDPLMENVFQQCVDEARGRGVTVLL
MAV_1362|M.avium_104                RQKVSLISAFSSRARLLLLDEPSSGLDPLMENVFQQCVAQARDRGTTVLL
Mflv_2197|M.gilvum_PYR-GCK          RQKVAIVAAFSTRSELFILDEPTSGLDPLMEKTFQECVREVAGRGAAVLL
Mvan_4499|M.vanbaalenii_PYR-1       RQKVAIVAAFSTRSELFVLDEPTSGLDPLMEQAFQQCVHEVAGQGAAVLL
MSMEG_5075|M.smegmatis_MC2_155      RQKVAIIAAFSCEADLYILDEPTSGLDPLMEQAFQQCVTEVAGRGAAVLL
TH_2745|M.thermoresistible__bu      RQKVALVAAFSTNAEIYILDEPTSGLDPLMDKAFQMCVREAADNGAAVLL
MAB_1359c|M.abscessus_ATCC_199      RQKVALIAAFCSDADLFILDEPTSGLDPLMETVFQECVAEVSTRGCAVLL
MUL_2014|M.ulcerans_Agy99           RRRIDIACGLVVEPQVAFLDEPTTGLDPRSRQAIWDLVTSFKKLGIATLL
MLBr_00590|M.leprae_Br4923          QQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDTLRRDGVTVVL
                                    :::: : . :   . : .****::*:*.     .   :      * :.:*

Rv1218c|M.tuberculosis_H37Rv        SSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGD
Mb1250c|M.bovis_AF2122/97           SSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGD
MMAR_4220|M.marinum_M               SSHILAETEALCERITIIRAGRTVESGSLASMRHLSRTSIKAEMIGDPGD
MAV_1362|M.avium_104                SSHILAETEALCERVTIIRAGKTIESGSLSSMRHLSRTSIKAEMTGDPGD
Mflv_2197|M.gilvum_PYR-GCK          SSHILAEVEKLCDSVTIVRSGRTVRSGTLAQMRQFMRTTVTVRVRGDGRA
Mvan_4499|M.vanbaalenii_PYR-1       SSHILAEVEKLCDTVTIVRAGRTVRSGALAQMRHLMRTTVTARTRGDGEH
MSMEG_5075|M.smegmatis_MC2_155      SSHILAEVEKLCDDVTIIRSGRTVRSGTLAELRHLMRTTVTVRTHSDGRV
TH_2745|M.thermoresistible__bu      SSHILAEVERLCDSVTIIRSGRTVRAGRLDELRHLMRTTVKVRTRAPIDA
MAB_1359c|M.abscessus_ATCC_199      SSHILAEVEKLCHRVTIVRAGRTVLSGSLAELRHFMRTSVTVRTLANPSG
MUL_2014|M.ulcerans_Agy99           TTQYLEEADALSDRIILIDHGKIIADGTANELKHRAGDTFCEIVPRHLKD
MLBr_00590|M.leprae_Br4923          TTHQLKEAEELADRLVIIDHGRMIAAGTPTELMHTGAKDQLRFSAPPRLD
                                    ::: * *.: *.. : ::  *: :  *    : :                

Rv1218c|M.tuberculosis_H37Rv        LSQ--------IKGVEDISIEGTTV-RAQVDSESLRELIQVLG------H
Mb1250c|M.bovis_AF2122/97           LSR--------IKGVEDISIEGTTV-RAQVDSESLRELIQVLG------H
MMAR_4220|M.marinum_M               LTR--------IQGVEDVTVDGNTL-HVQVDSESLGELVRVLG------E
MAV_1362|M.avium_104                LRR--------IKGVEDISIEGNTL-RAQVDSESLGELIRVLG------D
Mflv_2197|M.gilvum_PYR-GCK          LVD--------APYVHDLRTDDGAL-RFSVDRDHLDRAVLDLT------A
Mvan_4499|M.vanbaalenii_PYR-1       LRQ--------APYVHDLRSDDGHL-RFSVDRDDLDRVMADLS------G
MSMEG_5075|M.smegmatis_MC2_155      LRD--------VPYVHDFDCRDGQL-RFSVDRTDLEFVMEHLI------D
TH_2745|M.thermoresistible__bu      LRT--------APYIHEFSTDDGLH-TFSVDRTDLDRTMTELT------T
MAB_1359c|M.abscessus_ATCC_199      LKS--------IPQLRDVTIGGNRA-SFTVDRSDLDRTMEQLA------G
MUL_2014|M.ulcerans_Agy99           LDATVAALGSLLPEHNRAMVTSESD-RITMPAPDGTRTLIEAARKIDEAN
MLBr_00590|M.leprae_Br4923          LSLLA------FALPEDYKTTELTPGEYLVAGPIDPQVLATVTAWCAQIN
                                    *              .             :        :           

Rv1218c|M.tuberculosis_H37Rv        AGVRSLVSQPPTLEELFLRHYS-LGPEVA-AEQQVATP----
Mb1250c|M.bovis_AF2122/97           AGVRSLVSQPPTLEELFLRHYS-LGPEVA-AEQQVATP----
MMAR_4220|M.marinum_M               AGVRSLVSQPPTLEELFLRHYS-VGPDGE-AQHRSGTGVAAR
MAV_1362|M.avium_104                AGVRSLVSQPPTLEELFLRHYDTSGTDGERGAHEAEVSLS--
Mflv_2197|M.gilvum_PYR-GCK          LGIEDLAVAPASLEDMFLQEYQGANR----------------
Mvan_4499|M.vanbaalenii_PYR-1       LGIDELTVAPASLEDMFLREYQGAGR----------------
MSMEG_5075|M.smegmatis_MC2_155      LGIDDLTVTPASLEDMFLREYQGAVP----------------
TH_2745|M.thermoresistible__bu      LGIEELTVTPASLEDLFLREYQEVPR----------------
MAB_1359c|M.abscessus_ATCC_199      LGIVDLSVAPASLEELFMREYQGASR----------------
MUL_2014|M.ulcerans_Agy99           IELADIALRRPSLDDVFLSMTTDPSEAHVLSHVASGAML---
MLBr_00590|M.leprae_Br4923          VLTTNMRVEQHSLEDVFLDLTGRKLR----------------
                                        .:     :*:::*: