For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDSYQLGSYSVGRVGFGAMQLPGPGVFGPPRDHDQAIAVLRRAVELGINHIDTAQIYGPNVANELIREAL HPYPADLALVSKVGGKRDAQGNWLPAQEPDDLYDQLEENLRTLDTDRLAAVNLRVFGSAGGAGPADLNRA LFDRQLSTMIRARDEGLIAGIGLSNIGVDHLRIALERTEIVCVQNAYNLVDRTSQPVLELCLEHGVAFVP FFPLGSGFVPDNPVLNHPAVVREARNLGRTPAQIALAWTLSVAPNVLLIPGTSSVTHLEENTAVRDVELD DETRRELDEAAH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5463 | - | - | 100% (292) | aldo/keto reductase |
M. vanbaalenii PYR-1 | Mvan_2555 | - | 3e-53 | 41.96% (286) | aldo/keto reductase |
M. vanbaalenii PYR-1 | Mvan_1769 | - | 6e-14 | 26.20% (271) | 2,5-didehydrogluconate reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2320 | - | 1e-11 | 27.22% (316) | hypothetical protein Mb2320 |
M. gilvum PYR-GCK | Mflv_1329 | - | 1e-137 | 82.47% (291) | aldo/keto reductase |
M. tuberculosis H37Rv | Rv2298 | - | 1e-11 | 27.22% (316) | hypothetical protein Rv2298 |
M. leprae Br4923 | MLBr_00458 | - | 2e-55 | 43.71% (286) | putative oxidoreductase |
M. abscessus ATCC 19977 | MAB_4120c | - | 2e-23 | 29.51% (305) | aldo/keto reductase |
M. marinum M | MMAR_2086 | - | 3e-56 | 44.06% (286) | oxidoreductase |
M. avium 104 | MAV_0482 | - | 1e-108 | 68.94% (293) | putative oxidoreductase YdbC |
M. smegmatis MC2 155 | MSMEG_2475 | - | 1e-113 | 72.92% (277) | putative oxidoreductase YdbC |
M. thermoresistible (build 8) | TH_1525 | - | 2e-15 | 27.37% (274) | 2,5-diketo-D-gluconic acid reductase A |
M. ulcerans Agy99 | MUL_2745 | - | 5e-13 | 26.67% (315) | hypothetical protein MUL_2745 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5463|M.vanbaalenii_PYR-1 ----------------------MDSYQLG-SYSVGRVGFGAMQLPGPG-V Mflv_1329|M.gilvum_PYR-GCK ----------------------MDTFPLG-SHTVGRVGFGAMQLPGPG-V MSMEG_2475|M.smegmatis_MC2_155 --------------------MGASTFALG-SFTVHRVGFGAMQLPGPH-V MAV_0482|M.avium_104 ----------------------MDHVQLG-RYSLARIGFGAMQLPGSG-G MLBr_00458|M.leprae_Br4923 MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKG-V MMAR_2086|M.marinum_M ------------------MAAASATLTLGGDLTVNRLGFGAMRLTGDG-V MAB_4120c|M.abscessus_ATCC_199 ----------------------MKHTWLG-ELSVSRIGLGAMSMSAYYRA Mb2320|M.bovis_AF2122/97 ----------------------MKYLDVDGIGQVSRIGLGTWQFGSREWG Rv2298|M.tuberculosis_H37Rv ----------------------MKYLDVDGIGQVSRIGLGTWQFGSREWG MUL_2745|M.ulcerans_Agy99 ----------------------MKHLEVDGIGNVSRIGLGTWQFGSREWG TH_1525|M.thermoresistible__bu -----------------VNMTTVPAITLNNGAQIPQVGFGVYQIPPDQ-- :. : ::*:*. : Mvan_5463|M.vanbaalenii_PYR-1 FGPPR--DHDQAIAVLRRAVELGINHIDTAQIYGPNVANELIREALHPYP Mflv_1329|M.gilvum_PYR-GCK FGPPR--DHDQALAVLRRVVELGINHIDTAQIYGPNVANELIREALHPYA MSMEG_2475|M.smegmatis_MC2_155 FGPPR--DHDQAIAVLRRAIELGVDHIDTAQFYGPDVANELIYEALHPYP MAV_0482|M.avium_104 FGPPR--DRDQALAVLRRAVELGVDHIDTAQFYGPDVANELIREALHPYP MLBr_00458|M.leprae_Br4923 WGPPV--DRYEAVRVLRRAVELGVNFIDTADSYGPYVSEEIIAEALHPYK MMAR_2086|M.marinum_M WGPPA--DRAEAVRVLRRAAELGVNFIDTADSYGPYVSEEIIHEALHPYT MAB_4120c|M.abscessus_ATCC_199 IGSESGPDEATSIDTLRRALDLGVSLIDTAEIYGPFVNEELVGRAIAGRR Mb2320|M.bovis_AF2122/97 YGDRY--ATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGDDR Rv2298|M.tuberculosis_H37Rv YGDRY--ATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGDDR MUL_2745|M.ulcerans_Agy99 YGDRY--ASGAARDIVARACALGVTLFDTAEVYGLGKSERILGEALGDER TH_1525|M.thermoresistible__bu -----------TAAAVRTALDAGYRHIDTAQMYGNERGVAEGIRDAGLDR : : . * :***: ** . Mvan_5463|M.vanbaalenii_PYR-1 ADLALVSKVGGKRDAQGN-WLPAQEPDDLYDQLEENLRTLDTDRLAAVNL Mflv_1329|M.gilvum_PYR-GCK DGLALVSKVGGRRDEQGN-WLPAQDPDDLRRQLEENLSTLDTDRLAAVNL MSMEG_2475|M.smegmatis_MC2_155 ENLAIVSKVGGTRDDQAN-WLPAQEPEQLRKDIETNLHTLKVDQLAAVNL MAV_0482|M.avium_104 DQLAIVSKVGARRDDRGG-MHPAQQRDDLRRGIEDNLRTLGVGQLAAVNL MLBr_00458|M.leprae_Br4923 G-LVIATKAGLLRTGRDV-WIPLGNPSYLRQELEMSLRRLNVDTIDLFQL MMAR_2086|M.marinum_M G-LVIATKAGLLRTGPGV-WVPLGNPSYLRQECEMSLRRLGVDTIDLFQL MAB_4120c|M.abscessus_ATCC_199 DEVVLATKFGLVSHGNGASQVLDSTPGNISTAVEGSLRRLGVDHIDLYYQ Mb2320|M.bovis_AF2122/97 TEVVVASKVFP----------VAPFPAVIKNRERASARRLQLNRIPLYQI Rv2298|M.tuberculosis_H37Rv TEVVVASKVFP----------VAPFPAVIKNRERASARRLQLNRIPLYQI MUL_2745|M.ulcerans_Agy99 AEVVVASKIMP----------VAPFPAVVKQRERASARRLQLDRIPLYQI TH_1525|M.thermoresistible__bu GEVFITSKLNN----------PYHRPDDARRAFDRTLTELGSDYVDLFLI : :.:* . * . : Mvan_5463|M.vanbaalenii_PYR-1 RVFG-SAGGAGPADLNRALFDRQLSTMIRARDEGLIAGIGLSNIGVDHLR Mflv_1329|M.gilvum_PYR-GCK RAFN-HDDPSLPAVLDRDLFDRQLTAMIAARDEGLIAGIGLSNVSADHLR MSMEG_2475|M.smegmatis_MC2_155 RVFD-DPDG---RAVNRELFERQLDAMIAARDEGLIGGIGLSNIVCEHLE MAV_0482|M.avium_104 RIVDPDSLRSTRPALDRKQFEQQLTAMIEARDEGLIGGIGLSNITVEHLR MLBr_00458|M.leprae_Br4923 HRID-----------PNFPLADQVGELFTLKNEGKIRHIGLSEINLDQLT MMAR_2086|M.marinum_M HRID-----------RNYPLADQVGELLALKNEGKIRHIGLSEIDVDQLE MAB_4120c|M.abscessus_ATCC_199 HRVD-----------PNVAIEDTIGAVAELVQQGKVRYIGLSEAAAGTIR Mb2320|M.bovis_AF2122/97 HQPN-----------PVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWR Rv2298|M.tuberculosis_H37Rv HQPN-----------PVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWR MUL_2745|M.ulcerans_Agy99 HQPN-----------PVVPDSVIMPGIRELLDIGRIGAAGVSNYSLARWK TH_1525|M.thermoresistible__bu HWPLP--------MHYDGDFVSTWKTLEEFAADGRARSIGVSNFEPAHLD : : * *:*: Mvan_5463|M.vanbaalenii_PYR-1 IALERT--EIVCVQNAYNLVDR-TSQPVLELCLEHGVAFVPFFPLGSGFV Mflv_1329|M.gilvum_PYR-GCK VALERT--EIVCVQNAYNLLDR-TSQPVLDLSAEHGIAFVPFFPLGSGFV MSMEG_2475|M.smegmatis_MC2_155 IALQRT--DIVCVQNAYNIADR-TSQPVLDLCTERGIAFVPFFPLGSAFV MAV_0482|M.avium_104 FALERT--EIVCVQNAYNLVDR-AAQPVLDECTARGIAFVAYFPLGSGFS MLBr_00458|M.leprae_Br4923 AAQQIT--EIVSVQNMYNLSAR-AAEPLLDAVTSRGIGFIPWSPLAAGPL MMAR_2086|M.marinum_M AAQQIT--EIVSVQNMYNLAAR-GAEPLLEAATSQGIAFIPWFPLASGPL MAB_4120c|M.abscessus_ATCC_199 RAHAVH--PITALQNEYSLWTRDIEDEILPTIRELGIGLVAYSPLGRGFL Mb2320|M.bovis_AF2122/97 KADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLL Rv2298|M.tuberculosis_H37Rv KADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLL MUL_2745|M.ulcerans_Agy99 KADAALGRPVVSNQVHFSLAHPGPLDDLVPFAERENRIIIAYSPLAQGLL TH_1525|M.thermoresistible__bu LLAAET--STVPAVNQVEIHPYFGNNDVRRYCAEHGIAVEAWAPIAKGRV . .: : : . . .: *:. . Mvan_5463|M.vanbaalenii_PYR-1 PDNP--------------------------VLNHPAVVREARNLGRTPAQ Mflv_1329|M.gilvum_PYR-GCK ADNP--------------------------VLKHPAVVREAEKLGRTPAQ MSMEG_2475|M.smegmatis_MC2_155 PDNP--------------------------VLGNPTVKKLAGELGYTPAQ MAV_0482|M.avium_104 TDNP--------------------------VLGNPALRRAAVRLDATPAQ MLBr_00458|M.leprae_Br4923 AAP------------------------------DGPLQRIAVNHHATPSQ MMAR_2086|M.marinum_M AAP------------------------------DGPLRKIADDHHATPSQ MAB_4120c|M.abscessus_ATCC_199 TGAIGSRDQLAEGDFRREQPRFSAENFDANLALVEEVRSVASSIGATSAQ Mb2320|M.bovis_AF2122/97 GGKYG--LENRPGGVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQ Rv2298|M.tuberculosis_H37Rv GGKYG--LENRPGGVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQ MUL_2745|M.ulcerans_Agy99 GGKYG--VDNRPAGVRAVNPLFGTENLRRIEPLLQTLRAVAIDVDAKPAQ TH_1525|M.thermoresistible__bu ADDP-------------------------------VIAGIADRLGRTPAQ : * ..:* Mvan_5463|M.vanbaalenii_PYR-1 IALAWTLSVAPNVLLIPGTSSVTHLEENTAVRDVELDDETRRELDEAAH- Mflv_1329|M.gilvum_PYR-GCK IVLAWTLSVAPNVLLIPGTSSVAHLEQNTAVRDITLDDDTRRDLDAAA-- MSMEG_2475|M.smegmatis_MC2_155 IALAATLSLAPNILLIPGTSSVAHLEENIAVADIELPADATF-------- MAV_0482|M.avium_104 IALAWTLSVAPSIALIPGTSSVGHLEENLAAADITLDAETRAELAEAAP- MLBr_00458|M.leprae_Br4923 LALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGAQ MMAR_2086|M.marinum_M LALAWLLKRSPVMLPIPGTSRVAHLQENVAAAEIVLSDQEFEALSVAGAA MAB_4120c|M.abscessus_ATCC_199 VALAWLLARGDDIVPIPGTTKVSRVNENVGAVDIELLPEHLVRLECLAAA Mb2320|M.bovis_AF2122/97 VALAWLIS-LPGVVAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARA Rv2298|M.tuberculosis_H37Rv VALAWLIS-LPGVVAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARA MUL_2745|M.ulcerans_Agy99 VALAWLIS-LPGVVAIPGASSVEQLEFNVAAADIELSADARAALTEAARA TH_1525|M.thermoresistible__bu VTLRWHIQ--RGDIVLPKSVTPERVRSNIALFDFELSDADMAAISALDKG :.* : :* : ::. * . :. * Mvan_5463|M.vanbaalenii_PYR-1 --------------------- Mflv_1329|M.gilvum_PYR-GCK --------------------- MSMEG_2475|M.smegmatis_MC2_155 --------------------- MAV_0482|M.avium_104 --------------------- MLBr_00458|M.leprae_Br4923 --------------------- MMAR_2086|M.marinum_M HGG------------------ MAB_4120c|M.abscessus_ATCC_199 AGDRYNAEHLARLEG------ Mb2320|M.bovis_AF2122/97 FRPVSTGRFLTDMVREKVSRR Rv2298|M.tuberculosis_H37Rv FRPVSTGRFLTDMVREKVSRR MUL_2745|M.ulcerans_Agy99 FHPVSARRFLTDTVREKLGRR TH_1525|M.thermoresistible__bu EAGRMGPHPDKFDMI------