For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SCCHHSGLDGDTAFTVDASRVTFGRGCLAEVGDRAAALGIHRVALFSDPTVATLEIFDTVQRSLREAGVE VVSYPDARVEPTDESFKQAAAFATDVNPDGYVSVGGGSVIDTAKAANLYASHPADFLEYVNAPVGAGAAV PGPLRPHIACPTTSGTGSEVTGIAIFDLLAMAAKTGIASPALRPTEALVDPDCTDTLPASVVACSGLDVL SHALESYTARPYRRRAVTGRPSRRPMSQGANPWSDLGSLEALRLLGRYLERAVTDAADREAREQVMWAAT LAGIAFGNAGVHIPHAMAYAVAGQVHDFHPPEYPGDEPMVPHGMSVVLNAPAAFRLTAPTDPVRHLEAAR QLGADAADAGPEDAGTVLAEHLIRIMRAVGMPNGLAGVGYSETDAAALADGAWPQQRLLNNAPIDVDKAW LADTFRRALNYW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5811 | - | - | 100% (433) | iron-containing alcohol dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_5476 | - | 1e-37 | 29.61% (412) | iron-containing alcohol dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_0443 | - | 6e-30 | 28.91% (384) | bifunctional acetaldehyde-CoA/alcohol dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1025 | - | 0.0 | 81.76% (433) | iron-containing alcohol dehydrogenase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4110 | - | 7e-31 | 29.02% (386) | aldehyde dehydrogenase |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1392 | - | 3e-38 | 29.81% (359) | alcohol dehydrogenase, class IV |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3976 | - | 5e-30 | 30.75% (322) | bifunctional acetaldehyde-CoA/alcohol dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4110|M.marinum_M MTTTPTESASPVEAPAIDNLRTAEIDAIVDTAAEAARAFRKLDQQQVDAI
MUL_3976|M.ulcerans_Agy99 MTTTPTESASPVEAPAIDNLRTAEIDAIVDTAAEAARAFRKLDQQQVDAI
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M VEAMVRAGVRAAGELAGVAIEETGFGVFEDKVVKNYVATEFLHDYLRGKK
MUL_3976|M.ulcerans_Agy99 VEAMVRAGVRAAGELAGVAIEETGFGVFEDKVVKNYVATEFLHDYLRGKK
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M SVGVIDEDVEHNIVYVAEPIGVVLGITPVTNPTSTVLFKAIVAAKTRNAI
MUL_3976|M.ulcerans_Agy99 SVGVIDEDVEHNIVYVAEPIGVVLGITPVTNPTSTVLFKAIVAAKTRNAI
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M LFRPSPYAVRCCEQSIEILRTAAEAAGMPPGALQVIPDAAHEVTHYLFKH
MUL_3976|M.ulcerans_Agy99 LFRPSPYAVRCCEQSIEILRTAAEAAGMPPGALQVIPDAAHEVTHYLFKH
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M PKVDFIWVTGGPKIVALANSAGKPGLSVGPGNAPIYIHKTADLKGAVVDI
MUL_3976|M.ulcerans_Agy99 PKVDFIWVTGGPKIVALANSAGKPGLSVGPGNAPIYIHKTADLKGAVVDI
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M LISKTFDSSVICPAEQTCIIDDEIYDEMIAEFERMGAQLLTADQAKAVAE
MUL_3976|M.ulcerans_Agy99 LISKTFDSSVICPAKQTCIIDDEIYDEMIAEFERMGAQLLTADQAKAVAE
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_4110|M.marinum_M FAFGCGDKVSLDAVGQKAPELAARAGFSVPPTVKVLLAQLPSDLGELAAH
MUL_3976|M.ulcerans_Agy99 FAFGCGDKVSLDAVGQKAPELAARAGFSVPPTVKVPLAQLPSDLDELAAH
MSMEG_1392|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 -------------------------------------MSCCHHSGLDGDT
Mflv_1025|M.gilvum_PYR-GCK ---------------------------------MASVMSCCHTG--DGDG
MMAR_4110|M.marinum_M PLVQEKLMPVLGVVRARSVQHGIDAAVLVTEHGGLGHTSAIYANDDDVIE
MUL_3976|M.ulcerans_Agy99 PLVQEKLMPVLGVVRARSVQHGIDAAVLVTEHGGLGHTSAIYANDDDVIE
MSMEG_1392|M.smegmatis_MC2_155 -MVTNIALPRFAKIGAG---------------------------------
Mvan_5811|M.vanbaalenii_PYR-1 AFTVDASRVTFGRG---------------------------------CLA
Mflv_1025|M.gilvum_PYR-GCK AFTVDASRVTFGRG---------------------------------CIA
:. : :.
MMAR_4110|M.marinum_M AYGLAVRTGRILVNAPTAVGALGGVYNNLTPTFSLGCGTWGGSSTTENVN
MUL_3976|M.ulcerans_Agy99 AYGLAVRTGRILVNAPTAVGALGGVYNNLTPTFSLGCGTWGGSSTTENVN
MSMEG_1392|M.smegmatis_MC2_155 -----------------AADTLG---------------------------
Mvan_5811|M.vanbaalenii_PYR-1 EVG-----------------------------------------------
Mflv_1025|M.gilvum_PYR-GCK EVG-----------------------------------------------
MMAR_4110|M.marinum_M YRQLLNIKTVSRRRTPPQWFRVPSNTYFNEGALDNLRELDCETVVVVTDA
MUL_3976|M.ulcerans_Agy99 YRQLLNIKTVSRRRTPPQWFRVPSNTYFNEGALDNLRELDCETVVVVTDA
MSMEG_1392|M.smegmatis_MC2_155 ---------------------------------EVIADLGISRPVLVTDR
Mvan_5811|M.vanbaalenii_PYR-1 ---------------------------------DRAAALGIHRVALFSDP
Mflv_1025|M.gilvum_PYR-GCK ---------------------------------DRARALGITRAALFSDS
: *. .:.:*
MMAR_4110|M.marinum_M LTEERGVVEALRGKLRAQ--HVQVFSEVTPEPDETTIRRGVALMQRVQPD
MUL_3976|M.ulcerans_Agy99 LTEERGVVEALRGKLRAQ--HVQVFSEVTPEPDETTIRRGVALMQRVQPD
MSMEG_1392|M.smegmatis_MC2_155 YLVETGQAERLAKTLHAAGSTAAVFSDTVPDPTVESLSAGLELVRAHRAD
Mvan_5811|M.vanbaalenii_PYR-1 TVATLEIFDTVQRSLREAGVEVVSYPDARVEPTDESFKQAAAFATDVNPD
Mflv_1025|M.gilvum_PYR-GCK AVAQLEVFDAAQRSLRAAGIDVVDYIDVRVEPTDESFRSAAAFATEASPD
: .*: . : :. :* :: . : .*
MMAR_4110|M.marinum_M LLIAIGGGSVLDAGKAMRLFYEHPEKSLDALTMPFLDPRKRVADYPTDRH
MUL_3976|M.ulcerans_Agy99 LLIAIGGGSVLDAGKAMRLFYEHPEKSLDALTMPFLDPRKRVADYPTDRH
MSMEG_1392|M.smegmatis_MC2_155 GIIGFGGGSPMDTAKALAVLSANGG-----------DIASYKAPSSYTGP
Mvan_5811|M.vanbaalenii_PYR-1 GYVSVGGGSVIDTAKAANLYASHPADFLEYVN------APVGAGAAVPGP
Mflv_1025|M.gilvum_PYR-GCK GYISVGGGSVIDTAKAANLYATHPADFLEYVN------APVGAGAPVPGP
:..**** :*:.** : : * .
MMAR_4110|M.marinum_M RIQLVAVPTTSGTGSEVSPAAVLTVGGKKETLVD--YSLVPDLAIVDPVL
MUL_3976|M.ulcerans_Agy99 RIQLVAVPTTSGTGSEVSPAAVLTVGGKKETLVD--YSLVPDLAIVDPVL
MSMEG_1392|M.smegmatis_MC2_155 ALPIVAVPTTAGSGSEATQFTVITDGETDEKMLCPGLSFLPIAIVVDYEL
Mvan_5811|M.vanbaalenii_PYR-1 LRPHIACPTTSGTGSEVTGIAIFDLLAMAAKTGIASPALRPTEALVDPDC
Mflv_1025|M.gilvum_PYR-GCK LAPHIACPTTSGTGSEVTGIAIFDLLSMAAKTGIASPALRPTEALVDPDC
:* ***:*:***.: ::: . :: * :**
MMAR_4110|M.marinum_M TSSMPQKLTADTGIDALTHALEAIVS------------------IFASPY
MUL_3976|M.ulcerans_Agy99 TSSMPQKLTADIGIDALTHALEAIVS------------------IFASPY
MSMEG_1392|M.smegmatis_MC2_155 TVSMPARLTADTGVDALTHAIEAYVS------------------RRAGGF
Mvan_5811|M.vanbaalenii_PYR-1 TDTLPASVVACSGLDVLSHALESYTARPYRRRAVTGRPSRRPMSQGANPW
Mflv_1025|M.gilvum_PYR-GCK TGTLPATVVACSGLDVLSHALESYTARPYTHRAAPARPTQRPMSQGANPW
* ::* :.* *:*.*:**:*: .: *. :
MMAR_4110|M.marinum_M TDALCAQAVRLIFDALPRAYDDPDDLSARTSMSNAATLAGLAFSNAFVGT
MUL_3976|M.ulcerans_Agy99 TDALCAQAVRLIFDALPRAYDDPDDLSARTSMSNAATLAGLAFSNAFVGT
MSMEG_1392|M.smegmatis_MC2_155 SDALALAAMQSISKHLRRAYVDGDDREAREAMMLASTQAGMAFSNSSVAL
Mvan_5811|M.vanbaalenii_PYR-1 SDLGSLEALRLLGRYLERAVTDAADREAREQVMWAATLAGIAFGNAGVHI
Mflv_1025|M.gilvum_PYR-GCK SDLGCGEALRLLGTYLARAVADASDSEAREQVMWAATLAGIAFGNAGVHL
:* . *:: : * ** * * .** : *:* **:**.*: *
MMAR_4110|M.marinum_M NHALAHAVGAKFS-------------VPHGRANGIFLPHVLRYNASLPTK
MUL_3976|M.ulcerans_Agy99 NHTLAHAVGAKFS-------------VPHGRANGIFLPHVLRYNASLPTK
MSMEG_1392|M.smegmatis_MC2_155 VHGMSRPIGGHFH-------------VAHGLSNAMLLPAVTRFSVESAIG
Mvan_5811|M.vanbaalenii_PYR-1 PHAMAYAVAGQVHDFHPPEYPGDEPMVPHGMSVVLNAPAAFRLTAPTDPV
Mflv_1025|M.gilvum_PYR-GCK PHAMAYAVAGQVRDFRPVGYPDSEPLVPHGMSVILNAPAAFRLTAHTDPA
* :: .:..:. *.** : : * . * ..
MMAR_4110|M.marinum_M FMPAPGYSAYIAPDKYAQLGQLVFGGHLPDDSRQRLFAGVDDLLDRLDMP
MUL_3976|M.ulcerans_Agy99 FMPAPGYSAYIAPDKYAQLGQLVFGGHLPDDSRQRLFAGVDDLLDRLDMP
MSMEG_1392|M.smegmatis_MC2_155 RYADCARAMGIVGAAVADR-----------DAASELVTELERLCADVEVP
Mvan_5811|M.vanbaalenii_PYR-1 RHLEAARQLGADAADAGPE-----------DAGTVLAEHLIRIMRAVGMP
Mflv_1025|M.gilvum_PYR-GCK RHLFAAARLGADTADAAPE-----------DAGTVLAEHLMTIMRQVGMP
. . *: * : : : :*
MMAR_4110|M.marinum_M RSLREFGVDEQEFLAALP-TLAMTAFEDLSNRTNPRMPLVSEITDLLRLG
MUL_3976|M.ulcerans_Agy99 RSLREFGVDEQGFLVALP-TLAMTAFEDLSNRTNPRMPLVSEITDLLRLG
MSMEG_1392|M.smegmatis_MC2_155 -TPRSYGIDEKDWEARLP-TMAEQALASGSPQNNPRVPTHDEIVALYREI
Mvan_5811|M.vanbaalenii_PYR-1 NGLAGVGYSETDAAALADGAWPQQRLLNNAPIDVDKAWLADTFRRALNYW
Mflv_1025|M.gilvum_PYR-GCK NGLAGVGYTDADAAALADGAWPQQRLLANAPIDVDKPLLANAFEQSMRYW
* : . : . : : : . : .
MMAR_4110|M.marinum_M YYGDTGVGEPALAPIKPGDVDGRSV
MUL_3976|M.ulcerans_Agy99 YYGDTGVGEPALAPIKPGDVDGRSV
MSMEG_1392|M.smegmatis_MC2_155 Y------------------------
Mvan_5811|M.vanbaalenii_PYR-1 -------------------------
Mflv_1025|M.gilvum_PYR-GCK -------------------------